CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
mitochondrion 2
cytosol 2
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	nucleus
iPSORT:	mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY34308	Canola	cytosol	79.03	93.72
CDY03421	Canola	cytosol	77.42	93.59
AT4G24760.1	Thale cress	cytosol, nucleus, plastid	78.11	92.88
CDY11031	Canola	cytosol, plastid	48.39	87.87
CDY31930	Canola	cytosol	12.21	82.81
Solyc03g111770.2.1	Tomato	cytosol	64.06	74.93
PGSC0003DMT400039199	Potato	cytosol	63.59	74.39
Bra019211.1-P	Field mustard	nucleus	92.86	73.01
CDY37505	Canola	cytosol, extracellular	11.06	71.64
VIT_17s0000g09740.t01	Wine grape	cytosol, endoplasmic reticulum, nucleus	63.82	71.58
GSMUA_Achr9P02010_001	Banana	plastid	60.14	71.12
CDX91066	Canola	plastid	53.69	71.04
KRH54278	Soybean	endoplasmic reticulum	61.98	70.6
KRH63667	Soybean	cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole	61.52	70.26
GSMUA_Achr8P28640_001	Banana	plastid	59.22	70.03
GSMUA_Achr3P17130_001	Banana	plastid	59.22	70.03
CDY37504	Canola	cytosol	11.98	68.42
CDX69584	Canola	endoplasmic reticulum	58.29	68.38
CDY09851	Canola	plastid	58.06	68.11
Os12t0286600-01	Rice	cytosol, plastid	57.83	66.58
GSMUA_Achr9P07620_001	Banana	plastid	56.22	66.3
CDY32850	Canola	cytosol	52.53	66.28
OQU79022	Sorghum	cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole	55.76	65.94
CDY28668	Canola	cytosol, endoplasmic reticulum, nucleus, plastid	54.15	65.1
CDY28862	Canola	cytosol, endoplasmic reticulum, nucleus, plastid	54.15	65.1
Zm00001d030601_P001	Maize	plastid	54.61	64.58
CDX85599	Canola	cytosol	37.33	62.07
CDY20302	Canola	cytosol	37.1	60.98
CDX77081	Canola	plastid	29.49	60.66
CDY27016	Canola	plastid	47.47	60.23
CDY51065	Canola	plastid	47.47	59.88
CDY51485	Canola	cytosol	40.55	59.86
CDY13406	Canola	cytosol	40.55	59.86
CDX72285	Canola	cytosol	40.32	59.52
CDY35777	Canola	cytosol	51.61	59.42
CDX68717	Canola	cytosol	40.09	59.18
CDY23273	Canola	cytosol	40.09	59.18
CDX86348	Canola	cytosol, nucleus, plastid	52.07	59.16
CDX85290	Canola	cytosol, nucleus, plastid	51.84	58.9
CDY28238	Canola	cytosol	39.63	58.5
CDY20301	Canola	cytosol	39.4	57.97
CDY55247	Canola	cytosol	38.71	57.14
CDY34778	Canola	cytosol	38.48	56.8
CDX98113	Canola	plastid	46.31	55.22
GSMUA_Achr9P22710_001	Banana	endoplasmic reticulum, golgi	41.47	55.05
CDY56180	Canola	plastid	45.62	54.55
CDY46139	Canola	cytosol	31.57	54.37
CDY35552	Canola	plastid	37.79	46.99
CDY45906	Canola	cytosol	23.27	45.29
CDY53272	Canola	plastid	15.67	43.31
CDY22593	Canola	plastid	36.87	38.93
CDY12257	Canola	plastid	36.64	38.69
CDY43012	Canola	plastid	37.56	37.82

Protein Annotations

EnsemblPlants:CDX92650	EnsemblPlantsGene:GSBRNA2T00154461001	Gene3D:3.40.50.1820	InterPro:AB_hydrolase	InterPro:Hydrolase_4	InterPro:IPR029058
PANTHER:PTHR12277	PANTHER:PTHR12277:SF118	PFAM:PF12146	ProteinID:CDX92650	ProteinID:CDX92650.1	SEG:seg
SUPFAM:SSF53474	UniParc:UPI0004EF2A9B	MapMan:35.2	:	:	:

Description

BnaC07g39080D

Coordinates

chrLK031873:-:183959..187147

Molecular Weight (calculated)

49918.6 Da

IEP (calculated)

10.163

GRAVY (calculated)

-0.514

Length

434 amino acids

Sequence
(BLAST)

001: MGGVTSSMAA KLAFFPPNPP SYKITRDEAT ELLLMDPFPH RENVDVLRLP TRRGNEIVAM YIRYPMAVTT LLYSHGNAAD IGQMYELFIE LSIHLRVNLM
101: GYDYSGYGQS SGKPSEQNTY ADIEAAYKCL EETYGAKQEN IILYGQSVGS GPTVELATRL PRLRASILHS PILSGLRVMY PVKRTYWFDI YKNIDKISLV
201: RCPVLVIHGT ADDVVDFSHG KQLWELCQEK YEPLWLKGGN HCDLELFPEY IGHLKKFVSA VEKSASKRNS SFSRRSVERG CEQPPRHSVD APPRKSKDGR
301: EKPRKSVDRL RFQGYKLSHV ERPEKLKIPF EEMEKARRSV DIYRDKPQPM ERARKSLPFL DMHLLQIQTV MIQVISCKKK QGTEMRQREV SRFGRLTLSL
401: SICKNILSLR TMPSRRRSRK SLKSLFTTSS SRRF

Best Arabidopsis Sequence Match ( AT4G24760.1 )
(BLAST)

001: MGGVTSSMAA KLAFFPPNPP SYKLVRDETT ELFLMSPFPH RENVDILRLP TRRGTEIVAM YIRYPMAVTT LLYSHGNAAD IGQMYELFIE LSIHLRVNLM
101: GYDYSGYGQS SGKPTEQNTY ADIEAAYKCL EENYGAKQEN IILYGQSVGS GPTVDLAARL PRLRASILHS PILSGLRVMY PVKRTYWFDI YKNIDKITLV
201: RCPVLVIHGT ADDVVDFSHG KQLWELCQEK YEPLWLKGGN HCDLELFPEY IGHLKKFVSA VEKSASKRNS SFSRRSMEGC EQPPRHSVDA PRKSKDGREK
301: PRKSIDRLRF QGYKLSHIEK PEKLKVPFEE MERSRRSVDI YRDKSQPMER ARKSVDWLDR SRATE

Arabidopsis Description

Alpha/beta-Hydrolases superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9SB70]
SUBAcon: [plastid,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.