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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 2
  • mitochondrion 2
  • cytosol 2
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, nucleus
BaCelLo:nucleus
iPSORT:mitochondrion
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:nucleus
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra020738.1-P Field mustard cytosol, nucleus, plastid 92.57 98.59
CDX86348 Canola cytosol, nucleus, plastid 92.31 91.1
CDX85290 Canola cytosol, nucleus, plastid 92.04 90.84
CDY45906 Canola cytosol 51.72 87.44
AT3G30380.1 Thale cress cytosol 88.86 83.96
KRG93729 Soybean cytosol 71.09 70.9
GSMUA_Achr9P22720_001 Banana plastid 19.1 70.59
Solyc02g065700.2.1 Tomato cytosol 52.52 70.46
KRH18325 Soybean cytosol, nucleus, peroxisome 70.03 69.84
PGSC0003DMT400003495 Potato plastid 69.76 69.76
Solyc02g089320.2.1 Tomato plastid 66.31 69.64
KRH01428 Soybean plastid 69.76 69.21
PGSC0003DMT400068320 Potato cytosol 50.93 68.33
KRH45145 Soybean plastid 68.44 67.54
CDY31930 Canola cytosol 11.14 65.62
OQU76743 Sorghum cytosol, mitochondrion 54.38 64.87
GSMUA_Achr10P... Banana plastid 59.95 63.84
CDY20302 Canola cytosol 44.3 63.26
CDY37504 Canola cytosol 12.73 63.16
CDY37505 Canola cytosol, extracellular 11.14 62.69
TraesCS7B01G293000.1 Wheat plastid 63.4 62.4
TraesCS7A01G391300.1 Wheat plastid 63.4 62.4
TraesCS7D01G386800.1 Wheat plastid 63.13 62.14
GSMUA_Achr3P28090_001 Banana cytosol, nucleus, plastid 63.4 62.08
PGSC0003DMT400068318 Potato plastid 18.57 61.95
CDY28238 Canola cytosol 48.28 61.9
CDX68717 Canola cytosol 48.28 61.9
CDX72285 Canola cytosol 48.01 61.56
CDY13406 Canola cytosol 47.75 61.22
CDY55247 Canola cytosol 47.75 61.22
CDY03421 Canola cytosol 58.09 61.0
CDX91066 Canola plastid 53.05 60.98
CDY51485 Canola cytosol 47.21 60.54
CDY34778 Canola cytosol 47.21 60.54
Os02t0190800-01 Rice plasma membrane 62.33 60.41
CDY23273 Canola cytosol 46.95 60.2
CDY34308 Canola cytosol 58.36 60.11
TraesCS6D01G160600.1 Wheat plastid 62.6 59.9
TraesCS6B01G199000.1 Wheat plastid 62.6 59.9
TraesCS6A01G170900.1 Wheat plastid 62.86 59.85
CDY20301 Canola cytosol 46.68 59.66
HORVU6Hr1G034870.2 Barley plastid 62.6 59.15
CDY09851 Canola plastid 57.56 58.65
CDY27016 Canola plastid 53.05 58.48
CDX69584 Canola endoplasmic reticulum 57.29 58.38
CDY32850 Canola cytosol 53.05 58.14
EES06425 Sorghum plastid 62.86 57.95
CDY51065 Canola plastid 52.79 57.85
VIT_14s0083g00800.t01 Wine grape plastid 67.37 57.73
HORVU7Hr1G092460.1 Barley plastid 63.4 57.59
CDY28668 Canola cytosol, endoplasmic reticulum, nucleus, plastid 54.64 57.06
CDY28862 Canola cytosol, endoplasmic reticulum, nucleus, plastid 54.64 57.06
CDY46139 Canola cytosol 37.4 55.95
Zm00001d046660_P001 Maize plastid 62.07 55.58
CDX85599 Canola cytosol 38.46 55.56
CDX98113 Canola plastid 53.58 55.49
CDX77081 Canola plastid 31.03 55.45
Zm00001d015656_P001 Maize plastid 63.4 55.32
CDY56180 Canola plastid 53.05 55.1
CDY11031 Canola cytosol, plastid 33.16 52.3
TraesCS7B01G196600.1 Wheat cytosol 56.76 52.2
TraesCS7D01G284300.3 Wheat cytosol 56.76 52.2
KXG25721 Sorghum cytosol 56.5 51.7
CDX92650 Canola cytosol 59.42 51.61
Zm00001d052810_P001 Maize cytosol 56.5 50.96
Zm00001d053705_P001 Maize cytosol 29.18 50.93
HORVU7Hr1G061990.5 Barley cytosol, nucleus, plastid 58.36 49.22
CDY35552 Canola plastid 44.3 47.85
Zm00001d012172_P001 Maize mitochondrion 28.12 45.3
CDY22593 Canola plastid 44.56 40.88
CDY12257 Canola plastid 44.56 40.88
CDY43012 Canola plastid 44.56 38.98
CDY53272 Canola plastid 15.65 37.58
Protein Annotations
EnsemblPlants:CDY35777EnsemblPlantsGene:GSBRNA2T00059235001Gene3D:3.40.50.1820InterPro:AB_hydrolaseInterPro:AB_hydrolase_1InterPro:IPR029058
PANTHER:PTHR12277PANTHER:PTHR12277:SF124PFAM:PF00561ProteinID:CDY35777ProteinID:CDY35777.1SEG:seg
SUPFAM:SSF53474UniParc:UPI0004EEFC42UniProt:A0A078HD70MapMan:35.2::
Description
BnaC02g38170DBnaC02g38170D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HD70]
Coordinates
chrLK032360:-:171365..173514
Molecular Weight (calculated)
42282.4 Da
IEP (calculated)
9.390
GRAVY (calculated)
-0.544
Length
377 amino acids
Sequence
(BLAST)
001: MGGVTSSMAA KFAFFPPNPP SYGVEVAAET RKLRLTGVEN VKENVEVLKL KTKRGNQVVA AYIKNPTASL TLLYSHGNAA DLGQMFELFS ELSLHLRVNL
101: IGYDYSGYGR SSGKPSEQNT YYDIEAVYRC LEEQYNVKEQ DVILYGQSVG SGPTLELASR LPNLRAVVLH SAIASGLRVM YPVKRTYWFD IYKNVDKIST
201: VKCPVLVIHG TSDDVVKWSH GKQLFDLCKE KYEPLWIKGG NHCDLELYPQ YIKHLKKFVS AVEKSPHQGQ ACVPPQTEKA RSSTDVREPA RPSTDQREKS
301: RTSMDQREMP KLSTESKDQA RASVDKRERT RKSVDGNATE QQIQTEKARN SIDRFGGLIR SVSLCNIDCF KPTATAK
Best Arabidopsis Sequence Match ( AT3G30380.2 )
(BLAST)
001: MGAVTSSMAA KFAFFPPNPP SYGVEVVEGK LRLIGVENVK ENVEVLKLKT KRGNQVVAAY IKNPTASLTL LYSHGNAADL GQMFELFSEL SLHLRVNLIG
101: YDYSGYGRSS GKPSEQNTYS DIEAVYRCLE EKYGVKEQDV ILYGQSVGSG PTLELASRLP NLRAVVLHSA IASGLRVMYP VKRTYWFDIY KNVEKISFVK
201: CPVLVIHGTS DDVVNWSHGK QLFELCKEKY EPLWIKGGNH CDLELYPQYI KHLRKFVSAI EKSPILRNGP VPLTEKARSS TDIREPARPS TDQRDKSRTS
301: TDQREMPKLS TDIARASVDK RERTRRSVDG TEKPSNSAEQ QLVQPEKGRN SIDRFGEMIR SVGFCNIDCF KPTATAK
Arabidopsis Description
Alpha/beta-Hydrolases superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9LI62]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.