Subcellular Localization
min:
: max
Winner_takes_all: golgi, extracellular, vacuole
Predictor Summary:
Predictor Summary:
- extracellular 5
- endoplasmic reticulum 4
- vacuole 5
- plasma membrane 4
- golgi 5
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4D01G226700.1 | Wheat | extracellular, plasma membrane, vacuole | 88.51 | 87.17 |
| TraesCS4A01G068900.1 | Wheat | extracellular, golgi, vacuole | 89.66 | 83.27 |
| HORVU4Hr1G063610.1 | Barley | endoplasmic reticulum, extracellular | 86.21 | 80.07 |
| EER92565 | Sorghum | extracellular | 54.79 | 55.21 |
| TraesCS2B01G075500.1 | Wheat | extracellular | 33.72 | 53.01 |
| Zm00001d047934_P001 | Maize | extracellular | 54.02 | 51.27 |
| TraesCS2B01G075800.1 | Wheat | extracellular | 37.55 | 47.12 |
| Zm00001d028405_P002 | Maize | extracellular | 50.57 | 46.81 |
| TraesCS2B01G075400.1 | Wheat | extracellular | 36.78 | 46.38 |
| TraesCS2B01G075600.1 | Wheat | extracellular | 36.78 | 45.71 |
| TraesCS2B01G075700.1 | Wheat | extracellular | 36.78 | 45.5 |
| TraesCS2B01G075300.1 | Wheat | extracellular | 35.63 | 44.29 |
| Os03t0245200-01 | Rice | extracellular | 34.87 | 38.4 |
| KRH29118 | Soybean | nucleus | 20.31 | 33.54 |
| TraesCS4B01G225800.1 | Wheat | extracellular | 29.5 | 32.77 |
| GSMUA_AchrUn_... | Banana | extracellular | 29.5 | 28.52 |
| PGSC0003DMT400011345 | Potato | extracellular | 23.37 | 27.73 |
| Solyc10g054900.1.1 | Tomato | extracellular | 23.37 | 26.52 |
| GSMUA_Achr5P11390_001 | Banana | extracellular, golgi | 35.25 | 24.93 |
| PGSC0003DMT400003134 | Potato | cytosol | 22.99 | 24.19 |
| KRH60720 | Soybean | extracellular | 24.9 | 21.81 |
| VIT_03s0038g01850.t01 | Wine grape | extracellular | 27.59 | 18.46 |
| CDY66796 | Canola | endoplasmic reticulum, extracellular, vacuole | 22.61 | 17.82 |
| VIT_03s0038g01860.t01 | Wine grape | extracellular, plasma membrane | 26.44 | 17.69 |
| AT2G21140.1 | Thale cress | extracellular, plasma membrane | 21.46 | 17.45 |
| CDY15914 | Canola | extracellular, golgi, vacuole | 22.22 | 16.76 |
| TraesCS3B01G592200.1 | Wheat | extracellular, plasma membrane | 32.57 | 16.35 |
| Bra030319.1-P | Field mustard | extracellular | 21.84 | 16.01 |
| VIT_03s0038g01830.t01 | Wine grape | extracellular, plasma membrane, vacuole | 30.27 | 15.77 |
| CDX99616 | Canola | extracellular, golgi, vacuole | 21.07 | 15.76 |
| CDY41945 | Canola | extracellular | 13.41 | 14.89 |
| AT4G38770.1 | Thale cress | extracellular, plasma membrane, vacuole | 24.52 | 14.29 |
| Bra011893.1-P | Field mustard | extracellular, vacuole | 13.41 | 14.17 |
| CDY12101 | Canola | extracellular, plasma membrane, vacuole | 24.14 | 14.16 |
| Bra010727.1-P | Field mustard | extracellular, plasma membrane, vacuole | 24.14 | 13.64 |
| PGSC0003DMT400004126 | Potato | extracellular, plasma membrane, vacuole | 29.12 | 12.97 |
Protein Annotations
| EnsemblPlants:TraesCS4B01G226000.1 | EnsemblPlantsGene:TraesCS4B01G226000 | PANTHER:PTHR33935 | PANTHER:PTHR33935:SF2 | PFAM:PF01190 | SEG:seg |
| SignalP:SignalP-noTM | MapMan:35.2 | : | : | : | : |
Description
No Description!
Coordinates
chr4B:+:472423710..472429012
Molecular Weight (calculated)
28240.7 Da
IEP (calculated)
7.517
GRAVY (calculated)
-0.334
Length
261 amino acids
Sequence
(BLAST)
(BLAST)
001: MALLPRRFLF GVCAVVLVIG LANSVHGEAA PVVVGLARCS DCTRKNMNTE AAFKGLQAAV KCKNGEGEYE SKAAGHVDNS GAFSVPLNVG LVGDDGELKQ
101: DCFAQLHSAS GAPCPGQEPS KIIAARPGRD GQTTFVALAG EVHRPLAECA SAFLCHPLHN HHLAVFHKPV IVRPKPDHYH DHDHDHGHDH DHDHHHDQDL
201: PPAVNKPPTT PVYTPTMPTP TPIYHPTAQR DAVTEPQLFK KMLLFLKKLP FFPPAKQSGK P
101: DCFAQLHSAS GAPCPGQEPS KIIAARPGRD GQTTFVALAG EVHRPLAECA SAFLCHPLHN HHLAVFHKPV IVRPKPDHYH DHDHDHGHDH DHDHHHDQDL
201: PPAVNKPPTT PVYTPTMPTP TPIYHPTAQR DAVTEPQLFK KMLLFLKKLP FFPPAKQSGK P
001: MRILPKSGGG ALCLLFVFAL CSVAHSLSCD VKVVGDVEVI GYSEISKIKI PNAFSGLRVT IECKAADSKG HFVTRGSGEV DETGKFHLNI PHDIVGDDGT
101: LKEACYAHLQ SAFGNPCPAH DGLEASKIVF LSKSGQNHVL GLKKSLKFSP EVCISKFFWH MPKFPLPPPL NLPPLTFPKI KKPCPPIYKP PVVIPKKPCP
201: PKIAHKPIYK PPVPIYKPPV PIYKPPVVIP KKPCPPKIHK PIYKPPVPIY KPPVVIPKKT FPPLHKPIYK HPVPIYKPIF KPPVVVIPKK PCPPLPKFPH
301: FPPKYIPHPK FGKWPPFPSH P
101: LKEACYAHLQ SAFGNPCPAH DGLEASKIVF LSKSGQNHVL GLKKSLKFSP EVCISKFFWH MPKFPLPPPL NLPPLTFPKI KKPCPPIYKP PVVIPKKPCP
201: PKIAHKPIYK PPVPIYKPPV PIYKPPVVIP KKPCPPKIHK PIYKPPVPIY KPPVVIPKKT FPPLHKPIYK HPVPIYKPIF KPPVVVIPKK PCPPLPKFPH
301: FPPKYIPHPK FGKWPPFPSH P
Arabidopsis Description
PRP2Proline-rich protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SKP9]
SUBAcon: [plasma membrane,extracellular]
SUBAcon: [plasma membrane,extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.