Factsheet for PGSC0003DMT400006166

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, plastid

Predictor Summary:

nucleus 2
plastid 2
mitochondrion 2
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 2
golgi 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane, plastid
Any Predictor:	cytosol, mitochondrion, nucleus, plastid, secretory
BaCelLo:	nucleus
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	nucleus
Predotar:	plastid
PProwler:	mitochondrion
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc08g076350.2.1	Tomato	plastid	98.46	98.46
VIT_02s0012g02180.t01	Wine grape	mitochondrion, vacuole	44.87	84.95
GSMUA_Achr1P06250_001	Banana	plastid	63.08	73.0
GSMUA_Achr7P17430_001	Banana	cytosol, plastid	61.28	70.09
TraesCS7B01G188600.1	Wheat	plastid	61.28	68.88
TraesCS7A01G298400.1	Wheat	plastid	61.03	68.79
TraesCS7D01G294200.1	Wheat	plastid	60.51	68.21
CDY35552	Canola	plastid	60.77	67.91
KRH39591	Soybean	extracellular, mitochondrion, nucleus	70.26	67.16
KRH74343	Soybean	extracellular	70.0	67.08
EES14598	Sorghum	plastid	62.31	66.39
Os08t0161500-01	Rice	plasma membrane	63.33	63.5
CDY22593	Canola	plastid	65.13	61.8
Bra023247.1-P	Field mustard	plastid	64.62	61.31
CDY12257	Canola	plastid	64.62	61.31
GSMUA_Achr1P06220_001	Banana	cytosol, endoplasmic reticulum, extracellular, mitochondrion, plastid	30.0	61.26
GSMUA_Achr1P06210_001	Banana	extracellular, plasma membrane	42.82	60.29
AT1G32190.1	Thale cress	plastid	64.87	59.95
Bra033847.1-P	Field mustard	plastid	64.62	58.6
CDY43012	Canola	plastid	63.85	57.77
PGSC0003DMT400008297	Potato	cytosol	43.08	56.95
PGSC0003DMT400068320	Potato	cytosol	39.23	54.45
Zm00001d024530_P001	Maize	cytosol	58.72	54.01
PGSC0003DMT400068318	Potato	plastid	15.13	52.21
HORVU7Hr1G070080.3	Barley	plastid	43.85	49.0
PGSC0003DMT400067845	Potato	cytosol, plastid	41.54	47.79
PGSC0003DMT400006272	Potato	plastid	41.03	46.92
PGSC0003DMT400003495	Potato	plastid	43.33	44.83
PGSC0003DMT400039199	Potato	cytosol	41.28	43.4
PGSC0003DMT400017818	Potato	cytosol	41.28	43.4
PGSC0003DMT400062645	Potato	mitochondrion	41.03	40.4
PGSC0003DMT400050553	Potato	cytosol	36.67	38.54

Protein Annotations

EnsemblPlants:PGSC0003DMT400006166	EnsemblPlantsGene:PGSC0003DMG402002397	EntrezGene:102588263	Gene3D:3.40.50.1820	InterPro:AB_hydrolase	InterPro:Hydrolase_4
InterPro:IPR029058	MEROPS:S09.A30	PANTHER:PTHR12277	PANTHER:PTHR12277:SF45	PFAM:PF12146	PGSC:PGSC0003DMG402002397
RefSeq:XP_006352914.1	SEG:seg	SUPFAM:SSF53474	UniParc:UPI0002951517	UniProt:M0ZQX9	MapMan:35.2

Description

Protein bem46 [Source:PGSC_GENE;Acc:PGSC0003DMG402002397]

Coordinates

chr8:-:48914121..48922986

Molecular Weight (calculated)

43459.1 Da

IEP (calculated)

8.375

GRAVY (calculated)

-0.050

Length

390 amino acids

Sequence
(BLAST)

001: MGCCISQLAA KFAFFPPSPA TYQVKKKDDG RLVAVSTTSS MPISGAADDL SLDVLLVDTK RGNKIVAFYL KNPYAKLTVL YSHGNAADLG QLYDLFVQLK
101: ANLRVNLMGY DYSGYGASTG KPSEFDTYAD IEAVYDCLQT EYGISQEDLI LYGQSVGSGP TLHLAAKLPR LRGVVLHSGI LSGLRVLCHA NFTFCFDIYK
201: NLNKIQKVKS PVLVIHGTED DVVNWLHGNG LWKMSRDPYE PLWIKGGGHC NLELYPDYIR HLCRFIQEME CMTTEIRLKK IKQTLRLPKR SDTTISTNCC
301: CQVKCRLPNC LNCSKVSCTK CCYWPKFPKW KPKCLVCWKP SCLGCSCTLP KCSCACPECS CACPKCSFTC PKCSCTCPKC CCWSVKCSCW

Best Arabidopsis Sequence Match ( AT1G32190.1 )
(BLAST)

001: MGCMFSHLAA KFAFFPPSPP TYHLTKTPDG KLSAVSSASS SSSTFPSAGD PSLDVKVVKT RRGNKVTAFY LRNPNARLTL LYSHGNAADL GQLFDLFVQL
101: KVNLRVNLMG YDYSGYGAST GKPSEYDTYA DIEAAYECLQ TDYGVGQEDL ILYGQSVGSG PTLHLASKLP RLRGVVLHSG ILSGLRVLCH VKFKFCCDIY
201: SNVNKIKKVK CPVLVIHGTE DDVVNWLHGN RLWKMAKEPY EPLWIKGGGH CNLEIYPDYI RHLYRFIQDM ENTTTKSRLK TIWQEIRRRD ESTGCCCSGL
301: CRPSCSCPKP RCPKPSCSCG CGCGDCGCFK CSCPTLKGCF SCCKKPSCVS SCCCPTFKCS SCFGKPKCPK CSCWKCLKCP DTECCRSSCC CSGCFSWLCC
401: CGGGRRKEGE RRGSTTLEKS EG

Arabidopsis Description

Alpha/beta-Hydrolases superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9FVR4]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.