Factsheet for GSMUA_Achr1P06220_001

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, endoplasmic reticulum, mitochondrion, plastid, cytosol

Predictor Summary:

nucleus 2
cytosol 2
plastid 2
endoplasmic reticulum 1
mitochondrion 2
extracellular 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr1P06210_001	Banana	extracellular, plasma membrane	90.05	62.09
GSMUA_Achr1P06250_001	Banana	plastid	92.15	52.23
GSMUA_Achr7P17430_001	Banana	cytosol, plastid	79.06	44.28
TraesCS7D01G294200.1	Wheat	plastid	69.63	38.44
TraesCS7B01G188600.1	Wheat	plastid	69.63	38.33
TraesCS7A01G298400.1	Wheat	plastid	69.11	38.15
EES14598	Sorghum	plastid	70.68	36.89
HORVU7Hr1G070080.3	Barley	plastid	63.35	34.67
Os08t0161500-01	Rice	plasma membrane	69.63	34.19
CDY35552	Canola	plastid	56.02	30.66
PGSC0003DMT400006166	Potato	plasma membrane, plastid	61.26	30.0
Solyc08g076350.2.1	Tomato	plastid	60.73	29.74
Zm00001d024530_P001	Maize	cytosol	65.97	29.72
KRH74343	Soybean	extracellular	61.78	28.99
KRH39591	Soybean	extracellular, mitochondrion, nucleus	60.73	28.43
GSMUA_Achr5P04500_001	Banana	cytosol	42.41	27.46
GSMUA_Achr9P13240_001	Banana	cytosol	41.36	26.78
Bra023247.1-P	Field mustard	plastid	57.59	26.76
CDY12257	Canola	plastid	57.59	26.76
CDY22593	Canola	plastid	57.59	26.76
GSMUA_Achr3P04580_001	Banana	cytosol	40.84	26.44
Bra033847.1-P	Field mustard	plastid	58.64	26.05
CDY43012	Canola	plastid	58.64	25.99
AT1G32190.1	Thale cress	plastid	57.07	25.83
GSMUA_Achr11P...	Banana	cytosol	39.27	25.42
GSMUA_Achr9P22710_001	Banana	endoplasmic reticulum, golgi	41.88	24.46
GSMUA_Achr10P...	Banana	plastid	44.5	24.01
GSMUA_Achr3P17130_001	Banana	plastid	40.31	20.98
GSMUA_Achr9P02010_001	Banana	plastid	39.79	20.71
GSMUA_Achr3P28090_001	Banana	cytosol, nucleus, plastid	40.84	20.26
GSMUA_Achr8P17940_001	Banana	plastid	35.6	19.83
GSMUA_Achr8P28640_001	Banana	plastid	36.65	19.07
GSMUA_Achr9P07620_001	Banana	plastid	36.65	19.02
VIT_02s0012g02180.t01	Wine grape	mitochondrion, vacuole	17.8	16.5
GSMUA_Achr9P22720_001	Banana	plastid	1.57	2.94

Protein Annotations

EnsemblPlants:GSMUA_Achr1P06220_001	EnsemblPlants:GSMUA_Achr1T06220_001	EnsemblPlantsGene:GSMUA_Achr1G06220_001	Gene3D:3.40.50.1820	InterPro:AB_hydrolase	InterPro:IPR029058
PANTHER:PTHR12277	PANTHER:PTHR12277:SF45	SEG:seg	SUPFAM:SSF53474	UniParc:UPI0002959407	UniProt:M0RXI0
MapMan:35.2	:	:	:	:	:

Description

abhydrolase domain-containing protein FAM108C1, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr1G06220_001]

Coordinates

chr1:-:5009580..5012016

Molecular Weight (calculated)

21900.1 Da

IEP (calculated)

8.977

GRAVY (calculated)

-0.040

Length

191 amino acids

Sequence
(BLAST)

001: MANLSLAVPH CVWQLPRLRG IVLHSAILSG LRVVCHVKFS FCFVIYKNID KMKKVKCPVF VIHGTEDDVV NWLHGHGLWK LAEEPYDPLW IKGGGHCNLE
101: LYPDYIRHLC KFIREMENLT TATRLKKIRQ TLKLPAKAAA TTSTTTFTTN CCCQIRCRKP DCWSCPRRGC LMVRCSKGSA YLCNWCCGDW H

Best Arabidopsis Sequence Match ( AT1G32190.1 )
(BLAST)

001: MGCMFSHLAA KFAFFPPSPP TYHLTKTPDG KLSAVSSASS SSSTFPSAGD PSLDVKVVKT RRGNKVTAFY LRNPNARLTL LYSHGNAADL GQLFDLFVQL
101: KVNLRVNLMG YDYSGYGAST GKPSEYDTYA DIEAAYECLQ TDYGVGQEDL ILYGQSVGSG PTLHLASKLP RLRGVVLHSG ILSGLRVLCH VKFKFCCDIY
201: SNVNKIKKVK CPVLVIHGTE DDVVNWLHGN RLWKMAKEPY EPLWIKGGGH CNLEIYPDYI RHLYRFIQDM ENTTTKSRLK TIWQEIRRRD ESTGCCCSGL
301: CRPSCSCPKP RCPKPSCSCG CGCGDCGCFK CSCPTLKGCF SCCKKPSCVS SCCCPTFKCS SCFGKPKCPK CSCWKCLKCP DTECCRSSCC CSGCFSWLCC
401: CGGGRRKEGE RRGSTTLEKS EG

Arabidopsis Description

Alpha/beta-Hydrolases superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9FVR4]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.