Factsheet for PGSC0003DMT400003495

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 1
mitochondrion 2
cytosol 1
plastid 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc02g089320.2.1	Tomato	plastid	91.25	95.82
PGSC0003DMT400068320	Potato	cytosol	62.07	83.27
PGSC0003DMT400068318	Potato	plastid	23.34	77.88
GSMUA_Achr9P22720_001	Banana	plastid	19.36	71.57
Bra020738.1-P	Field mustard	cytosol, nucleus, plastid	66.58	70.9
KRH01428	Soybean	plastid	71.09	70.53
CDX86348	Canola	cytosol, nucleus, plastid	71.35	70.42
KRG93729	Soybean	cytosol	70.29	70.11
Bra025415.1-P	Field mustard	cytosol, nucleus, plastid	70.82	70.08
CDX85290	Canola	cytosol, nucleus, plastid	70.82	69.9
CDY35777	Canola	cytosol	69.76	69.76
KRH45145	Soybean	plastid	70.29	69.37
KRH18325	Soybean	cytosol, nucleus, peroxisome	69.5	69.31
OQU76743	Sorghum	cytosol, mitochondrion	57.56	68.67
PGSC0003DMT400017818	Potato	cytosol	65.78	66.85
GSMUA_Achr10P...	Banana	plastid	62.6	66.67
TraesCS7D01G386800.1	Wheat	plastid	67.37	66.32
TraesCS7B01G293000.1	Wheat	plastid	67.37	66.32
TraesCS7A01G391300.1	Wheat	plastid	67.11	66.06
PGSC0003DMT400039199	Potato	cytosol	64.99	66.04
GSMUA_Achr3P28090_001	Banana	cytosol, nucleus, plastid	67.11	65.71
AT3G30380.1	Thale cress	cytosol	69.5	65.66
Os02t0190800-01	Rice	plasma membrane	64.46	62.47
PGSC0003DMT400067845	Potato	cytosol, plastid	55.7	61.95
TraesCS6B01G199000.1	Wheat	plastid	64.72	61.93
TraesCS6A01G170900.1	Wheat	plastid	64.72	61.62
TraesCS6D01G160600.1	Wheat	plastid	64.19	61.42
HORVU7Hr1G092460.1	Barley	plastid	67.37	61.2
PGSC0003DMT400006272	Potato	plastid	55.17	61.0
HORVU6Hr1G034870.2	Barley	plastid	64.46	60.9
VIT_14s0083g00800.t01	Wine grape	plastid	70.29	60.23
EES06425	Sorghum	plastid	64.99	59.9
Zm00001d046660_P001	Maize	plastid	65.52	58.67
PGSC0003DMT400008297	Potato	cytosol	45.09	57.63
Zm00001d015656_P001	Maize	plastid	64.72	56.48
CDY45906	Canola	cytosol	32.63	55.16
TraesCS7D01G284300.3	Wheat	cytosol	59.95	55.12
TraesCS7B01G196600.1	Wheat	cytosol	59.68	54.88
KXG25721	Sorghum	cytosol	59.95	54.85
PGSC0003DMT400050553	Potato	cytosol	53.85	54.72
Zm00001d052810_P001	Maize	cytosol	58.36	52.63
PGSC0003DMT400062645	Potato	mitochondrion	55.17	52.53
HORVU7Hr1G061990.5	Barley	cytosol, nucleus, plastid	60.48	51.01
Zm00001d053705_P001	Maize	cytosol	29.18	50.93
Zm00001d012172_P001	Maize	mitochondrion	29.18	47.01
PGSC0003DMT400006166	Potato	plasma membrane, plastid	44.83	43.33

Protein Annotations

EnsemblPlants:PGSC0003DMT400003495	EnsemblPlantsGene:PGSC0003DMG400001382	EntrezGene:102596926	Gene3D:3.40.50.1820	InterPro:AB_hydrolase	InterPro:Hydrolase_4
InterPro:IPR029058	PANTHER:PTHR12277	PANTHER:PTHR12277:SF124	PFAM:PF12146	PGSC:PGSC0003DMG400001382	RefSeq:XP_006338321.1
RefSeq:XP_006338322.1	SEG:seg	SUPFAM:SSF53474	UniParc:UPI000295635F	UniProt:M0ZLS7	MapMan:35.2

Description

Protein bem46 [Source:PGSC_GENE;Acc:PGSC0003DMG400001382]

Coordinates

chr2:-:45243717..45250124

Molecular Weight (calculated)

42219.5 Da

IEP (calculated)

8.356

GRAVY (calculated)

-0.388

Length

377 amino acids

Sequence
(BLAST)

001: MGAVTSSMAA KFAFFPPNPP SYGVVVEEST GKLKLTEVAA KENVDILKLP TKKGTEIVAV YIRNPAAMLT VLYSHGNAAD LGQMYELFIE LSHLLRVNLM
101: GYDYSGYGRS TGKPSEQNTY ADIEAAYRCL EETYGVKEED VILYGQSVGS GPTLDLASRL SRLRAVVLHS PILSGLRVMY AVKRTYWFDI YKNIDKIPLV
201: ECPVLIIHGT ADDVVDCSHG KQLFELSKQK YEPLWVKTGN HCDLELFPEY IIHLKKFISA IEKSTSFRNV SALCMNQIDK PRSSTDCRPR PSTDQREKSR
301: LSTEKIEPRT STDQRDKSRA SIDRKEKSSK SVDLSDKAND NTEQSEKARK SIDRFGNMMR SAVLCNIDCF KPVGANV

Best Arabidopsis Sequence Match ( AT3G30380.2 )
(BLAST)

001: MGAVTSSMAA KFAFFPPNPP SYGVEVVEGK LRLIGVENVK ENVEVLKLKT KRGNQVVAAY IKNPTASLTL LYSHGNAADL GQMFELFSEL SLHLRVNLIG
101: YDYSGYGRSS GKPSEQNTYS DIEAVYRCLE EKYGVKEQDV ILYGQSVGSG PTLELASRLP NLRAVVLHSA IASGLRVMYP VKRTYWFDIY KNVEKISFVK
201: CPVLVIHGTS DDVVNWSHGK QLFELCKEKY EPLWIKGGNH CDLELYPQYI KHLRKFVSAI EKSPILRNGP VPLTEKARSS TDIREPARPS TDQRDKSRTS
301: TDQREMPKLS TDIARASVDK RERTRRSVDG TEKPSNSAEQ QLVQPEKGRN SIDRFGEMIR SVGFCNIDCF KPTATAK

Arabidopsis Description

Alpha/beta-Hydrolases superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9LI62]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.