Factsheet for PGSC0003DMT400050553

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc05g010680.1.1	Tomato	cytosol	92.45	89.56
PGSC0003DMT400068320	Potato	cytosol	43.4	57.3
OQU76743	Sorghum	cytosol, mitochondrion	48.25	56.65
GSMUA_Achr10P...	Banana	plastid	52.29	54.8
VIT_01s0010g00670.t01	Wine grape	plastid	55.26	53.95
PGSC0003DMT400017818	Potato	cytosol	53.91	53.91
PGSC0003DMT400003495	Potato	plastid	54.72	53.85
PGSC0003DMT400039199	Potato	cytosol	52.83	52.83
TraesCS7D01G386800.1	Wheat	plastid	53.64	51.96
TraesCS7B01G293000.1	Wheat	plastid	53.64	51.96
TraesCS7A01G391300.1	Wheat	plastid	53.64	51.96
PGSC0003DMT400067845	Potato	cytosol, plastid	47.17	51.62
PGSC0003DMT400008297	Potato	cytosol	40.97	51.53
GSMUA_Achr9P22720_001	Banana	plastid	14.02	50.98
Os02t0190800-01	Rice	plasma membrane	53.1	50.64
GSMUA_Achr3P28090_001	Banana	cytosol, nucleus, plastid	52.29	50.39
TraesCS6B01G199000.1	Wheat	plastid	53.1	50.0
PGSC0003DMT400006272	Potato	plastid	45.82	49.85
TraesCS6A01G170900.1	Wheat	plastid	53.1	49.75
TraesCS6D01G160600.1	Wheat	plastid	52.83	49.75
HORVU6Hr1G034870.2	Barley	plastid	52.83	49.12
CDX98113	Canola	plastid	47.98	48.9
Bra019712.1-P	Field mustard	cytosol	35.31	48.88
PGSC0003DMT400068318	Potato	plastid	14.82	48.67
EES06425	Sorghum	plastid	53.64	48.66
CDY56180	Canola	plastid	47.17	48.21
HORVU7Hr1G092460.1	Barley	plastid	53.64	47.95
Zm00001d046660_P001	Maize	plastid	54.18	47.74
AT1G13610.1	Thale cress	plastid	45.82	47.49
Bra040729.1-P	Field mustard	plastid	14.02	46.02
Zm00001d052810_P001	Maize	cytosol	50.4	44.74
Zm00001d015656_P001	Maize	plastid	52.02	44.68
TraesCS7B01G196600.1	Wheat	cytosol	49.06	44.39
TraesCS7D01G284300.3	Wheat	cytosol	48.79	44.15
KXG25721	Sorghum	cytosol	48.79	43.93
PGSC0003DMT400062645	Potato	mitochondrion	45.82	42.93
Zm00001d012172_P001	Maize	mitochondrion	26.68	42.31
HORVU7Hr1G061990.5	Barley	cytosol, nucleus, plastid	49.33	40.94
Zm00001d053705_P001	Maize	cytosol	22.91	39.35
PGSC0003DMT400006166	Potato	plasma membrane, plastid	38.54	36.67

Protein Annotations

EnsemblPlants:PGSC0003DMT400050553	EnsemblPlantsGene:PGSC0003DMG400019646	Gene3D:3.40.50.1820	InterPro:AB_hydrolase	InterPro:Hydrolase_4	InterPro:IPR029058
PANTHER:PTHR12277	PANTHER:PTHR12277:SF88	PFAM:PF12146	PGSC:PGSC0003DMG400019646	SEG:seg	SUPFAM:SSF53474
UniParc:UPI0002955874	UniProt:M1BQI1	MapMan:35.2	:	:	:

Description

Protein bem46 [Source:PGSC_GENE;Acc:PGSC0003DMG400019646]

Coordinates

chr5:+:1085106..1087833

Molecular Weight (calculated)

42455.8 Da

IEP (calculated)

6.528

GRAVY (calculated)

-0.441

Length

371 amino acids

Sequence
(BLAST)

001: MGGVSSTIAS KLAFFPPEPS YQVDLDEQTQ KLKLLGVSQS EKGEVSILQT KRGHYIFSVF VRNKGATMTL LYSHGNAADI GQMFQFFIEL SDRLRVNVMG
101: YDYAGYGRSN GEPSEQNTYA DIEAVYKCLK EIYEVKEEDI ILYGQSIGSG PTLELATKLP QIRGVILQSA ILSGLRVMYR IKYSLWLDIY KNIDKIPYVS
201: CPVLVIHIYD SCDGVDLQGT EDDIVDISHG KKLWELSKMK YEPLWVKGGN HCDLQVFPQF FTHLKKFIIS VERQSDYSKN VELEESIIDL DYTLDITNEI
301: KCRPSIEEIE KSSRISTEQK EIIPIRPSTD RKLKPRISFD KREKPRKSMD YFGKSRSSTD QSERGRNSID R

Best Arabidopsis Sequence Match ( AT3G01690.1 )
(BLAST)

001: MGGVTSSVAA KFAFFPPSPP SYKVVTDELT GLLLLSPFPH RENVEIVKLR TRRGTEIVGM YVRHPMATST LLYSHGNAAD LGQMYELFIE LSIHLKVNLM
101: GYDYSGYGQS TGKPSEHNTY ADIEAVYKCL EETFGSKQEG VILYGQSVGS GPTLDLASRL PQLRAVVLHS PILSGLRVMY SVKKTYWFDI YKNIDKIPYV
201: DCPVLIIHGT SDEVVDCSHG KQLWELCKDK YEPLWVKGGN HCDLEHYPEY IRHLKKFIAT VERLPCPRMS SDQSERVRDA PPRRSMDRRV KPRQSTERRE
301: KEKPPKSQSK MSSSSSKLKI SFDQLDRSRR SVDCHEKTRK SVDQIERGRK SVDRLDRVRS E

Arabidopsis Description

Alpha/beta-Hydrolases superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9S7U7]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.