Factsheet for TraesCS2A01G062000.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 7
endoplasmic reticulum 4
vacuole 4
plasma membrane 4
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2D01G061000.1	Wheat	extracellular	91.94	91.94
TraesCS2D01G061100.1	Wheat	extracellular	90.52	90.52
TraesCS2B01G075300.1	Wheat	extracellular	89.57	90.0
TraesCSU01G024800.1	Wheat	extracellular	89.57	89.15
TraesCS2A01G062200.1	Wheat	extracellular	88.63	88.63
TraesCS2A01G061800.1	Wheat	extracellular	87.68	88.1
TraesCS2A01G062700.1	Wheat	extracellular	86.26	87.92
TraesCS2A01G061900.1	Wheat	extracellular	87.2	87.2
TraesCS2A01G062100.1	Wheat	extracellular	86.26	86.26
TraesCS2A01G062900.1	Wheat	extracellular	84.36	84.76
TraesCS2A01G063100.1	Wheat	extracellular	83.41	84.21
TraesCS2A01G062800.1	Wheat	extracellular	83.41	83.81
TraesCS2A01G062600.1	Wheat	extracellular	83.89	82.71
HORVU2Hr1G011490.1	Barley	extracellular, plasma membrane	84.36	80.54
TraesCS2A01G063000.1	Wheat	extracellular	81.99	80.09
TraesCS2A01G062400.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	56.87	69.36
HORVU2Hr1G011430.8	Barley	extracellular	85.31	61.22
Os10t0150400-01	Rice	extracellular	63.51	59.82
Os10t0150300-01	Rice	extracellular	55.45	59.69
Os10t0150700-01	Rice	extracellular	63.98	58.95
Os10t0150800-01	Rice	extracellular	63.98	58.95
Os10t0150600-01	Rice	extracellular	62.09	57.21
Zm00001d030314_P001	Maize	extracellular	57.35	55.0
Os07t0484900-01	Rice	cytosol	25.59	50.47
EER91738	Sorghum	mitochondrion	56.4	48.37
TraesCS6A01G103600.1	Wheat	extracellular	47.87	37.13
TraesCS4A01G068700.1	Wheat	extracellular	41.23	36.86
EER91737	Sorghum	extracellular	56.4	35.84
TraesCS4A01G068900.1	Wheat	extracellular, golgi, vacuole	47.39	35.59
KRH29118	Soybean	nucleus	24.64	32.91
GSMUA_AchrUn_...	Banana	extracellular	38.86	30.37
Zm00001d030316_P001	Maize	extracellular	64.93	28.48
EER94340	Sorghum	extracellular	64.45	25.95
Solyc10g054900.1.1	Tomato	extracellular	27.49	25.22
PGSC0003DMT400011345	Potato	extracellular	26.07	25.0
GSMUA_Achr5P11390_001	Banana	extracellular, golgi	42.65	24.39
PGSC0003DMT400003134	Potato	cytosol	27.49	23.39
KRH60720	Soybean	extracellular	29.38	20.81
TraesCS3A01G524900.1	Wheat	extracellular, plasma membrane	47.39	19.61
CDY66796	Canola	endoplasmic reticulum, extracellular, vacuole	29.86	19.03
AT2G21140.1	Thale cress	extracellular, plasma membrane	28.44	18.69
VIT_03s0038g01850.t01	Wine grape	extracellular	33.65	18.21
CDY15914	Canola	extracellular, golgi, vacuole	29.38	17.92
Bra030319.1-P	Field mustard	extracellular	29.38	17.42
VIT_03s0038g01830.t01	Wine grape	extracellular, plasma membrane, vacuole	41.23	17.37
CDY41945	Canola	extracellular	18.96	17.02
VIT_03s0038g01860.t01	Wine grape	extracellular, plasma membrane	31.28	16.92
CDX99616	Canola	extracellular, golgi, vacuole	27.96	16.91
AT4G38770.1	Thale cress	extracellular, plasma membrane, vacuole	35.07	16.52
Bra011893.1-P	Field mustard	extracellular, vacuole	18.48	15.79
CDY12101	Canola	extracellular, plasma membrane, vacuole	33.18	15.73
Bra010727.1-P	Field mustard	extracellular, plasma membrane, vacuole	33.18	15.15
PGSC0003DMT400004126	Potato	extracellular, plasma membrane, vacuole	38.86	13.99

Protein Annotations

EnsemblPlants:TraesCS2A01G062000.1	EnsemblPlantsGene:TraesCS2A01G062000	PANTHER:PTHR33935	PANTHER:PTHR33935:SF4	PFAM:PF01190	SEG:seg
SignalP:SignalP-noTM	TMHMM:TMhelix	MapMan:35.2	:	:	:

Description

No Description!

Coordinates

chr2A:-:27632442..27633077

Molecular Weight (calculated)

21747.9 Da

IEP (calculated)

7.587

GRAVY (calculated)

-0.303

Length

211 amino acids

Sequence
(BLAST)

001: MATPRALALC VLLAMAVANT EAASVVVGLA KCADCTRKNM QTEEAFKAVQ VAIKCKNSAG EYESKAVGGL DGTGAFSVPL AANLHGADCV AQLHSAVSNA
101: PCPGQEPSKI VPVSEGTTYG VVAGENAATP SAASPECASM TLCGPIKKHI IEHFHHKKHV PPKPEPKPQP HPDYGPVPKP EPKPQPHPDY HPVPPTPTYG
201: GGGGGGYHGH H

Best Arabidopsis Sequence Match ( AT4G38770.1 )
(BLAST)

001: MRILPEPRGS VPCLLLLVSV LLSATLSLAR VVEVVGYAES KIKTPHAFSG LRVTIDCKVN KGHFVTKGSG NIDDKGKFGL NIPHDIVSDN GALKEECYAQ
101: LHSAAGTPCP AHDGLESTKI VFLSKSGDKH ILGLKQNLKF SPEICVSKFF WPMPKLPPFK GFDHPFPLPP PLELPPFLKK PCPPKYSPPV EVPPPVPVYE
201: PPPKKEIPPP VPVYDPPPKK EVPPPVPVYK PPPKVELPPP IPKKPCPPKP PKIEHPPPVP VYKPPPKIEK PPPVPVYKPP PKIEHPPPVP VHKLPKKPCP
301: PKKVDPPPVP VHKPPTKKPC PPKKVDPPPV PVHKPPPKIV IPPPKIEHPP PVPVYKPPPK IEHPPIYIPP IVKKPCPPPV PIYKPPVVIP KKPCPPPVPV
401: YKPPVVVIPK KPCPPLPQLP PLPKFPPLPP KYIHHPKFGK WPPLPPHP

Arabidopsis Description

PRP4Proline-rich protein 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9T0I5]
SUBAcon: [plasma membrane,extracellular,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.