Factsheet for Zm00001d046660_P001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 5
mitochondrion 2
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
OQU76743	Sorghum	cytosol, mitochondrion	72.21	96.2
TraesCS7A01G391300.1	Wheat	plastid	81.47	89.56
TraesCS7B01G293000.1	Wheat	plastid	81.47	89.56
TraesCS7D01G386800.1	Wheat	plastid	81.0	89.03
HORVU7Hr1G092460.1	Barley	plastid	81.0	82.17
Zm00001d015656_P001	Maize	plastid	75.53	73.61
Zm00001d053705_P001	Maize	cytosol	35.63	69.44
Solyc02g065700.2.1	Tomato	cytosol	46.08	69.04
PGSC0003DMT400068320	Potato	cytosol	45.61	68.33
GSMUA_Achr10P...	Banana	plastid	57.24	68.08
KRG93729	Soybean	cytosol	60.09	66.93
KRH18325	Soybean	cytosol, nucleus, peroxisome	59.86	66.67
PGSC0003DMT400003495	Potato	plastid	58.67	65.52
Solyc02g089320.2.1	Tomato	plastid	55.82	65.46
KRH01428	Soybean	plastid	57.24	63.42
CDX85290	Canola	cytosol, nucleus, plastid	57.01	62.83
KRH45145	Soybean	plastid	57.01	62.83
Bra025415.1-P	Field mustard	cytosol, nucleus, plastid	56.29	62.2
VIT_01s0010g00670.t01	Wine grape	plastid	56.06	62.11
CDY35777	Canola	cytosol	55.58	62.07
CDX86348	Canola	cytosol, nucleus, plastid	56.29	62.04
Bra020738.1-P	Field mustard	cytosol, nucleus, plastid	52.02	61.86
AT3G30380.1	Thale cress	cytosol	57.01	60.15
Bra019712.1-P	Field mustard	cytosol	38.24	60.07
PGSC0003DMT400068318	Potato	plastid	15.91	59.29
Zm00001d030601_P001	Maize	plastid	51.54	59.13
AT1G13610.1	Thale cress	plastid	49.41	58.1
CDX98113	Canola	plastid	50.12	57.97
CDY56180	Canola	plastid	49.41	57.3
Zm00001d011624_P001	Maize	plastid	49.17	55.95
Zm00001d043801_P002	Maize	plastid	48.93	55.68
Solyc05g010680.1.1	Tomato	cytosol	49.88	54.83
VIT_14s0083g00800.t01	Wine grape	plastid	57.01	54.55
PGSC0003DMT400050553	Potato	cytosol	47.74	54.18
Zm00001d052810_P001	Maize	cytosol	52.97	53.35
CDY45906	Canola	cytosol	27.08	51.12
Bra040729.1-P	Field mustard	plastid	12.83	47.79
Zm00001d012172_P001	Maize	mitochondrion	26.13	47.01
Zm00001d024530_P001	Maize	cytosol	41.09	40.8
Zm00001d042401_P001	Maize	plastid	37.53	32.64

Protein Annotations

EnsemblPlants:Zm00001d046660_P001	EnsemblPlants:Zm00001d046660_T001	EnsemblPlantsGene:Zm00001d046660	Gene3D:3.40.50.1820	GO:GO:0003674	GO:GO:0003824
GO:GO:0005575	GO:GO:0016020	GO:GO:0016021	GO:GO:0016787	InterPro:AB_hydrolase	InterPro:Hydrolase_4
InterPro:IPR029058	PANTHER:PTHR12277	PANTHER:PTHR12277:SF70	PFAM:PF12146	ProteinID:AQL04809.1	SEG:seg
SUPFAM:SSF53474	TMHMM:TMhelix	UniParc:UPI000843D3F5	UniProt:A0A1D6P4C5	MapMan:35.2	:

Description

alpha/beta-Hydrolases superfamily protein

Coordinates

chr9:-:100852624..100856957

Molecular Weight (calculated)

46858.0 Da

IEP (calculated)

8.514

GRAVY (calculated)

-0.312

Length

421 amino acids

Sequence
(BLAST)

001: MGAVASTVAA RFAFFPPTPP SYGVEPPPSP AAAAADTEVV ELSGVPVSRG RGVEARRLPT KRGTEVVSMY VRQPGARLTL LYSHGNAADL GQMYELFVEL
101: SAHLNVNLMG YDYSGYGQSS GKPSEQNTYA DIEAVYRCLL ETYGASEENI ILYGQSVGSG PTLDLASRLP HLRAVVLHSP ISSGLRVMYP VKHTYWFDIY
201: KNIDKIPLVR CPVLVIHGTA DEVVDCSHGR ALWELSKVKY EPLWIKGGNH CNLELYPEYI KHLKKFVTAI EKSQPVKDES PESSGPSDPS EIGSESAENS
301: RRSTDIRDKP RSSIDHRPSI DRREKPRGSI DRRDKNRKSI DQLDKPRASV DQPDRARKSI DRSVYTFLCF LHYIFVWNFV IKRILFLALL TLVIPRCDSF
401: GGMMRSVKLC NIDCFTAASG S

Best Arabidopsis Sequence Match ( AT3G30380.1 )
(BLAST)

001: MGAVTSSMAA KFAFFPPNPP SYGVEVVEGK LRLIGVENVK ENVEVLKLKT KRGNQVVAAY IKNPTASLTL LYSHGNAADL GQMFELFSEL SLHLRVNLIG
101: YDYSGYGRSS GKPSEQNTYS DIEAVYRCLE EKYGVKEQDV ILYGQSVGSG PTLELASRLP NLRAVVLHSA IASGLRVMYP VKRTYWFDIY KNVEKISFVK
201: CPVLVIHGTS DDVVNWSHGK QLFELCKEKY EPLWIKGGNH CDLELYPQYI KHLRKFVSAI EKSPILRNGP VPLTEKARSS TDIREPARPS TDQRDKSRTS
301: TDQREMPKLS TDIARASVDK RERTRRSVDG TEKPSNSAEQ QLVQPEKGRN SIDRYISQSF YDVLMIMLLM IMYDNRFGEM IRSVGFCNID CFKPTATAK

Arabidopsis Description

Alpha/beta-Hydrolases superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9LI62]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.