Factsheet for Zm00001d042401_P001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 6
cytosol 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	cytosol
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plasma membrane
YLoc:	plastid

PPI

Inferred distinct locusB in Crop

locusB	locations
Zm00001d006417_P002
Zm00001d017649_P001
Zm00001d021532_P001
Zm00001d029988_P001
Zm00001d047069_P001
Zm00001d051484_P001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G38220.1	Zm00001d006417_P002	AT1G30860.1	21798944
AT5G38220.1	Zm00001d021532_P001	AT1G30860.1	21798944
AT5G38220.1	Zm00001d017649_P001	AT4G17680.1	21798944
AT5G38220.1	Zm00001d029988_P001	AT4G17680.1	21798944
AT5G38220.1	Zm00001d047069_P001	AT4G17680.1	21798944
AT5G38220.1	Zm00001d051484_P001	AT4G17680.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d011624_P001	Maize	plastid	41.32	54.05
Zm00001d043801_P002	Maize	plastid	39.26	51.35
AT5G38220.1	Thale cress	cytosol	33.88	48.81
AT1G66900.1	Thale cress	cytosol	27.07	48.16
PGSC0003DMT400067845	Potato	cytosol, plastid	33.47	47.79
VIT_14s0006g02620.t01	Wine grape	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	33.68	47.66
GSMUA_Achr8P17940_001	Banana	plastid	33.68	47.52
CDY51065	Canola	plastid	33.68	47.38
CDY27016	Canola	plastid	33.26	47.08
Solyc02g086220.2.1	Tomato	cytosol, plastid	32.64	46.47
PGSC0003DMT400006272	Potato	plastid	32.44	46.04
KRH18213	Soybean	plastid	32.85	45.04
KRG93935	Soybean	plastid	32.85	44.92
Solyc03g034270.2.1	Tomato	plastid	31.41	44.71
Zm00001d030601_P001	Maize	plastid	31.41	41.42
PGSC0003DMT400062645	Potato	mitochondrion	32.44	39.65
Zm00001d046660_P001	Maize	plastid	32.64	37.53
Zm00001d012172_P001	Maize	mitochondrion	17.98	37.18
Zm00001d015656_P001	Maize	plastid	32.64	36.57
Zm00001d053705_P001	Maize	cytosol	16.32	36.57
Zm00001d052810_P001	Maize	cytosol	29.13	33.73
Zm00001d024530_P001	Maize	cytosol	26.45	30.19
Bra004197.1-P	Field mustard	cytosol	4.75	28.4
Bra014940.1-P	Field mustard	cytosol	4.55	27.16

Protein Annotations

EnsemblPlants:Zm00001d042401_P001	EnsemblPlants:Zm00001d042401_T001	EnsemblPlantsGene:Zm00001d042401	Gene3D:3.40.50.1820	GO:GO:0003674	GO:GO:0003824
GO:GO:0016787	InterPro:AB_hydrolase	InterPro:IPR029058	PANTHER:PTHR12277	PANTHER:PTHR12277:SF124	ProteinID:ONM35267.1
SEG:seg	SUPFAM:SSF53474	UniParc:UPI000844CA34	UniProt:A0A1D6N3J9	MapMan:35.1	:

Description

alpha/beta-Hydrolases superfamily protein

Coordinates

chr3:+:164891628..164897555

Molecular Weight (calculated)

53051.7 Da

IEP (calculated)

6.752

GRAVY (calculated)

-0.229

Length

484 amino acids

Sequence
(BLAST)

001: MSELTPAPSS KPLRALCSAA VPAPLRGPLP LRHTRRIARS GPRKRGPLLP AAPSSPSPSS LPLHLTVPIP APWRSHPPPH SFLSLAAQAL VLAISLHPLP
101: TLAAFLASHR DELLRADITS LIKALELSGH WEWALALLRW AAKEGAADAS SAGGIGGSGN KQILDARHSE LFLEKAYWDE TLEYESLGEH FQDEEELPKR
201: LLLTYKPEES EDIPEPASVE EENAPVEEPV LVPPVTEVVS PPKTEVADIG ESLVAIEESN ALALAIVPTD IKPVAVTQVV VLVILYGQSV GSGPTIDLAS
301: RLPDLRAVVL HSPILSGLRV IYPVKRTFWF DIYKNIDKIG LVNCPVLPIP LGTSDDVVDC SHGKQLWEHC KVKYSPLWLS SGGHCNLELY PDYIKHLKKF
401: VSSVSKKASS KPDPKETTSK DDTTSKEIEE AYPEKPQEAK KCPQISRKSL DSRFGKSKTV DVPDKLRMSS DDIDKFRRSR CLVW

Best Arabidopsis Sequence Match ( AT3G30380.2 )
(BLAST)

001: MGAVTSSMAA KFAFFPPNPP SYGVEVVEGK LRLIGVENVK ENVEVLKLKT KRGNQVVAAY IKNPTASLTL LYSHGNAADL GQMFELFSEL SLHLRVNLIG
101: YDYSGYGRSS GKPSEQNTYS DIEAVYRCLE EKYGVKEQDV ILYGQSVGSG PTLELASRLP NLRAVVLHSA IASGLRVMYP VKRTYWFDIY KNVEKISFVK
201: CPVLVIHGTS DDVVNWSHGK QLFELCKEKY EPLWIKGGNH CDLELYPQYI KHLRKFVSAI EKSPILRNGP VPLTEKARSS TDIREPARPS TDQRDKSRTS
301: TDQREMPKLS TDIARASVDK RERTRRSVDG TEKPSNSAEQ QLVQPEKGRN SIDRFGEMIR SVGFCNIDCF KPTATAK

Arabidopsis Description

Alpha/beta-Hydrolases superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9LI62]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.