CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, endoplasmic reticulum, vacuole

Predictor Summary:

extracellular 6
golgi 5
plasma membrane 5
endoplasmic reticulum 6
vacuole 6

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, extracellular, vacuole
Any Predictor:	secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY41945	Canola	extracellular	67.07	94.47
CDY12101	Canola	extracellular, plasma membrane, vacuole	84.89	63.15
AT4G38770.1	Thale cress	extracellular, plasma membrane, vacuole	84.59	62.5
CDY15914	Canola	extracellular, golgi, vacuole	59.52	56.94
CDX99616	Canola	extracellular, golgi, vacuole	58.61	55.59
KRH60720	Soybean	extracellular	38.67	42.95
KRH29118	Soybean	nucleus	19.94	41.77
PGSC0003DMT400011345	Potato	extracellular	26.28	39.55
PGSC0003DMT400003134	Potato	cytosol	27.79	37.1
Solyc10g054900.1.1	Tomato	extracellular	25.08	36.09
VIT_03s0038g01850.t01	Wine grape	extracellular	41.69	35.38
VIT_03s0038g01860.t01	Wine grape	extracellular, plasma membrane	41.09	34.87
VIT_03s0038g01830.t01	Wine grape	extracellular, plasma membrane, vacuole	52.27	34.53
TraesCS2A01G061800.1	Wheat	extracellular	21.45	33.81
TraesCS2B01G075500.1	Wheat	extracellular	16.92	33.73
TraesCS2A01G062200.1	Wheat	extracellular	21.15	33.18
TraesCS2B01G075700.1	Wheat	extracellular	21.15	33.18
TraesCS2A01G062900.1	Wheat	extracellular	20.85	32.86
TraesCS2D01G061400.1	Wheat	extracellular	20.85	32.86
TraesCSU01G155600.1	Wheat	extracellular	16.01	32.52
TraesCS2A01G062700.1	Wheat	extracellular	20.24	32.37
TraesCS2A01G062100.1	Wheat	extracellular	20.54	32.23
TraesCS2D01G061000.1	Wheat	extracellular	20.54	32.23
TraesCS2D01G061300.1	Wheat	extracellular	20.54	32.23
TraesCS2B01G075800.1	Wheat	extracellular	20.24	32.21
TraesCS2A01G062800.1	Wheat	extracellular	20.24	31.9
TraesCSU01G024700.1	Wheat	extracellular	15.71	31.9
TraesCS2A01G062400.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	16.62	31.79
TraesCS2A01G062600.1	Wheat	extracellular	20.54	31.78
TraesCS2A01G061900.1	Wheat	extracellular	20.24	31.75
TraesCSU01G024800.1	Wheat	extracellular	20.24	31.6
TraesCS2A01G063100.1	Wheat	extracellular	19.94	31.58
TraesCS2A01G063000.1	Wheat	extracellular	20.54	31.48
TraesCS2B01G075600.1	Wheat	extracellular	19.94	31.43
TraesCSU01G146800.1	Wheat	extracellular	19.94	31.43
TraesCSU01G201000.1	Wheat	extracellular	19.94	31.43
TraesCSU01G207300.1	Wheat	extracellular	19.94	31.43
TraesCSU01G242600.1	Wheat	extracellular	19.94	31.43
TraesCSU01G242700.1	Wheat	extracellular	19.94	31.43
TraesCSU01G243700.2	Wheat	extracellular	19.94	31.43
TraesCS2B01G075400.1	Wheat	extracellular	19.64	31.4
Os10t0150300-01	Rice	extracellular	18.43	31.12
TraesCS2B01G075300.1	Wheat	extracellular	19.64	30.95
TraesCS2D01G061100.1	Wheat	extracellular	19.64	30.81
TraesCS2D01G061200.1	Wheat	endoplasmic reticulum, extracellular, plasma membrane	16.31	30.51
TraesCSU01G024500.1	Wheat	endoplasmic reticulum, extracellular, plasma membrane	16.31	30.51
TraesCSU01G225700.1	Wheat	endoplasmic reticulum, extracellular, plasma membrane	16.31	30.51
TraesCSU01G146900.1	Wheat	extracellular	19.34	30.33
TraesCSU01G208500.1	Wheat	extracellular	19.34	30.33
HORVU2Hr1G011490.1	Barley	extracellular, plasma membrane	20.24	30.32
TraesCS2A01G062000.1	Wheat	extracellular	19.03	29.86
TraesCSU01G264800.1	Wheat	extracellular	19.03	29.86
Os10t0150600-01	Rice	extracellular	20.54	29.69
Os10t0150700-01	Rice	extracellular	20.24	29.26
Zm00001d030314_P001	Maize	extracellular	19.34	29.09
GSMUA_AchrUn_...	Banana	extracellular	23.57	28.89
Os10t0150800-01	Rice	extracellular	19.94	28.82
Os10t0150400-01	Rice	extracellular	19.34	28.57
Os10t0150000-01	Rice	cytosol, nucleus, plastid	9.97	28.21
Os03t0245300-01	Rice	extracellular	21.15	27.89
PGSC0003DMT400004126	Potato	extracellular, plasma membrane, vacuole	49.24	27.82
Os10t0149400-00	Rice	cytosol	17.22	27.8
Os10t0149000-00	Rice	extracellular	18.13	27.4
Os10t0149200-01	Rice	extracellular	18.43	27.23
Os10t0149100-00	Rice	cytosol, nucleus	12.39	27.15
Os10t0149800-00	Rice	extracellular	16.62	26.7
Zm00001d030305_P001	Maize	extracellular	19.94	26.09
GSMUA_Achr5P11390_001	Banana	extracellular, golgi	29.0	26.02
EER91738	Sorghum	mitochondrion	19.03	25.61
TraesCS4B01G225800.1	Wheat	extracellular	18.13	25.53
TraesCS4D01G226500.1	Wheat	extracellular	18.13	25.53
TraesCS4A01G068700.1	Wheat	extracellular	18.13	25.42
EER92565	Sorghum	extracellular	19.64	25.1
TraesCS6A01G103600.1	Wheat	extracellular	20.54	25.0
EER94343	Sorghum	extracellular	19.94	24.81
TraesCS6D01G092200.1	Wheat	extracellular	21.45	24.48
HORVU2Hr1G011430.8	Barley	extracellular	21.15	23.81
Zm00001d047934_P001	Maize	extracellular	19.64	23.64
Os10t0148100-01	Rice	extracellular	19.34	23.62
TraesCS4D01G226700.1	Wheat	extracellular, plasma membrane, vacuole	18.73	23.4
TraesCS4A01G068900.1	Wheat	extracellular, golgi, vacuole	19.34	22.78
HORVU4Hr1G063490.1	Barley	golgi, mitochondrion, plasma membrane, plastid	18.13	22.73
TraesCS4B01G226000.1	Wheat	extracellular, golgi, vacuole	17.82	22.61
Os10t0148700-01	Rice	extracellular	20.54	22.59
Zm00001d028405_P002	Maize	extracellular	19.03	22.34
Zm00001d047933_P001	Maize	endoplasmic reticulum, extracellular, plasma membrane	17.52	22.14
HORVU4Hr1G063610.1	Barley	endoplasmic reticulum, extracellular	18.73	22.06
HORVU2Hr1G011470.1	Barley	mitochondrion	14.8	21.59
Os07t0484900-01	Rice	cytosol	6.95	21.5
EER92564	Sorghum	extracellular	16.62	21.48
EER91737	Sorghum	extracellular	21.15	21.08
HORVU2Hr1G011420.1	Barley	cytosol	22.05	20.0
HORVU2Hr1G011530.1	Barley	plastid	6.65	18.49
HORVU3Hr1G114320.1	Barley	extracellular, plasma membrane	22.96	17.92
Zm00001d030316_P001	Maize	extracellular	25.98	17.88
Os03t0245200-01	Rice	extracellular	12.39	17.3
HORVU6Hr1G018670.1	Barley	endoplasmic reticulum	23.87	16.32
EER94340	Sorghum	extracellular	25.08	15.84
TraesCS3A01G524900.1	Wheat	extracellular, plasma membrane	23.87	15.49
TraesCS3D01G530100.1	Wheat	extracellular, plasma membrane	24.17	15.33
TraesCS3B01G592200.1	Wheat	extracellular, plasma membrane	23.26	14.81

Protein Annotations

EnsemblPlants:CDY66796	EnsemblPlantsGene:GSBRNA2T00055768001	PANTHER:PTHR23201	PANTHER:PTHR23201:SF16	PFAM:PF01190	ProteinID:CDY66796
ProteinID:CDY66796.1	SEG:seg	SignalP:SignalP-noTM	UniParc:UPI0004EC5C60	UniProt:A0A078JM30	MapMan:35.1

Description

BnaCnng52390DBnaCnng52390D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JM30]

Coordinates

chrLK035473:+:3952..5347

Molecular Weight (calculated)

36411.2 Da

IEP (calculated)

9.771

GRAVY (calculated)

-0.401

Length

331 amino acids

Sequence
(BLAST)

001: MRILPEPLGS VPCLILLVSS VLFSATLSLA RVVEVVGYAE SKIKNPHAFT GLRVTIECKG EKGHFVTKGS GNIDEEGKFG LKVLPHDIIS DDGALKEECY
101: AQLHSAAGAP CPAHDGLESN KIVFLYTSGD KHVLGLKQNL RFTPELCVSK FFWPMPKFPP VKGFEHHFPL PPPFPKFKKP CPPPPEEVPP PPKVELPPPV
201: PVHDPPPKVE LPPPAPKKPC PPKSPKIEHP PPVPVYKPPP KIEHSPPKKP CPPPVHVHKP PPKKACPPKI ELPPPVPIYK PPPKIEHPPI YVPPVVIPKK
301: PCPPLPKFPH LPPKYIHHPK FGKWPPLPTH P

Best Arabidopsis Sequence Match ( AT4G38770.1 )
(BLAST)

001: MRILPEPRGS VPCLLLLVSV LLSATLSLAR VVEVVGYAES KIKTPHAFSG LRVTIDCKVN KGHFVTKGSG NIDDKGKFGL NIPHDIVSDN GALKEECYAQ
101: LHSAAGTPCP AHDGLESTKI VFLSKSGDKH ILGLKQNLKF SPEICVSKFF WPMPKLPPFK GFDHPFPLPP PLELPPFLKK PCPPKYSPPV EVPPPVPVYE
201: PPPKKEIPPP VPVYDPPPKK EVPPPVPVYK PPPKVELPPP IPKKPCPPKP PKIEHPPPVP VYKPPPKIEK PPPVPVYKPP PKIEHPPPVP VHKLPKKPCP
301: PKKVDPPPVP VHKPPTKKPC PPKKVDPPPV PVHKPPPKIV IPPPKIEHPP PVPVYKPPPK IEHPPIYIPP IVKKPCPPPV PIYKPPVVIP KKPCPPPVPV
401: YKPPVVVIPK KPCPPLPQLP PLPKFPPLPP KYIHHPKFGK WPPLPPHP

Arabidopsis Description

PRP4Proline-rich protein 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9T0I5]
SUBAcon: [extracellular,plasma membrane,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.