Factsheet for Bra040701.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 4
plastid 4
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY37504	Canola	cytosol	18.46	78.95
Bra023463.1-P	Field mustard	cytosol	53.85	63.64
Bra008761.1-P	Field mustard	endoplasmic reticulum	63.38	55.68
KRG94364	Soybean	cytosol	21.85	51.08
GSMUA_Achr3P17130_001	Banana	plastid	56.0	49.59
GSMUA_Achr9P02010_001	Banana	plastid	55.38	49.05
GSMUA_Achr8P28640_001	Banana	plastid	55.38	49.05
KRH57170	Soybean	plastid	55.38	48.52
KRH03885	Soybean	cytosol, plastid	54.77	47.98
Bra013831.1-P	Field mustard	cytosol	52.62	46.72
Os12t0286600-01	Rice	cytosol, plastid	54.15	46.68
Bra019712.1-P	Field mustard	cytosol	38.46	46.64
Bra020738.1-P	Field mustard	cytosol, nucleus, plastid	50.77	46.61
OQU79022	Sorghum	cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole	52.62	46.59
Bra034043.1-P	Field mustard	cytosol	38.77	46.32
Bra037774.1-P	Field mustard	cytosol	38.77	46.32
Bra030401.1-P	Field mustard	cytosol	38.77	46.32
Zm00001d030601_P001	Maize	plastid	52.31	46.32
GSMUA_Achr9P07620_001	Banana	plastid	52.31	46.2
GSMUA_Achr9P22710_001	Banana	endoplasmic reticulum, golgi	45.85	45.57
Bra011242.1-P	Field mustard	cytosol	40.62	44.9
Bra010259.1-P	Field mustard	cytosol	40.62	44.9
Bra024028.1-P	Field mustard	cytosol	40.31	44.56
Bra025415.1-P	Field mustard	cytosol, nucleus, plastid	51.08	43.57
Bra032105.1-P	Field mustard	cytosol	39.38	43.54
Bra007861.1-P	Field mustard	cytosol	39.08	43.2
Bra028401.1-P	Field mustard	plastid	42.77	40.41
Bra019211.1-P	Field mustard	nucleus	51.69	30.43
KRG99188	Soybean	extracellular	9.54	29.52
Bra023247.1-P	Field mustard	plastid	36.92	29.2
Bra033847.1-P	Field mustard	plastid	37.85	28.6
Bra014940.1-P	Field mustard	cytosol	5.85	23.46
Bra004197.1-P	Field mustard	cytosol	5.85	23.46
Bra040729.1-P	Field mustard	plastid	6.15	17.7

Protein Annotations

EnsemblPlants:Bra040701.1	EnsemblPlants:Bra040701.1-P	EnsemblPlantsGene:Bra040701	Gene3D:3.40.50.1820	InterPro:AB_hydrolase	InterPro:IPR029058
PANTHER:PTHR12277	PANTHER:PTHR12277:SF118	SEG:seg	SUPFAM:SSF53474	UniParc:UPI000253E7CE	UniProt:M4FHX2
MapMan:35.2	:	:	:	:	:

Description

AT3G01690 (E=1e-101) | EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Alpha/beta hydrolase fold-1 (InterPro:IPR000073); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G14390.1); Has 2954 Blast hits to 2948 proteins in 496 species: Archae - 2; Bacteria - 741; Metazoa - 618; Fungi - 134; Plants - 170; Viruses - 6; Other Eukaryotes - 1283 (source: NCBI BLink).

Coordinates

chrScaffold000237:+:18109..20047

Molecular Weight (calculated)

36746.4 Da

IEP (calculated)

9.761

GRAVY (calculated)

-0.819

Length

325 amino acids

Sequence
(BLAST)

001: MGGVTSSVAA KFAVLQGGHG RANGTVASRP IPTPRKRGNP QASDPKRHGD NGHVREAPDG HLDAALLAWK RHRSGTDPSE HNTYADIEAV YKCLEETYGS
101: KQEDVIFYGQ SVGSGPTLHL ASRFPLLRAV VLHSPILSGL RVMYAVKKTY WFDIYKNIDK IPYVDCPVLI IHGTSDEIVD CCHGKQLWEL CKDKYEPLWV
201: EGGNHCDLEQ YPEYMRHLKQ FITTVERLPS RSSSSSSGGV RDDGPTRRRS VDRREKPRQS TERKPLPPKS QWKKSSSKLR ISFDHHHLDR SRRSLDCHDK
301: TRKSIDHSHQ VERGRKSVDR VGSEL

Best Arabidopsis Sequence Match ( AT3G01690.1 )
(BLAST)

001: MGGVTSSVAA KFAFFPPSPP SYKVVTDELT GLLLLSPFPH RENVEIVKLR TRRGTEIVGM YVRHPMATST LLYSHGNAAD LGQMYELFIE LSIHLKVNLM
101: GYDYSGYGQS TGKPSEHNTY ADIEAVYKCL EETFGSKQEG VILYGQSVGS GPTLDLASRL PQLRAVVLHS PILSGLRVMY SVKKTYWFDI YKNIDKIPYV
201: DCPVLIIHGT SDEVVDCSHG KQLWELCKDK YEPLWVKGGN HCDLEHYPEY IRHLKKFIAT VERLPCPRMS SDQSERVRDA PPRRSMDRRV KPRQSTERRE
301: KEKPPKSQSK MSSSSSKLKI SFDQLDRSRR SVDCHEKTRK SVDQIERGRK SVDRLDRVRS E

Arabidopsis Description

Alpha/beta-Hydrolases superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9S7U7]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.