CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 2
plastid 5
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY12257	Canola	plastid	98.05	98.05
CDY35552	Canola	plastid	78.59	92.55
AT1G32190.1	Thale cress	plastid	90.27	87.91
CDY43012	Canola	plastid	90.27	86.08
VIT_02s0012g02180.t01	Wine grape	mitochondrion, vacuole	39.42	78.64
GSMUA_Achr1P06250_001	Banana	plastid	56.2	68.55
TraesCS7D01G294200.1	Wheat	plastid	56.45	67.05
TraesCS7A01G298400.1	Wheat	plastid	56.45	67.05
GSMUA_Achr7P17430_001	Banana	cytosol, plastid	55.47	66.86
TraesCS7B01G188600.1	Wheat	plastid	56.45	66.86
PGSC0003DMT400006166	Potato	plasma membrane, plastid	61.8	65.13
KRH74343	Soybean	extracellular	64.48	65.11
Solyc08g076350.2.1	Tomato	plastid	61.56	64.87
KRH39591	Soybean	extracellular, mitochondrion, nucleus	63.99	64.46
EES14598	Sorghum	plastid	56.93	63.93
Os08t0161500-01	Rice	plasma membrane	58.15	61.44
CDY20302	Canola	cytosol	38.93	60.61
CDY34778	Canola	cytosol	42.34	59.18
CDY55247	Canola	cytosol	42.09	58.84
GSMUA_Achr1P06210_001	Banana	extracellular, plasma membrane	39.42	58.48
CDY37505	Canola	cytosol, extracellular	9.49	58.21
CDX68717	Canola	cytosol	41.36	57.82
CDY31930	Canola	cytosol	9.0	57.81
GSMUA_Achr1P06220_001	Banana	cytosol, endoplasmic reticulum, extracellular, mitochondrion, plastid	26.76	57.59
CDY20301	Canola	cytosol	41.12	57.29
CDY28238	Canola	cytosol	40.88	57.14
CDY13406	Canola	cytosol	40.63	56.8
CDX72285	Canola	cytosol	40.39	56.46
CDY51485	Canola	cytosol	40.39	56.46
CDY23273	Canola	cytosol	39.9	55.78
CDY46139	Canola	cytosol	33.58	54.76
Zm00001d024530_P001	Maize	cytosol	54.99	53.3
HORVU7Hr1G070080.3	Barley	plastid	41.61	49.0
CDY27016	Canola	plastid	40.63	48.83
CDY51065	Canola	plastid	40.15	47.97
CDX91066	Canola	plastid	37.96	47.56
CDX77081	Canola	plastid	23.84	46.45
CDY32850	Canola	cytosol	38.44	45.93
CDY37504	Canola	cytosol	8.27	44.74
CDY35777	Canola	cytosol	40.88	44.56
CDX85290	Canola	cytosol, nucleus, plastid	41.36	44.5
CDY28862	Canola	cytosol, endoplasmic reticulum, nucleus, plastid	38.93	44.32
CDY28668	Canola	cytosol, endoplasmic reticulum, nucleus, plastid	38.93	44.32
CDX86348	Canola	cytosol, nucleus, plastid	40.88	43.98
CDY09851	Canola	plastid	39.42	43.78
CDX69584	Canola	endoplasmic reticulum	39.42	43.78
CDY03421	Canola	cytosol	38.2	43.73
CDY34308	Canola	cytosol	38.2	42.9
CDX98113	Canola	plastid	37.71	42.58
CDY56180	Canola	plastid	37.23	42.15
CDX85599	Canola	cytosol	24.33	38.31
CDX92650	Canola	cytosol	38.93	36.87
CDY53272	Canola	plastid	13.14	34.39
CDY11031	Canola	cytosol, plastid	17.27	29.71
CDY45906	Canola	cytosol	14.11	26.01

Protein Annotations

EnsemblPlants:CDY22593	EnsemblPlantsGene:GSBRNA2T00019245001	Gene3D:3.40.50.1820	GO:GO:0003674	GO:GO:0003824	GO:GO:0016787
InterPro:4Fe4S_Fe_S_CS	InterPro:AB_hydrolase	InterPro:IPR029058	InterPro:PLipase/COase/thioEstase	PANTHER:PTHR12277	PANTHER:PTHR12277:SF45
PFAM:PF02230	ProteinID:CDY22593	ProteinID:CDY22593.1	ScanProsite:PS00198	SEG:seg	SUPFAM:SSF53474
UniParc:UPI0004EE1A85	UniProt:A0A078GD94	MapMan:35.2	:	:	:

Description

BnaC05g24310DBnaC05g24310D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GD94]

Coordinates

chrLK032133:-:503916..506652

Molecular Weight (calculated)

45546.4 Da

IEP (calculated)

8.558

GRAVY (calculated)

-0.244

Length

411 amino acids

Sequence
(BLAST)

001: MGCMFSHLAA KFAFFPPSPP TYHLTKNPDG KLSAVSASSS STFPAAGDSS IDVRVVKTRR GNKVAAFYLR NPNARLTLLY SHGNAADLGQ LVDLFVQLKV
101: NLRVNLMGYD YSGYGASTGK PSEYDTYADI EAVYECLQTE YGVGQEDLIL YGQSVGSGPT LHLASKLPRL RGVVLHSGIL SGLRVLCHVK FKFCCDIYSN
201: VNKIKKVKCP VLVIHGTEDD VVNWLHGNRL WKMAKEPYEP LWIKGGGHCN LEIYPDYIRH LYRFMQDMEN TTTKSRLKKI WQEIRRRDES KGCCSFKLCR
301: PKCPSCPKPS CDCGECGCCK CECPSLKGCF SCCKKPSCVG CCCPKFKCCN CFGKPTCPKC SCWKCLKCSE SECCRSCCCA GCFSWLCCCG GRKRKELKTR
401: GGDTTVAKSE G

Best Arabidopsis Sequence Match ( AT1G32190.1 )
(BLAST)

001: MGCMFSHLAA KFAFFPPSPP TYHLTKTPDG KLSAVSSASS SSSTFPSAGD PSLDVKVVKT RRGNKVTAFY LRNPNARLTL LYSHGNAADL GQLFDLFVQL
101: KVNLRVNLMG YDYSGYGAST GKPSEYDTYA DIEAAYECLQ TDYGVGQEDL ILYGQSVGSG PTLHLASKLP RLRGVVLHSG ILSGLRVLCH VKFKFCCDIY
201: SNVNKIKKVK CPVLVIHGTE DDVVNWLHGN RLWKMAKEPY EPLWIKGGGH CNLEIYPDYI RHLYRFIQDM ENTTTKSRLK TIWQEIRRRD ESTGCCCSGL
301: CRPSCSCPKP RCPKPSCSCG CGCGDCGCFK CSCPTLKGCF SCCKKPSCVS SCCCPTFKCS SCFGKPKCPK CSCWKCLKCP DTECCRSSCC CSGCFSWLCC
401: CGGGRRKEGE RRGSTTLEKS EG

Arabidopsis Description

Alpha/beta-Hydrolases superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9FVR4]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.