Subcellular Localization
min:
: max
Winner_takes_all: extracellular, cytosol
Predictor Summary:
Predictor Summary:
- extracellular 3
- endoplasmic reticulum 2
- vacuole 2
- plasma membrane 2
- golgi 2
- mitochondrion 2
- cytosol 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX77081 | Canola | plastid | 53.73 | 17.06 |
| CDY32850 | Canola | cytosol | 80.6 | 15.7 |
| CDX91066 | Canola | plastid | 74.63 | 15.24 |
| CDY20302 | Canola | cytosol | 59.7 | 15.15 |
| AT3G01690.1 | Thale cress | cytosol, plastid | 80.6 | 14.96 |
| CDY28668 | Canola | cytosol, endoplasmic reticulum, nucleus, plastid | 80.6 | 14.96 |
| CDY28862 | Canola | cytosol, endoplasmic reticulum, nucleus, plastid | 80.6 | 14.96 |
| GSMUA_Achr9P02010_001 | Banana | plastid | 77.61 | 14.17 |
| KRH07089 | Soybean | cytosol | 76.12 | 13.86 |
| CDX69584 | Canola | endoplasmic reticulum | 76.12 | 13.78 |
| CDY09851 | Canola | plastid | 76.12 | 13.78 |
| GSMUA_Achr3P17130_001 | Banana | plastid | 74.63 | 13.62 |
| GSMUA_Achr8P28640_001 | Banana | plastid | 74.63 | 13.62 |
| CDY20301 | Canola | cytosol | 59.7 | 13.56 |
| CDY03421 | Canola | cytosol | 71.64 | 13.37 |
| KRH58237 | Soybean | cytosol | 73.13 | 13.35 |
| KRG93968 | Soybean | cytosol | 73.13 | 13.35 |
| GSMUA_Achr9P07620_001 | Banana | plastid | 73.13 | 13.32 |
| CDY23273 | Canola | cytosol | 58.21 | 13.27 |
| CDY51485 | Canola | cytosol | 58.21 | 13.27 |
| CDX72285 | Canola | cytosol | 58.21 | 13.27 |
| CDY56180 | Canola | plastid | 71.64 | 13.22 |
| CDX98113 | Canola | plastid | 71.64 | 13.19 |
| CDY34308 | Canola | cytosol | 71.64 | 13.11 |
| VIT_14s0219g00290.t01 | Wine grape | cytosol, endoplasmic reticulum, nucleus | 71.64 | 13.04 |
| CDX68717 | Canola | cytosol | 56.72 | 12.93 |
| CDY55247 | Canola | cytosol | 56.72 | 12.93 |
| CDY34778 | Canola | cytosol | 56.72 | 12.93 |
| CDY13406 | Canola | cytosol | 56.72 | 12.93 |
| CDY28238 | Canola | cytosol | 56.72 | 12.93 |
| Solyc02g067920.2.1 | Tomato | cytosol | 70.15 | 12.7 |
| CDY46139 | Canola | cytosol | 47.76 | 12.7 |
| PGSC0003DMT400017818 | Potato | cytosol | 70.15 | 12.67 |
| CDY27016 | Canola | plastid | 64.18 | 12.57 |
| CDY51065 | Canola | plastid | 64.18 | 12.5 |
| Zm00001d030601_P001 | Maize | plastid | 65.67 | 11.99 |
| OQU79022 | Sorghum | cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole | 65.67 | 11.99 |
| Os12t0286600-01 | Rice | cytosol, plastid | 65.67 | 11.67 |
| CDY53272 | Canola | plastid | 26.87 | 11.46 |
| CDY35552 | Canola | plastid | 59.7 | 11.46 |
| CDY35777 | Canola | cytosol | 62.69 | 11.14 |
| CDX92650 | Canola | cytosol | 71.64 | 11.06 |
| CDX86348 | Canola | cytosol, nucleus, plastid | 62.69 | 10.99 |
| CDX85290 | Canola | cytosol, nucleus, plastid | 62.69 | 10.99 |
| CDY31930 | Canola | cytosol | 10.45 | 10.94 |
| CDY43012 | Canola | plastid | 61.19 | 9.51 |
| CDY22593 | Canola | plastid | 58.21 | 9.49 |
| CDY12257 | Canola | plastid | 58.21 | 9.49 |
| CDY37504 | Canola | cytosol | 5.97 | 5.26 |
| GSMUA_Achr9P22710_001 | Banana | endoplasmic reticulum, golgi | 22.39 | 4.59 |
| CDX85599 | Canola | cytosol | 11.94 | 3.07 |
| CDY11031 | Canola | cytosol, plastid | 7.46 | 2.09 |
| CDY45906 | Canola | cytosol | 5.97 | 1.79 |
Protein Annotations
| EnsemblPlants:CDY37505 | EnsemblPlantsGene:GSBRNA2T00064120001 | PANTHER:PTHR12277 | PANTHER:PTHR12277:SF118 | ProteinID:CDY37505 | ProteinID:CDY37505.1 |
| UniParc:UPI0004EE8EE3 | UniProt:A0A078HGP4 | MapMan:35.2 | : | : | : |
Description
BnaA05g33700DBnaA05g33700D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HGP4]
Coordinates
chrLK032402:-:20259..21171
Molecular Weight (calculated)
7241.9 Da
IEP (calculated)
9.532
GRAVY (calculated)
0.097
Length
67 amino acids
Sequence
(BLAST)
(BLAST)
1: MGGMTSSVAA KLAFFPPSPP SYKVVTDKVT GQTLSIHLKV NLMGYDYTGY GQSTGKSFLH EPLMLML
001: MGGVTSSIAA KFAFFPPSPP SYGFVSDVDR LYITEVPRRD DVDVLKLKTR RGNEIVAIYI KHPKANGTLL YSHGNAADLG QMFELFIELS NRLRLNLMGY
101: DYSGYGQSTG KASECNTYAD IDAAYTCLKE HYGVKDDQLI LYGQSVGSGP TIDLASRTPN LRGVVLHSPI LSGMRVLYPV KRTYWFDIYK NIDKIGAVTC
201: PVLVIHMKWL IVLMENNFGN FQKKSMSLYG YLEEDTAI
101: DYSGYGQSTG KASECNTYAD IDAAYTCLKE HYGVKDDQLI LYGQSVGSGP TIDLASRTPN LRGVVLHSPI LSGMRVLYPV KRTYWFDIYK NIDKIGAVTC
201: PVLVIHMKWL IVLMENNFGN FQKKSMSLYG YLEEDTAI
Arabidopsis Description
Alpha/beta-Hydrolases superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9FF34]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.