Factsheet for Bra014940.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

extracellular 2
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
cytosol 2
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid, secretory
BaCelLo:	secretory
MultiLoc:	cytosol
Plant-mPloc:	plastid
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra004197.1-P	Field mustard	cytosol	92.59	92.59
Bra040729.1-P	Field mustard	plastid	54.32	38.94
Bra034043.1-P	Field mustard	cytosol	90.12	26.84
Bra037774.1-P	Field mustard	cytosol	90.12	26.84
Bra030401.1-P	Field mustard	cytosol	90.12	26.84
Bra028401.1-P	Field mustard	plastid	75.31	17.73
GSMUA_Achr8P17940_001	Banana	plastid	66.67	15.74
TraesCS3D01G262400.2	Wheat	plastid	64.2	14.44
HORVU3Hr1G064120.3	Barley	plastid	64.2	14.36
TraesCS3B01G295700.1	Wheat	plastid	64.2	14.33
TraesCS3A01G262400.1	Wheat	plastid	62.96	14.01
EES01292	Sorghum	plastid	62.96	13.78
Zm00001d011624_P001	Maize	plastid	62.96	13.78
Os01t0689800-01	Rice	plastid	61.73	13.74
Zm00001d043801_P002	Maize	plastid	61.73	13.51
Bra024028.1-P	Field mustard	cytosol	48.15	13.27
Bra007861.1-P	Field mustard	cytosol	46.91	12.93
Bra011242.1-P	Field mustard	cytosol	46.91	12.93
Bra013831.1-P	Field mustard	cytosol	58.02	12.84
Bra020738.1-P	Field mustard	cytosol, nucleus, plastid	55.56	12.71
Bra008761.1-P	Field mustard	endoplasmic reticulum	58.02	12.7
Bra010259.1-P	Field mustard	cytosol	44.44	12.24
Bra032105.1-P	Field mustard	cytosol	41.98	11.56
Bra025415.1-P	Field mustard	cytosol, nucleus, plastid	54.32	11.55
Bra023247.1-P	Field mustard	plastid	45.68	9.0
Bra033847.1-P	Field mustard	plastid	46.91	8.84
Bra019211.1-P	Field mustard	nucleus	58.02	8.51
Bra040701.1-P	Field mustard	plastid	23.46	5.85
Zm00001d042401_P001	Maize	plastid	27.16	4.55
Bra023463.1-P	Field mustard	cytosol	4.94	1.45
Bra019712.1-P	Field mustard	cytosol	2.47	0.75

Protein Annotations

EnsemblPlants:Bra014940.1	EnsemblPlants:Bra014940.1-P	EnsemblPlantsGene:Bra014940	PANTHER:PTHR12277	PANTHER:PTHR12277:SF118	SEG:seg
UniParc:UPI0002540E70	UniProt:M4DEL8	MapMan:35.2	:	:	:

Description

AT1G66900 (E=9e-031) | INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; BEST Arabidopsis thaliana protein match is: hydrolase (TAIR:AT5G38220.3); Has 2819 Blast hits to 2817 proteins in 490 species: Archae - 0; Bacteria - 727; Metazoa - 524; Fungi - 119; Plants - 148; Viruses - 6; Other Eukaryotes - 1295 (source: NCBI BLink).

Coordinates

chrA07:+:5061179..5061424

Molecular Weight (calculated)

8828.5 Da

IEP (calculated)

6.492

GRAVY (calculated)

-0.114

Length

81 amino acids

Sequence
(BLAST)

1: MGGVTSSIAA KFAFFPPTPP SYEVIADDNC GRRLYIPEIP RCDDVDILKL RTRCGNEIVA VYIKHSNANG TILYSHGNAA D

Best Arabidopsis Sequence Match ( AT1G66900.1 )
(BLAST)

001: MGGVTSSIAA KFAFFPPTPP SYEVIADDSC GGRLYIPEIP RRDDVDILKL RTRCGNEIVA VYVKHSKANG TLLYSHGNAA DLGQMFELFV ELSNRLRVNL
101: MGYDYSGYGQ STGQASECNT YADIEASYKC LKEKYGVKDD QLIVYGQSVG SGPTVDLASR TPNLRGVVLQ CPILSGMRVL YPVKCTYWFD IYKNIDKIGS
201: VTCPVLVIHG TADEVVDWSH GKRLWELSKE KYEPLWISGG GHCDLELYPD FIRHLKKFVV SLGNKQAEQA PT

Arabidopsis Description

Alpha/beta-Hydrolases superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q8VYT1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.