Factsheet for Bra025415.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid, nucleus, cytosol

Predictor Summary:

nucleus 2
cytosol 1
plastid 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX86348	Canola	cytosol, nucleus, plastid	97.64	97.38
Bra020738.1-P	Field mustard	cytosol, nucleus, plastid	86.09	92.66
AT3G30380.1	Thale cress	cytosol	89.76	85.71
Solyc02g065700.2.1	Tomato	cytosol	53.28	72.24
KRG93729	Soybean	cytosol	71.39	71.96
KRH18325	Soybean	cytosol, nucleus, peroxisome	70.34	70.9
PGSC0003DMT400003495	Potato	plastid	70.08	70.82
Solyc02g089320.2.1	Tomato	plastid	66.4	70.47
PGSC0003DMT400068320	Potato	cytosol	51.71	70.11
KRH01428	Soybean	plastid	69.82	70.0
GSMUA_Achr9P22720_001	Banana	plastid	18.37	68.63
KRH45145	Soybean	plastid	68.77	68.59
OQU76743	Sorghum	cytosol, mitochondrion	55.12	66.46
GSMUA_Achr10P...	Banana	plastid	60.63	65.25
Bra030401.1-P	Field mustard	cytosol	46.19	64.71
Bra037774.1-P	Field mustard	cytosol	46.19	64.71
Bra034043.1-P	Field mustard	cytosol	46.19	64.71
TraesCS7B01G293000.1	Wheat	plastid	64.3	63.97
TraesCS7A01G391300.1	Wheat	plastid	64.3	63.97
PGSC0003DMT400068318	Potato	plastid	18.9	63.72
TraesCS7D01G386800.1	Wheat	plastid	64.04	63.71
Bra011242.1-P	Field mustard	cytosol	48.56	62.93
Bra024028.1-P	Field mustard	cytosol	48.03	62.24
Os02t0190800-01	Rice	plasma membrane	63.25	61.95
Bra032105.1-P	Field mustard	cytosol	47.77	61.9
Bra007861.1-P	Field mustard	cytosol	47.77	61.9
GSMUA_Achr3P28090_001	Banana	cytosol, nucleus, plastid	62.47	61.82
Bra010259.1-P	Field mustard	cytosol	47.51	61.56
TraesCS6B01G199000.1	Wheat	plastid	62.47	60.41
EES06425	Sorghum	plastid	64.83	60.39
Bra013831.1-P	Field mustard	cytosol	58.01	60.38
TraesCS6A01G170900.1	Wheat	plastid	62.73	60.35
TraesCS6D01G160600.1	Wheat	plastid	62.2	60.15
Bra008761.1-P	Field mustard	endoplasmic reticulum	58.27	60.0
HORVU6Hr1G034870.2	Barley	plastid	62.47	59.65
VIT_14s0083g00800.t01	Wine grape	plastid	68.5	59.32
HORVU7Hr1G092460.1	Barley	plastid	64.3	59.04
Bra028401.1-P	Field mustard	plastid	52.76	58.43
Zm00001d015656_P001	Maize	plastid	65.09	57.41
Zm00001d046660_P001	Maize	plastid	62.2	56.29
Bra040729.1-P	Field mustard	plastid	16.27	54.87
Bra019712.1-P	Field mustard	cytosol	38.32	54.48
Bra014940.1-P	Field mustard	cytosol	11.55	54.32
Bra004197.1-P	Field mustard	cytosol	11.55	54.32
Bra023463.1-P	Field mustard	cytosol	39.11	54.18
Zm00001d053705_P001	Maize	cytosol	30.45	53.7
TraesCS7D01G284300.3	Wheat	cytosol	56.43	52.44
TraesCS7B01G196600.1	Wheat	cytosol	56.17	52.2
Bra040701.1-P	Field mustard	plastid	43.57	51.08
KXG25721	Sorghum	cytosol	54.59	50.49
Zm00001d052810_P001	Maize	cytosol	55.38	50.48
HORVU7Hr1G061990.5	Barley	cytosol, nucleus, plastid	58.53	49.89
Zm00001d012172_P001	Maize	mitochondrion	27.82	45.3
Bra023247.1-P	Field mustard	plastid	43.83	40.63
Bra019211.1-P	Field mustard	nucleus	58.01	40.04
Bra033847.1-P	Field mustard	plastid	44.62	39.53

Protein Annotations

EnsemblPlants:Bra025415.1	EnsemblPlants:Bra025415.1-P	EnsemblPlantsGene:Bra025415	Gene3D:3.40.50.1820	InterPro:AB_hydrolase	InterPro:AB_hydrolase_1
InterPro:IPR029058	PANTHER:PTHR12277	PANTHER:PTHR12277:SF124	PFAM:PF00561	SEG:seg	SUPFAM:SSF53474
UniParc:UPI000253FA66	UniProt:M4E9F9	MapMan:35.2	:	:	:

Description

AT3G30380 (E=3e-168) | INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Alpha/beta hydrolase fold-1 (InterPro:IPR000073); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G01690.1).

Coordinates

chrA06:-:21654223..21656132

Molecular Weight (calculated)

42513.7 Da

IEP (calculated)

9.291

GRAVY (calculated)

-0.507

Length

381 amino acids

Sequence
(BLAST)

001: MGAVTSSMAA KFAFFPPNPP SYGVEVAEET GKLRLTGVEN VKENVEVLKL KTKRGNQVVA AYIKNAKASL TLLYSHGNAA DLGQMFELFS ELSLHLRVNL
101: IGYDYSGYGR SSGKPSEQNT YHDIEAVYRC LEEQYGVKEQ DVILYGQSVG SGPTLELASR LPNLRAVVLH SAIASGIRVM YPVKRTYWFD IYKNIDKISL
201: VKCPVLVVHG TSDDVVNWSH GKQLFDLCKE KYEPLWIKGG NHCDLELYPQ YIKHLKKFVS AVEKSPHLPS GTVPQTEKAR SSTDVRESSR PSIDQREKSR
301: TSADQREMPK LSTESKDIAR ASVDKRERTR KSVDGCEKPS NATEQQIQPE KGRKSIDRFG GMIRSVGLCN IDCFKPTATA K

Best Arabidopsis Sequence Match ( AT3G30380.2 )
(BLAST)

001: MGAVTSSMAA KFAFFPPNPP SYGVEVVEGK LRLIGVENVK ENVEVLKLKT KRGNQVVAAY IKNPTASLTL LYSHGNAADL GQMFELFSEL SLHLRVNLIG
101: YDYSGYGRSS GKPSEQNTYS DIEAVYRCLE EKYGVKEQDV ILYGQSVGSG PTLELASRLP NLRAVVLHSA IASGLRVMYP VKRTYWFDIY KNVEKISFVK
201: CPVLVIHGTS DDVVNWSHGK QLFELCKEKY EPLWIKGGNH CDLELYPQYI KHLRKFVSAI EKSPILRNGP VPLTEKARSS TDIREPARPS TDQRDKSRTS
301: TDQREMPKLS TDIARASVDK RERTRRSVDG TEKPSNSAEQ QLVQPEKGRN SIDRFGEMIR SVGFCNIDCF KPTATAK

Arabidopsis Description

Alpha/beta-Hydrolases superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9LI62]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.