Factsheet for VIT_14s0083g00800.t01

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 2
plastid 3
mitochondrion 2
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc02g065700.2.1	Tomato	cytosol	48.18	75.44
PGSC0003DMT400068320	Potato	cytosol	47.05	73.67
Solyc02g089320.2.1	Tomato	plastid	58.18	71.31
PGSC0003DMT400003495	Potato	plastid	60.23	70.29
VIT_14s0219g00290.t01	Wine grape	cytosol, endoplasmic reticulum, nucleus	58.41	69.84
KRH01428	Soybean	plastid	59.77	69.21
KRG93729	Soybean	cytosol	59.32	69.05
KRH45145	Soybean	plastid	59.77	68.85
Bra020738.1-P	Field mustard	cytosol, nucleus, plastid	55.23	68.64
Bra025415.1-P	Field mustard	cytosol, nucleus, plastid	59.32	68.5
VIT_01s0010g00670.t01	Wine grape	plastid	59.09	68.42
CDX85290	Canola	cytosol, nucleus, plastid	59.32	68.32
CDX86348	Canola	cytosol, nucleus, plastid	59.32	68.32
KRH18325	Soybean	cytosol, nucleus, peroxisome	58.64	68.25
OQU76743	Sorghum	cytosol, mitochondrion	48.41	67.41
CDY35777	Canola	cytosol	57.73	67.37
GSMUA_Achr9P22720_001	Banana	plastid	15.45	66.67
PGSC0003DMT400068318	Potato	plastid	17.05	66.37
VIT_11s0149g00410.t01	Wine grape	cytosol	30.91	65.7
VIT_17s0000g09740.t01	Wine grape	cytosol, endoplasmic reticulum, nucleus	57.5	65.37
GSMUA_Achr10P...	Banana	plastid	52.27	64.97
GSMUA_Achr3P28090_001	Banana	cytosol, nucleus, plastid	56.82	64.94
TraesCS7D01G386800.1	Wheat	plastid	56.14	64.49
TraesCS7B01G293000.1	Wheat	plastid	55.91	64.23
TraesCS7A01G391300.1	Wheat	plastid	55.91	64.23
AT3G30380.1	Thale cress	cytosol	57.73	63.66
VIT_14s0006g02620.t01	Wine grape	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	49.09	63.16
VIT_02s0012g02180.t01	Wine grape	mitochondrion, vacuole	28.86	61.65
Os02t0190800-01	Rice	plasma membrane	53.64	60.67
TraesCS6D01G160600.1	Wheat	plastid	53.41	59.64
TraesCS6B01G199000.1	Wheat	plastid	53.41	59.64
TraesCS6A01G170900.1	Wheat	plastid	53.64	59.6
HORVU7Hr1G092460.1	Barley	plastid	55.91	59.28
HORVU6Hr1G034870.2	Barley	plastid	53.64	59.15
VIT_11s0206g00050.t01	Wine grape	cytosol	32.05	58.75
EES06425	Sorghum	plastid	54.32	58.44
Zm00001d046660_P001	Maize	plastid	54.55	57.01
CDY45906	Canola	cytosol	28.41	56.05
Zm00001d015656_P001	Maize	plastid	54.77	55.79
TraesCS7D01G284300.3	Wheat	cytosol	50.68	54.39
TraesCS7B01G196600.1	Wheat	cytosol	50.68	54.39
Zm00001d053705_P001	Maize	cytosol	25.91	52.78
KXG25721	Sorghum	cytosol	49.32	52.67
Zm00001d052810_P001	Maize	cytosol	49.09	51.67
HORVU7Hr1G061990.5	Barley	cytosol, nucleus, plastid	51.59	50.78
Zm00001d012172_P001	Maize	mitochondrion	24.32	45.73
VIT_19s0015g01840.t01	Wine grape	plasma membrane	20.0	31.43

Protein Annotations

EntrezGene:100244582	wikigene:100244582	Gene3D:3.40.50.1820	MapMan:35.2	InterPro:AB_hydrolase	EMBL:AM458023
ProteinID:CAN83201	ProteinID:CAN83201.1	ProteinID:CCB44078	ProteinID:CCB44078.1	UniProt:F6GVU3	EMBL:FN594955
GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0006810	GO:GO:0008150	GO:GO:0008272
GO:GO:0015116	GO:GO:0016020	GO:GO:0016021	GO:GO:1902358	InterPro:IPR029058	EntrezGene:LOC100244582
wikigene:LOC100244582	PANTHER:PTHR12277	PANTHER:PTHR12277:SF124	SUPFAM:SSF53474	UniParc:UPI0001984B2A	ArrayExpress:VIT_14s0083g00800
EnsemblPlantsGene:VIT_14s0083g00800	EnsemblPlants:VIT_14s0083g00800.t01	RefSeq:XP_003633749	RefSeq:XP_003633749.1	RefSeq:XP_010660554.1	:

Description

No Description!

Coordinates

chr14:-:23001150..23005055

Molecular Weight (calculated)

49408.1 Da

IEP (calculated)

9.720

GRAVY (calculated)

-0.690

Length

440 amino acids

Sequence
(BLAST)

001: MGGVKSSLAS KFAFCPPKPP SYGLAVDEST GRLTMSGVPS RENVDILKLC TKRGNEIVAM YMRNPAATLT LLYSHGNAAD LGQMYELLSE LSVHLPVNLL
101: TYDYSGYGKS TGKPSEHNTY ADVEAAYRCL EEIYGVKEED VILYGQSLGS GPTIDLAVRL SRLRAVVLHS AILSGLRVLY PVKRTYWFDI FKNIDKIPLV
201: KCPVLVIHGT ADDVVDFSHG KQLWELCKEK YEPLWIKGGN HCDLELYPQF IRHLKKFISA MEKSAHLINC SGPVADLSGN PQNSTDCIEK SRQSIDQREK
301: SMPSTDQIEK RRPSIDHREK SRTSIDKSEK SRTSTDKREK SRTSTDKREK SRTSTDKRER TRTSTDKKEK SRTSTDKREK LRTSIDKREK PRKSMDGREK
401: ACAGTDQPEK ARKSIDRLGG MMRSVGLCNI GCFKHNVSGG

Best Arabidopsis Sequence Match ( AT3G30380.2 )
(BLAST)

001: MGAVTSSMAA KFAFFPPNPP SYGVEVVEGK LRLIGVENVK ENVEVLKLKT KRGNQVVAAY IKNPTASLTL LYSHGNAADL GQMFELFSEL SLHLRVNLIG
101: YDYSGYGRSS GKPSEQNTYS DIEAVYRCLE EKYGVKEQDV ILYGQSVGSG PTLELASRLP NLRAVVLHSA IASGLRVMYP VKRTYWFDIY KNVEKISFVK
201: CPVLVIHGTS DDVVNWSHGK QLFELCKEKY EPLWIKGGNH CDLELYPQYI KHLRKFVSAI EKSPILRNGP VPLTEKARSS TDIREPARPS TDQRDKSRTS
301: TDQREMPKLS TDIARASVDK RERTRRSVDG TEKPSNSAEQ QLVQPEKGRN SIDRFGEMIR SVGFCNIDCF KPTATAK

Arabidopsis Description

Alpha/beta-Hydrolases superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9LI62]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.