Factsheet for TraesCS4A01G068900.1

Subcellular Localization

min:

: max

Winner_takes_all: golgi, extracellular, vacuole

Predictor Summary:

extracellular 5
endoplasmic reticulum 4
vacuole 5
plasma membrane 4
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, golgi, vacuole
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4D01G226700.1	Wheat	extracellular, plasma membrane, vacuole	90.39	95.85
HORVU4Hr1G063610.1	Barley	endoplasmic reticulum, extracellular	89.68	89.68
TraesCS4B01G226000.1	Wheat	extracellular, golgi, vacuole	83.27	89.66
EER92565	Sorghum	extracellular	53.38	57.92
TraesCS6A01G103600.1	Wheat	extracellular	54.09	55.88
Zm00001d047934_P001	Maize	extracellular	52.31	53.45
TraesCS2A01G062700.1	Wheat	extracellular	37.37	50.72
Zm00001d028405_P002	Maize	extracellular	50.89	50.71
TraesCS2A01G061800.1	Wheat	extracellular	37.37	50.0
TraesCS2A01G062900.1	Wheat	extracellular	37.37	50.0
TraesCS2A01G062800.1	Wheat	extracellular	37.01	49.52
TraesCS2A01G061900.1	Wheat	extracellular	37.01	49.29
TraesCS2A01G062200.1	Wheat	extracellular	36.65	48.82
TraesCS2A01G062400.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	29.89	48.55
TraesCS2A01G062100.1	Wheat	extracellular	36.3	48.34
TraesCS2A01G063000.1	Wheat	extracellular	37.01	48.15
TraesCS2A01G062000.1	Wheat	extracellular	35.59	47.39
TraesCS2A01G062600.1	Wheat	extracellular	35.94	47.2
TraesCS2A01G063100.1	Wheat	extracellular	34.52	46.41
Os03t0245200-01	Rice	extracellular	34.88	41.35
TraesCS4A01G068700.1	Wheat	extracellular	30.25	36.02
KRH29118	Soybean	nucleus	18.51	32.91
GSMUA_AchrUn_...	Banana	extracellular	29.18	30.37
PGSC0003DMT400011345	Potato	extracellular	23.13	29.55
Solyc10g054900.1.1	Tomato	extracellular	23.13	28.26
PGSC0003DMT400003134	Potato	cytosol	22.78	25.81
GSMUA_Achr5P11390_001	Banana	extracellular, golgi	33.81	25.75
KRH60720	Soybean	extracellular	22.78	21.48
VIT_03s0038g01850.t01	Wine grape	extracellular	27.4	19.74
AT2G21140.1	Thale cress	extracellular, plasma membrane	22.42	19.63
CDY66796	Canola	endoplasmic reticulum, extracellular, vacuole	22.78	19.34
CDY15914	Canola	extracellular, golgi, vacuole	23.13	18.79
VIT_03s0038g01860.t01	Wine grape	extracellular, plasma membrane	25.98	18.72
TraesCS3A01G524900.1	Wheat	extracellular, plasma membrane	32.74	18.04
Bra030319.1-P	Field mustard	extracellular	22.78	17.98
CDX99616	Canola	extracellular, golgi, vacuole	22.06	17.77
VIT_03s0038g01830.t01	Wine grape	extracellular, plasma membrane, vacuole	29.18	16.37
CDY41945	Canola	extracellular	13.52	16.17
AT4G38770.1	Thale cress	extracellular, plasma membrane, vacuole	24.91	15.62
Bra011893.1-P	Field mustard	extracellular, vacuole	13.52	15.38
CDY12101	Canola	extracellular, plasma membrane, vacuole	24.2	15.28
Bra010727.1-P	Field mustard	extracellular, plasma membrane, vacuole	24.91	15.15
PGSC0003DMT400004126	Potato	extracellular, plasma membrane, vacuole	27.05	12.97

Protein Annotations

EnsemblPlants:TraesCS4A01G068900.1	EnsemblPlantsGene:TraesCS4A01G068900	PANTHER:PTHR33935	PANTHER:PTHR33935:SF2	PFAM:PF01190	SEG:seg
SignalP:SignalP-noTM	MapMan:35.2	:	:	:	:

Description

No Description!

Coordinates

chr4A:+:67259967..67260908

Molecular Weight (calculated)

30359.6 Da

IEP (calculated)

6.925

GRAVY (calculated)

-0.566

Length

281 amino acids

Sequence
(BLAST)

001: MALLPRRFLF GVCAVALAIG LANAVHGEAA PVVVGLARCS DCTRKSMNAE AAFKGLQVAV KCKNGKGEYQ SKAVGHVDKS GAFSVPLDAG LVGDDGELKQ
101: DCFAQLHSAS GAPCPGQEPS KIVATRPGRD GQTTFVALAG EVHQPSAECA SAFLCHPLHK HHLVVFHKPV TVPPKPDHDH DHDHDHDHDN DHDHDHDHDH
201: GHDHDHDHGH DHDHDHDHSL PPAVKPPTTP VYTPTAPTPT PIYHPRAQRD AVTEPQLFKK MLPFLKKLPF FPPAKQSGGK P

Best Arabidopsis Sequence Match ( AT2G21140.1 )
(BLAST)

001: MRILPKSGGG ALCLLFVFAL CSVAHSLSCD VKVVGDVEVI GYSEISKIKI PNAFSGLRVT IECKAADSKG HFVTRGSGEV DETGKFHLNI PHDIVGDDGT
101: LKEACYAHLQ SAFGNPCPAH DGLEASKIVF LSKSGQNHVL GLKKSLKFSP EVCISKFFWH MPKFPLPPPL NLPPLTFPKI KKPCPPIYKP PVVIPKKPCP
201: PKIAHKPIYK PPVPIYKPPV PIYKPPVVIP KKPCPPKIHK PIYKPPVPIY KPPVVIPKKT FPPLHKPIYK HPVPIYKPIF KPPVVVIPKK PCPPLPKFPH
301: FPPKYIPHPK FGKWPPFPSH P

Arabidopsis Description

PRP2Proline-rich protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SKP9]
SUBAcon: [plasma membrane,extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.