Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY57012 | Canola | cytosol | 94.45 | 95.16 |
| CDX86212 | Canola | cytosol | 87.06 | 87.55 |
| CDY48668 | Canola | cytosol | 87.06 | 87.55 |
| AT5G28900.1 | Thale cress | cytosol | 86.69 | 87.5 |
| AT5G28850.2 | Thale cress | cytosol | 86.69 | 87.5 |
| KRG97049 | Soybean | cytosol | 53.79 | 85.84 |
| GSMUA_Achr8P19010_001 | Banana | cytosol | 50.83 | 83.84 |
| CDY71370 | Canola | extracellular | 37.15 | 83.75 |
| KRH68797 | Soybean | cytosol | 75.23 | 75.79 |
| KRH34156 | Soybean | cytosol | 74.12 | 74.67 |
| Solyc04g010070.2.1 | Tomato | plastid | 74.12 | 74.4 |
| KRG92626 | Soybean | cytosol | 73.75 | 74.3 |
| CDY44814 | Canola | cytosol | 73.01 | 73.15 |
| Solyc05g054980.2.1 | Tomato | cytosol | 72.83 | 73.1 |
| GSMUA_AchrUn_... | Banana | cytosol | 72.83 | 72.69 |
| GSMUA_Achr11P... | Banana | cytosol | 72.64 | 72.64 |
| Os10t0476600-01 | Rice | cytosol, plasma membrane, plastid | 71.35 | 71.35 |
| EER94083 | Sorghum | cytosol | 70.61 | 70.61 |
| TraesCS1A01G153900.1 | Wheat | cytosol | 70.24 | 70.24 |
| HORVU1Hr1G040980.1 | Barley | cytosol | 70.06 | 70.06 |
| TraesCS1D01G152300.1 | Wheat | cytosol | 70.06 | 70.06 |
| TraesCS1B01G171200.1 | Wheat | cytosol | 69.87 | 69.87 |
| Zm00001d032708_P009 | Maize | cytosol | 69.5 | 69.63 |
| CDX86655 | Canola | cytosol | 64.69 | 66.41 |
| Zm00001d014037_P004 | Maize | cytosol | 69.69 | 65.68 |
| CDY13127 | Canola | cytosol | 64.14 | 65.23 |
| CDY36971 | Canola | cytosol | 63.59 | 64.91 |
| CDY15483 | Canola | cytosol | 63.59 | 64.42 |
| KRG97048 | Soybean | nucleus | 21.07 | 57.87 |
| CDY13902 | Canola | cytosol | 16.45 | 19.91 |
| CDY58103 | Canola | nucleus | 17.19 | 19.29 |
| CDX92599 | Canola | nucleus | 17.01 | 19.17 |
| CDX70827 | Canola | nucleus | 16.64 | 19.11 |
| CDY02615 | Canola | nucleus | 17.01 | 19.09 |
| CDX88930 | Canola | nucleus | 17.19 | 18.98 |
Protein Annotations
| Gene3D:1.10.238.10 | Gene3D:1.10.238.220 | MapMan:18.4.24.1.2.4 | GO:A0A078ED79 | EnsemblPlants:CDY00020 | ProteinID:CDY00020 |
| ProteinID:CDY00020.1 | InterPro:EF-hand-dom_pair | InterPro:EF_Hand_1_Ca_BS | InterPro:EF_hand_dom | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005509 | EnsemblPlantsGene:GSBRNA2T00109497001 | InterPro:IPR002048 | PFAM:PF13202 | PFAM:PF13499 | ScanProsite:PS00018 |
| PFscan:PS50222 | PANTHER:PTHR14095 | PANTHER:PTHR14095:SF7 | SUPFAM:SSF47473 | UniParc:UPI0004EE16F4 | SEG:seg |
Description
BnaC09g02810D
Coordinates
chrLK031916:-:254798..258159
Molecular Weight (calculated)
62553.3 Da
IEP (calculated)
4.712
GRAVY (calculated)
-0.364
Length
541 amino acids
Sequence
(BLAST)
(BLAST)
001: MSMVDAIVPG ADMSRVDADL LQLQEMSSFV LTSKPGFTQS LFDQWLSLPQ AHQQIASLLH DALAGSTLNV ATGSSSAASN SIPSMFPAGS AAPPLSPRSC
101: GSPRMTRQRA GLSNLGSSLK PTTIEPAKEP MPQFYFENGR PPPSEMKEQC MFRINHFFYG HIDGLQIQEF KLVTREICKL PSFFSTSLFR KIDVNNTGFV
201: TREAFIDYWV NGNMLIMDTT TQIFKILKQQ NQNYIVKDDF KPLLKELLAT HPGLEFLQTT PEFQERYAET VTYRIFYYIN RSGNGRLTFR ELRRGNLIDA
301: MIHADQEEDI NKVLRYFSYE HFYVIYCKFW ELDTDHDFLI DKENLMRYGN HALTFRIVDR IFSQVGRKFT SKVEGKMGYE DFVYFILAEE DKSSEPSLEY
401: WFNCIDLDGN GIITRNEMQF FYEEQLRRME CMAQEAVLFE DILCQMIDMI GPENESHVTL QDLKGSKLSG NVFNILFNLN KFMAFETRDP FLIRQERENP
501: TLTEWDRFAH REYVRLSMEE DVEDASNGSA EAWDESLESP F
101: GSPRMTRQRA GLSNLGSSLK PTTIEPAKEP MPQFYFENGR PPPSEMKEQC MFRINHFFYG HIDGLQIQEF KLVTREICKL PSFFSTSLFR KIDVNNTGFV
201: TREAFIDYWV NGNMLIMDTT TQIFKILKQQ NQNYIVKDDF KPLLKELLAT HPGLEFLQTT PEFQERYAET VTYRIFYYIN RSGNGRLTFR ELRRGNLIDA
301: MIHADQEEDI NKVLRYFSYE HFYVIYCKFW ELDTDHDFLI DKENLMRYGN HALTFRIVDR IFSQVGRKFT SKVEGKMGYE DFVYFILAEE DKSSEPSLEY
401: WFNCIDLDGN GIITRNEMQF FYEEQLRRME CMAQEAVLFE DILCQMIDMI GPENESHVTL QDLKGSKLSG NVFNILFNLN KFMAFETRDP FLIRQERENP
501: TLTEWDRFAH REYVRLSMEE DVEDASNGSA EAWDESLESP F
001: MVDTVIPGDM ACLDADLLQL QEMSSFVLNS KPGFTQKLFD QWLSLPEAQR QVGSLLKDAV AGAPINVTGS ASGSNSATIP SMFPAGSAPP LSPRSCGSPR
101: TTKQRAPSNL GSTLKVVNEP VKEPIPQFYF QNGRPPPSEI KEQCMFRINH FFYGHMDGLQ IQEFKLVTRE ICKLPSFFST SLFRKIDLNN TGFVTRDAFI
201: DFWVNGNMLI MDTTTQIFKI LKQKDQSFIV KDDFKPLLKE LLATHPGLEF LQSTPEFQER YAETVTYRIF YYINRSGNGR ITFRELKRGN LIDAMLHADE
301: EEDINKVLRY FSYEHFYVIY CKFWELDTDH DFLIDKENLM RYGNHALTYR IVDRIFSQVA RKFTSKVEGK MGYEDFVYFI LAEEDKSSVP SLEYWFKCID
401: LDANGIITRN EMQFFYEEQL HRMECMAQEA VLFEDILCQM IDMIGPENES HITLHDLKGS KLSGNVFNIL FNLNKFMAFE TRDPFLIRQE RENPTLTDWD
501: RFAHREYIRL SMEEDVEDAS NGSAEVWDDS SLEAPF
101: TTKQRAPSNL GSTLKVVNEP VKEPIPQFYF QNGRPPPSEI KEQCMFRINH FFYGHMDGLQ IQEFKLVTRE ICKLPSFFST SLFRKIDLNN TGFVTRDAFI
201: DFWVNGNMLI MDTTTQIFKI LKQKDQSFIV KDDFKPLLKE LLATHPGLEF LQSTPEFQER YAETVTYRIF YYINRSGNGR ITFRELKRGN LIDAMLHADE
301: EEDINKVLRY FSYEHFYVIY CKFWELDTDH DFLIDKENLM RYGNHALTYR IVDRIFSQVA RKFTSKVEGK MGYEDFVYFI LAEEDKSSVP SLEYWFKCID
401: LDANGIITRN EMQFFYEEQL HRMECMAQEA VLFEDILCQM IDMIGPENES HITLHDLKGS KLSGNVFNIL FNLNKFMAFE TRDPFLIRQE RENPTLTDWD
501: RFAHREYIRL SMEEDVEDAS NGSAEVWDDS SLEAPF
Arabidopsis Description
B''BETASerine/threonine protein phosphatase 2A regulatory subunit B''beta [Source:UniProtKB/Swiss-Prot;Acc:Q5QIT3]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.