Factsheet for Bra008761.1-P

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum

Predictor Summary:

nucleus 2
mitochondrion 2
cytosol 1
extracellular 1
endoplasmic reticulum 2
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum
Any Predictor:	cytosol, mitochondrion, nucleus, secretory
BaCelLo:	nucleus
iPSORT:	mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
TargetP:	secretory
WoLF PSORT:	nucleus
YLoc:	endoplasmic reticulum

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX69584	Canola	endoplasmic reticulum	99.73	99.73
CDY09851	Canola	plastid	98.92	98.92
AT5G14390.1	Thale cress	cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole	91.35	91.6
Bra023463.1-P	Field mustard	cytosol	62.16	83.64
VIT_14s0219g00290.t01	Wine grape	cytosol, endoplasmic reticulum, nucleus	78.11	78.53
KRH07089	Soybean	cytosol	76.76	77.17
Solyc02g067920.2.1	Tomato	cytosol	76.49	76.49
KRH58237	Soybean	cytosol	75.14	75.75
KRG93968	Soybean	cytosol	74.86	75.48
PGSC0003DMT400017818	Potato	cytosol	75.68	75.47
Bra013831.1-P	Field mustard	cytosol	70.0	70.77
GSMUA_Achr9P02010_001	Banana	plastid	69.73	70.3
Bra037774.1-P	Field mustard	cytosol	50.27	68.38
Bra034043.1-P	Field mustard	cytosol	50.27	68.38
Bra030401.1-P	Field mustard	cytosol	50.27	68.38
GSMUA_Achr3P17130_001	Banana	plastid	67.57	68.12
GSMUA_Achr8P28640_001	Banana	plastid	67.03	67.57
GSMUA_Achr9P07620_001	Banana	plastid	65.14	65.49
OQU79022	Sorghum	cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole	64.32	64.85
Bra040701.1-P	Field mustard	plastid	55.68	63.38
Zm00001d030601_P001	Maize	plastid	62.16	62.67
Os12t0286600-01	Rice	cytosol, plastid	63.78	62.6
Bra011242.1-P	Field mustard	cytosol	49.73	62.59
Bra024028.1-P	Field mustard	cytosol	49.46	62.24
Bra010259.1-P	Field mustard	cytosol	49.46	62.24
Bra020738.1-P	Field mustard	cytosol, nucleus, plastid	58.65	61.3
Bra007861.1-P	Field mustard	cytosol	48.11	60.54
Bra032105.1-P	Field mustard	cytosol	48.11	60.54
Bra028401.1-P	Field mustard	plastid	56.22	60.47
Bra025415.1-P	Field mustard	cytosol, nucleus, plastid	60.0	58.27
Bra004197.1-P	Field mustard	cytosol	12.7	58.02
Bra014940.1-P	Field mustard	cytosol	12.7	58.02
Bra019712.1-P	Field mustard	cytosol	38.65	53.36
Bra040729.1-P	Field mustard	plastid	16.22	53.1
GSMUA_Achr9P22710_001	Banana	endoplasmic reticulum, golgi	45.95	51.99
Bra019211.1-P	Field mustard	nucleus	67.03	44.93
Bra023247.1-P	Field mustard	plastid	44.05	39.66
Bra033847.1-P	Field mustard	plastid	44.86	38.6

Protein Annotations

EnsemblPlants:Bra008761.1	EnsemblPlants:Bra008761.1-P	EnsemblPlantsGene:Bra008761	Gene3D:3.40.50.1820	InterPro:AB_hydrolase	InterPro:Hydrolase_4
InterPro:IPR029058	ncoils:Coil	PANTHER:PTHR12277	PANTHER:PTHR12277:SF118	PFAM:PF12146	SEG:seg
SUPFAM:SSF53474	UniParc:UPI00025451B6	UniProt:M4CX14	MapMan:35.2	:	:

Description

AT5G14390 (E=1e-182) | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Alpha/beta hydrolase fold-1 (InterPro:IPR000073); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G01690.1); Has 2904 Blast hits to 2898 proteins in 507 species: Archae - 0; Bacteria - 766; Metazoa - 578; Fungi - 129; Plants - 154; Viruses - 6; Other Eukaryotes - 1271 (source: NCBI BLink).

Coordinates

chrA10:+:13741697..13743770

Molecular Weight (calculated)

42362.4 Da

IEP (calculated)

8.802

GRAVY (calculated)

-0.666

Length

370 amino acids

Sequence
(BLAST)

001: MGGVTSSVAA KFAFFPPSPA SYRLITDEMT GLLVMNPFPH RENVEISKLP TRRGTEIVAM YVRHPMATST LLYSHGNAAD LGQMYELFIE LSIHLKVNLM
101: GYDYSGYGQS TGKPSEHNTY ADIEAAYKCL EETYGAKQED VILYGQSVGS GPTLDLAARL PQLRAVVLHS PILSGLRVMY PVKKTYWFDI YKNIDKIPLV
201: NCPVLVIHGT SDEVVDCSHG KQLWELSKEK YEPLWLEGGN HCDLEQYPEY IKHLKKFIAT VERSLSSRKS TCQSETQSSD VEMPRQSVDR REKPRQSVDR
301: RDKEKPPKSQ SKKSKLRITF EQHLDRSRRS VDLHEKARKS VDHYSHHHQN NHEIERGRKS VDRLDRVRSE

Best Arabidopsis Sequence Match ( AT5G14390.1 )
(BLAST)

001: MGGVTSSVAA KFAFFPPSPS SYKLVYDELT GLLLMNPFPH RENVEILKLP TRRGTEIVAM YVRHPMATST LLYSHGNAAD LGQMYELFIE LSIHLKVNLM
101: GYDYSGYGQS TGKPSEHHTY ADIEAAYKCL EETYGAKQED IILYGQSVGS GPTLDLAARL PQLRAAVLHS PILSGLRVMY PVKKTYWFDI FKNIDKIPLV
201: NCPVLVIHGT CDEVVDCSHG KQLWELSKEK YEPLWLEGGN HCDLEHYPEY IKHLKKFITT VERDLSSRAS TAQLEKQSSD LEMPRQSVDR REKPRQSVDK
301: REKEKPPKGP SKKSKLRITF EQHLDRTRRS VDFHEKARKS VDHHQHHQNH HQIERGRKSV DRLDRVRSE

Arabidopsis Description

Alpha/beta-Hydrolases superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9LY90]
SUBAcon: [extracellular,endoplasmic reticulum,vacuole,plastid,cytosol,plasma membrane,golgi,nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.