Factsheet for GSMUA_Achr9P02010_001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 1
mitochondrion 2
cytosol 2
plastid 4

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
GSMUA_Achr11P...
GSMUA_Achr11P...
GSMUA_Achr8P19010_001
GSMUA_AchrUn_...

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G01690.1	GSMUA_Achr11P...	AT4G39050.1	21798944
AT3G01690.1	GSMUA_Achr11P...	AT5G28900.1	21798944
AT3G01690.1	GSMUA_Achr8P19010_001	AT5G28900.1	21798944
AT3G01690.1	GSMUA_AchrUn_...	AT5G28900.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr3P17130_001	Banana	plastid	85.56	85.56
GSMUA_Achr8P28640_001	Banana	plastid	85.29	85.29
VIT_14s0219g00290.t01	Wine grape	cytosol, endoplasmic reticulum, nucleus	78.47	78.26
GSMUA_Achr9P07620_001	Banana	plastid	78.47	78.26
CDY31930	Canola	cytosol	13.62	78.12
CDY37505	Canola	cytosol, extracellular	14.17	77.61
KRH07089	Soybean	cytosol	77.38	77.17
Solyc02g067920.2.1	Tomato	cytosol	76.29	75.68
OQU79022	Sorghum	cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole	75.48	75.48
KRH58237	Soybean	cytosol	75.2	75.2
KRG93968	Soybean	cytosol	74.93	74.93
Os12t0286600-01	Rice	cytosol, plastid	76.84	74.8
PGSC0003DMT400017818	Potato	cytosol	75.48	74.66
PGSC0003DMT400039199	Potato	cytosol	75.48	74.66
Solyc03g111770.2.1	Tomato	cytosol	74.93	74.12
Zm00001d030601_P001	Maize	plastid	73.84	73.84
CDX91066	Canola	plastid	65.4	73.17
AT4G24760.1	Thale cress	cytosol, nucleus, plastid	72.21	72.6
AT3G01690.1	Thale cress	cytosol, plastid	70.84	72.02
CDY03421	Canola	cytosol	70.3	71.87
GSMUA_Achr9P22720_001	Banana	plastid	19.89	71.57
VIT_17s0000g09740.t01	Wine grape	cytosol, endoplasmic reticulum, nucleus	75.2	71.32
CDY34308	Canola	cytosol	71.12	71.31
Bra013831.1-P	Field mustard	cytosol	71.12	71.31
AT5G14390.1	Thale cress	cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole	70.3	69.92
Bra008761.1-P	Field mustard	endoplasmic reticulum	70.3	69.73
CDX69584	Canola	endoplasmic reticulum	70.3	69.73
CDY09851	Canola	plastid	70.3	69.73
KRH54278	Soybean	endoplasmic reticulum	72.21	69.55
KRH63667	Soybean	cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole	71.66	69.21
CDY32850	Canola	cytosol	64.85	69.19
KRH03885	Soybean	cytosol, plastid	69.48	68.73
CDY37504	Canola	cytosol	14.17	68.42
KRH57170	Soybean	plastid	68.94	68.19
CDY28862	Canola	cytosol, endoplasmic reticulum, nucleus, plastid	66.48	67.59
CDY28668	Canola	cytosol, endoplasmic reticulum, nucleus, plastid	66.48	67.59
GSMUA_Achr10P...	Banana	plastid	62.13	64.41
KRG94364	Soybean	cytosol	24.25	64.03
CDX85599	Canola	cytosol	45.23	63.6
GSMUA_Achr8P17940_001	Banana	plastid	59.4	63.56
CDX77081	Canola	plastid	36.51	63.51
CDY11031	Canola	cytosol, plastid	40.05	61.51
GSMUA_Achr3P28090_001	Banana	cytosol, nucleus, plastid	63.49	60.52
Bra023463.1-P	Field mustard	cytosol	45.23	60.36
CDX92650	Canola	cytosol	71.12	60.14
GSMUA_Achr11P...	Banana	cytosol	47.96	59.66
GSMUA_Achr5P04500_001	Banana	cytosol	47.14	58.64
GSMUA_Achr3P04580_001	Banana	cytosol	47.14	58.64
GSMUA_Achr9P13240_001	Banana	cytosol	46.05	57.29
Bra040701.1-P	Field mustard	plastid	49.05	55.38
GSMUA_Achr9P22710_001	Banana	endoplasmic reticulum, golgi	47.68	53.52
GSMUA_Achr1P06250_001	Banana	plastid	45.78	49.85
GSMUA_Achr7P17430_001	Banana	cytosol, plastid	45.23	48.68
Bra019211.1-P	Field mustard	nucleus	70.3	46.74
KRG99188	Soybean	extracellular	13.08	45.71
CDY53272	Canola	plastid	18.8	43.95
GSMUA_Achr1P06210_001	Banana	extracellular, plasma membrane	31.61	41.88
GSMUA_Achr1P06220_001	Banana	cytosol, endoplasmic reticulum, extracellular, mitochondrion, plastid	20.71	39.79

Protein Annotations

EnsemblPlants:GSMUA_Achr9P02010_001	EnsemblPlants:GSMUA_Achr9T02010_001	EnsemblPlantsGene:GSMUA_Achr9G02010_001	Gene3D:3.40.50.1820	InterPro:AB_hydrolase	InterPro:Hydrolase_4
InterPro:IPR029058	PANTHER:PTHR12277	PANTHER:PTHR12277:SF118	PFAM:PF12146	SUPFAM:SSF53474	UniParc:UPI0002963780
UniProt:M0TWQ8	MapMan:35.2	:	:	:	:

Description

Abhydrolase domain-containing protein FAM108C1 [Source:GMGC_GENE;Acc:GSMUA_Achr9G02010_001]

Coordinates

chr9:+:1531193..1536715

Molecular Weight (calculated)

41908.2 Da

IEP (calculated)

9.602

GRAVY (calculated)

-0.607

Length

367 amino acids

Sequence
(BLAST)

001: MGGVASSVAA KLAFFPPSPP SYEVVTDPGT GMARLSRFPH RENVEVLRLP TRRGTEIVAV YVRNPMASST LLYSHGNAAD LGQMYELFLE LSIHLRVNLL
101: GYDYSGYGQS TGKPSEQNTY ADIEAAYKCL IEQYGAKEEE IILYGQSVGS GPTVDLATRL PRLRAIVLHS PILSGLRVMY PVKRTYWFDI YKNIDKIPLV
201: KCPVLIIHGT SDEVVDCSHG KKLWELCKEK YEPLWLKGGK HCDLELFPEY IKHLKKFVST VEKSPSHRST WRISTERFEP PRKSSDCFEP SRKSIDHREK
301: HRPSSDKSRN KDQRRSNMEK LGKSKTSFDH LEKCRRSVDC LEKSRKNTDQ LDRGRKSVDR LDRIWAG

Best Arabidopsis Sequence Match ( AT3G01690.1 )
(BLAST)

001: MGGVTSSVAA KFAFFPPSPP SYKVVTDELT GLLLLSPFPH RENVEIVKLR TRRGTEIVGM YVRHPMATST LLYSHGNAAD LGQMYELFIE LSIHLKVNLM
101: GYDYSGYGQS TGKPSEHNTY ADIEAVYKCL EETFGSKQEG VILYGQSVGS GPTLDLASRL PQLRAVVLHS PILSGLRVMY SVKKTYWFDI YKNIDKIPYV
201: DCPVLIIHGT SDEVVDCSHG KQLWELCKDK YEPLWVKGGN HCDLEHYPEY IRHLKKFIAT VERLPCPRMS SDQSERVRDA PPRRSMDRRV KPRQSTERRE
301: KEKPPKSQSK MSSSSSKLKI SFDQLDRSRR SVDCHEKTRK SVDQIERGRK SVDRLDRVRS E

Arabidopsis Description

Alpha/beta-Hydrolases superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9S7U7]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.