Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- nucleus 1
- mitochondrion 2
- cytosol 1
- plastid 3
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH18213 | Soybean | plastid | 96.61 | 96.88 |
| VIT_14s0006g02620.t01 | Wine grape | cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole | 81.36 | 84.21 |
| PGSC0003DMT400067845 | Potato | cytosol, plastid | 75.99 | 79.35 |
| Solyc02g086220.2.1 | Tomato | cytosol, plastid | 75.42 | 78.53 |
| AT5G38220.1 | Thale cress | cytosol | 72.6 | 76.49 |
| AT1G66900.1 | Thale cress | cytosol | 58.76 | 76.47 |
| CDY27016 | Canola | plastid | 73.45 | 76.02 |
| Bra030401.1-P | Field mustard | cytosol | 58.19 | 75.74 |
| Bra034043.1-P | Field mustard | cytosol | 58.19 | 75.74 |
| Bra037774.1-P | Field mustard | cytosol | 58.19 | 75.74 |
| PGSC0003DMT400006272 | Potato | plastid | 72.6 | 75.37 |
| CDY51065 | Canola | plastid | 73.16 | 75.29 |
| Bra028401.1-P | Field mustard | plastid | 73.16 | 75.29 |
| Solyc03g034270.2.1 | Tomato | plastid | 70.62 | 73.53 |
| GSMUA_Achr8P17940_001 | Banana | plastid | 65.82 | 67.93 |
| PGSC0003DMT400062645 | Potato | mitochondrion | 72.6 | 64.9 |
| Os01t0689800-01 | Rice | plastid | 65.54 | 63.74 |
| TraesCS3D01G262400.2 | Wheat | plastid | 63.84 | 62.78 |
| TraesCS3B01G295700.1 | Wheat | plastid | 63.84 | 62.26 |
| EES01292 | Sorghum | plastid | 64.97 | 62.16 |
| HORVU3Hr1G064120.3 | Barley | plastid | 63.56 | 62.15 |
| Zm00001d011624_P001 | Maize | plastid | 64.69 | 61.89 |
| TraesCS3A01G262400.1 | Wheat | plastid | 63.56 | 61.81 |
| Zm00001d043801_P002 | Maize | plastid | 63.28 | 60.54 |
| KRH20089 | Soybean | cytosol | 48.87 | 59.04 |
| KRH18325 | Soybean | cytosol, nucleus, peroxisome | 61.02 | 57.14 |
| KRH07089 | Soybean | cytosol | 59.32 | 57.07 |
| KRG93729 | Soybean | cytosol | 60.73 | 56.88 |
| KRH12940 | Soybean | cytosol | 46.33 | 55.22 |
| KRH01428 | Soybean | plastid | 59.04 | 55.0 |
| KRH58237 | Soybean | cytosol | 56.78 | 54.77 |
| KRG93968 | Soybean | cytosol | 56.5 | 54.5 |
| KRH45145 | Soybean | plastid | 58.19 | 53.93 |
| KRH57170 | Soybean | plastid | 56.21 | 53.64 |
| KRH54278 | Soybean | endoplasmic reticulum | 57.63 | 53.54 |
| KRH03885 | Soybean | cytosol, plastid | 55.93 | 53.37 |
| KRH63667 | Soybean | cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole | 56.78 | 52.89 |
| KRH74343 | Soybean | extracellular | 46.61 | 40.54 |
| KRH39591 | Soybean | extracellular, mitochondrion, nucleus | 46.33 | 40.2 |
| KRG94364 | Soybean | cytosol | 15.54 | 39.57 |
| KRG99188 | Soybean | extracellular | 11.58 | 39.05 |
| Zm00001d042401_P001 | Maize | plastid | 44.92 | 32.85 |
Protein Annotations
| EMBL:ACUP02011654 | EnsemblPlants:KRG93935 | EnsemblPlantsGene:GLYMA_19G050600 | EntrezGene:100793536 | Gene3D:3.40.50.1820 | InterPro:AB_hydrolase |
| InterPro:Hydrolase_4 | InterPro:IPR029058 | MEROPS:S09.A25 | PANTHER:PTHR12277 | PANTHER:PTHR12277:SF118 | PFAM:PF12146 |
| ProteinID:KRG93935 | ProteinID:KRG93935.1 | SEG:seg | SUPFAM:SSF53474 | UniParc:UPI000233E454 | UniProt:I1N6U0 |
| MapMan:35.2 | : | : | : | : | : |
Description
hypothetical protein
Coordinates
chr19:-:8156763..8166952
Molecular Weight (calculated)
39164.7 Da
IEP (calculated)
8.696
GRAVY (calculated)
-0.408
Length
354 amino acids
Sequence
(BLAST)
(BLAST)
001: MGGVTSSIAA KFAFFPPHPP SYTVVAAAEG GGFSDPAPAP PRLAIPEVPS KDNVDVLKLR TRRGNEIVAL YVKYHRPTCT MLYSHGNAAD LGQMFELFVE
101: LSNRLRLNVM GYDYSGYGQS TGKPTECNTY ADIDAAYKCL KEQYGVEDEQ LILYGQSVGS GPTLDLASRI AELRGVILHS PILSGLRVLY PVKRTYWFDI
201: YKNIDKVGAV KCPVLVIHGT ADEVVDVSHG KQLWELCKVK YEPLWVSGGG HCNLELYPEF IKHLKKFVQT IGKSKATANG SKKDTVESDN QGKASKESES
301: GTSVTSELST EIPEVSRNSL DSRLEKSKKP DKPEKSRMST DHVDRFRRRK GLVW
101: LSNRLRLNVM GYDYSGYGQS TGKPTECNTY ADIDAAYKCL KEQYGVEDEQ LILYGQSVGS GPTLDLASRI AELRGVILHS PILSGLRVLY PVKRTYWFDI
201: YKNIDKVGAV KCPVLVIHGT ADEVVDVSHG KQLWELCKVK YEPLWVSGGG HCNLELYPEF IKHLKKFVQT IGKSKATANG SKKDTVESDN QGKASKESES
301: GTSVTSELST EIPEVSRNSL DSRLEKSKKP DKPEKSRMST DHVDRFRRRK GLVW
001: MGGVTSSIAA KFAFFPPSPP SYGFVSDVDR LYITEVPRRD DVDVLKLKTR RGNEIVAIYI KHPKANGTLL YSHGNAADLG QMFELFIELS NRLRLNLMGY
101: DYSGYGQSTG KASECNTYAD IDAAYTCLKE HYGVKDDQLI LYGQSVGSGP TIDLASRTPN LRGVVLHSPI LSGMRVLYPV KRTYWFDIYK NIDKIGAVTC
201: PVLVIHGTAD EVVDCSHGKQ LWELSKEKYE PLWVSGGGHC NLELYPEFIK HLKKYVISIS KGPRTGSNKT ATTDAAKKQS KPAENGRADT FQLGCCLPEV
301: SRNSVDSQLE KSKKTSKPEK SRMSIDRFRR KKGSVW
101: DYSGYGQSTG KASECNTYAD IDAAYTCLKE HYGVKDDQLI LYGQSVGSGP TIDLASRTPN LRGVVLHSPI LSGMRVLYPV KRTYWFDIYK NIDKIGAVTC
201: PVLVIHGTAD EVVDCSHGKQ LWELSKEKYE PLWVSGGGHC NLELYPEFIK HLKKYVISIS KGPRTGSNKT ATTDAAKKQS KPAENGRADT FQLGCCLPEV
301: SRNSVDSQLE KSKKTSKPEK SRMSIDRFRR KKGSVW
Arabidopsis Description
Alpha/beta-Hydrolases superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9FF34]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.