CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 1
mitochondrion 2
cytosol 1
plastid 4

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
KRH04275
KRH12155
KRH28216
KRH37161
KRH57556
KRH77271

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G38220.1	KRH12155	AT1G30860.1	21798944
AT5G38220.1	KRH37161	AT1G30860.1	21798944
AT5G38220.1	KRH04275	AT4G17680.1	21798944
AT5G38220.1	KRH28216	AT4G17680.1	21798944
AT5G38220.1	KRH57556	AT4G17680.1	21798944
AT5G38220.1	KRH77271	AT4G17680.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRG93935	Soybean	plastid	96.88	96.61
VIT_14s0006g02620.t01	Wine grape	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	82.15	84.8
PGSC0003DMT400067845	Potato	cytosol, plastid	77.62	80.83
Solyc02g086220.2.1	Tomato	cytosol, plastid	77.05	80.0
AT1G66900.1	Thale cress	cytosol	60.06	77.94
AT5G38220.1	Thale cress	cytosol	73.65	77.38
Bra037774.1-P	Field mustard	cytosol	59.49	77.21
Bra034043.1-P	Field mustard	cytosol	59.49	77.21
Bra030401.1-P	Field mustard	cytosol	59.49	77.21
CDY27016	Canola	plastid	74.5	76.9
PGSC0003DMT400006272	Potato	plastid	73.65	76.25
CDY51065	Canola	plastid	74.22	76.16
Bra028401.1-P	Field mustard	plastid	74.22	76.16
Solyc03g034270.2.1	Tomato	plastid	71.67	74.41
GSMUA_Achr8P17940_001	Banana	plastid	65.72	67.64
PGSC0003DMT400062645	Potato	mitochondrion	73.65	65.66
Os01t0689800-01	Rice	plastid	66.01	64.01
TraesCS3D01G262400.2	Wheat	plastid	64.59	63.33
TraesCS3B01G295700.1	Wheat	plastid	64.59	62.81
HORVU3Hr1G064120.3	Barley	plastid	64.31	62.71
EES01292	Sorghum	plastid	65.44	62.43
TraesCS3A01G262400.1	Wheat	plastid	64.31	62.36
Zm00001d011624_P001	Maize	plastid	65.16	62.16
Zm00001d043801_P002	Maize	plastid	63.74	60.81
KRH20089	Soybean	cytosol	49.58	59.73
KRH07089	Soybean	cytosol	59.77	57.34
KRH18325	Soybean	cytosol, nucleus, peroxisome	60.91	56.88
KRG93729	Soybean	cytosol	60.62	56.61
KRH12940	Soybean	cytosol	47.31	56.23
KRH58237	Soybean	cytosol	57.51	55.31
KRG93968	Soybean	cytosol	57.51	55.31
KRH01428	Soybean	plastid	59.49	55.26
KRH45145	Soybean	plastid	58.64	54.19
KRH57170	Soybean	plastid	56.94	54.18
KRH54278	Soybean	endoplasmic reticulum	58.36	54.07
KRH03885	Soybean	cytosol, plastid	56.66	53.91
KRH63667	Soybean	cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole	57.51	53.42
KRH74343	Soybean	extracellular	47.59	41.28
KRH39591	Soybean	extracellular, mitochondrion, nucleus	47.31	40.93
KRG94364	Soybean	cytosol	15.86	40.29
KRG99188	Soybean	extracellular	11.61	39.05
Zm00001d042401_P001	Maize	plastid	45.04	32.85

Protein Annotations

EMBL:ACUP02008046	EnsemblPlants:KRH18213	EnsemblPlantsGene:GLYMA_13G044600	EntrezGene:100790608	Gene3D:3.40.50.1820	InterPro:AB_hydrolase
InterPro:Hydrolase_4	InterPro:IPR029058	MEROPS:S09.A25	PANTHER:PTHR12277	PANTHER:PTHR12277:SF118	PFAM:PF12146
ProteinID:KRH18213	ProteinID:KRH18213.1	SEG:seg	SUPFAM:SSF53474	UniParc:UPI000233CBFF	UniProt:K7LXV6
MapMan:35.2	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr13:+:13814004..13836913

Molecular Weight (calculated)

39082.7 Da

IEP (calculated)

9.016

GRAVY (calculated)

-0.437

Length

353 amino acids

Sequence
(BLAST)

001: MGGVTSSIAA KFAFFPPHPP SYTVVAAEVG GVSDPPPAPP RLEIPEVPSK DNVDVLKLRT RRGNEIVAVY VKYHRPTCTM LYSHGNAADL GQMFELFVEL
101: SNRLRLNVMG YDYSGYGQST GKPTECNTYA DIDAAYKCLK EQYGVKDEQL ILYGQSVGSG PTLDLASRIP ELRGVVLHSP ILSGLRVLYP VKRTYWFDIY
201: KNIDKVGAVK CPVLVIHGTA DEVVDVSHGK QLWELCKVKY EPLWVSGGGH CNLELYPEFI KHLKKFVQTI GKSKATANGS KKDTVESENQ GKASKESESG
301: TSGTSELSTE IPEVSRNSLD SRLEKSKKPG KPEKSRMSTD HVDRFRRRKG LVW

Best Arabidopsis Sequence Match ( AT5G38220.1 )
(BLAST)

001: MGGVTSSIAA KFAFFPPSPP SYGFVSDVDR LYITEVPRRD DVDVLKLKTR RGNEIVAIYI KHPKANGTLL YSHGNAADLG QMFELFIELS NRLRLNLMGY
101: DYSGYGQSTG KASECNTYAD IDAAYTCLKE HYGVKDDQLI LYGQSVGSGP TIDLASRTPN LRGVVLHSPI LSGMRVLYPV KRTYWFDIYK NIDKIGAVTC
201: PVLVIHGTAD EVVDCSHGKQ LWELSKEKYE PLWVSGGGHC NLELYPEFIK HLKKYVISIS KGPRTGSNKT ATTDAAKKQS KPAENGRADT FQLGCCLPEV
301: SRNSVDSQLE KSKKTSKPEK SRMSIDRFRR KKGSVW

Arabidopsis Description

Alpha/beta-Hydrolases superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9FF34]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.