CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum

Predictor Summary:

nucleus 3
mitochondrion 2
cytosol 1
extracellular 1
endoplasmic reticulum 2
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum
Any Predictor:	cytosol, mitochondrion, nucleus, secretory
BaCelLo:	nucleus
iPSORT:	mitochondrion
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
TargetP:	secretory
WoLF PSORT:	nucleus
YLoc:	endoplasmic reticulum

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH63667	Soybean	cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole	97.11	97.37
PGSC0003DMT400039199	Potato	cytosol	77.17	79.25
VIT_17s0000g09740.t01	Wine grape	cytosol, endoplasmic reticulum, nucleus	80.05	78.81
KRH58237	Soybean	cytosol	75.59	78.47
KRH07089	Soybean	cytosol	75.59	78.26
KRG93968	Soybean	cytosol	75.33	78.2
Solyc03g111770.2.1	Tomato	cytosol	76.12	78.17
KRH57170	Soybean	plastid	74.8	76.82
CDY03421	Canola	cytosol	71.92	76.32
KRH03885	Soybean	cytosol, plastid	74.02	76.01
AT4G24760.1	Thale cress	cytosol, nucleus, plastid	72.7	75.89
Bra013831.1-P	Field mustard	cytosol	71.92	74.86
CDY34308	Canola	cytosol	71.92	74.86
GSMUA_Achr3P17130_001	Banana	plastid	70.87	73.57
GSMUA_Achr9P02010_001	Banana	plastid	69.55	72.21
GSMUA_Achr8P28640_001	Banana	plastid	68.77	71.39
GSMUA_Achr9P07620_001	Banana	plastid	65.88	68.21
OQU79022	Sorghum	cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole	65.35	67.85
Zm00001d030601_P001	Maize	plastid	65.09	67.57
Os12t0286600-01	Rice	cytosol, plastid	66.14	66.84
KRG93729	Soybean	cytosol	62.2	62.7
KRH18325	Soybean	cytosol, nucleus, peroxisome	61.94	62.43
CDX92650	Canola	cytosol	70.6	61.98
KRH01428	Soybean	plastid	61.68	61.84
KRG94364	Soybean	cytosol	21.78	59.71
KRH45145	Soybean	plastid	59.84	59.69
KRH20089	Soybean	cytosol	44.88	58.36
KRH18213	Soybean	plastid	54.07	58.36
KRG93935	Soybean	plastid	53.54	57.63
KRH12940	Soybean	cytosol	44.88	57.58
GSMUA_Achr9P22710_001	Banana	endoplasmic reticulum, golgi	48.29	56.27
Bra019211.1-P	Field mustard	nucleus	70.08	48.37
KRG99188	Soybean	extracellular	12.6	45.71
KRH74343	Soybean	extracellular	46.72	43.73
KRH39591	Soybean	extracellular, mitochondrion, nucleus	46.46	43.38

Protein Annotations

EMBL:ACUP02003512	EnsemblPlants:KRH54278	EnsemblPlantsGene:GLYMA_06G174900	EntrezGene:100787620	Gene3D:3.40.50.1820	InterPro:AB_hydrolase
InterPro:Hydrolase_4	InterPro:IPR029058	PANTHER:PTHR12277	PANTHER:PTHR12277:SF118	PFAM:PF12146	ProteinID:KRH54278
ProteinID:KRH54278.1	SEG:seg	SUPFAM:SSF53474	UniParc:UPI000233AA52	UniProt:I1KC89	MapMan:35.2

Description

hypothetical protein

Coordinates

chr6:-:14791481..14794531

Molecular Weight (calculated)

44231.9 Da

IEP (calculated)

9.539

GRAVY (calculated)

-0.639

Length

381 amino acids

Sequence
(BLAST)

001: MGGVTSSMAA KLAFFPPSPA SYKVLKEEAT GLLLMEPFPH RENVEILRFP NRRGTEIVAM YVRHPMAKST LLYSHGNAAD IGQMYELFVE LSIHLRVNLM
101: GYDYSGYGQS SGKPSEHNTY ADIEAAYKYL EENYGVKQED IILYGQSVGS GPTLDLASRL PRLRAVVLHS PILSGLRVMY PVKRTYWFDI YKNIDKIPLV
201: KCPVLVIHGT ADEVVDCSHG KQLWELCQQK YEPLWLKGGN HCNLELYPEY LRHLRKFISS VEKPPSQRVS FRRSIDSRVE QSRGSTDCFE TPRKSTDQRD
301: KPRKSTDRTD KLKFHEFKFN NTEKLEKIRV QFDQMERSRR SVEYNDKSRS IEFQDKSRRS VDVQFERPRK SIDWLDRIRA S

Best Arabidopsis Sequence Match ( AT4G24760.1 )
(BLAST)

001: MGGVTSSMAA KLAFFPPNPP SYKLVRDETT ELFLMSPFPH RENVDILRLP TRRGTEIVAM YIRYPMAVTT LLYSHGNAAD IGQMYELFIE LSIHLRVNLM
101: GYDYSGYGQS SGKPTEQNTY ADIEAAYKCL EENYGAKQEN IILYGQSVGS GPTVDLAARL PRLRASILHS PILSGLRVMY PVKRTYWFDI YKNIDKITLV
201: RCPVLVIHGT ADDVVDFSHG KQLWELCQEK YEPLWLKGGN HCDLELFPEY IGHLKKFVSA VEKSASKRNS SFSRRSMEGC EQPPRHSVDA PRKSKDGREK
301: PRKSIDRLRF QGYKLSHIEK PEKLKVPFEE MERSRRSVDI YRDKSQPMER ARKSVDWLDR SRATE

Arabidopsis Description

Alpha/beta-Hydrolases superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9SB70]
SUBAcon: [plastid,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.