Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- extracellular 7
- golgi 4
- plasma membrane 4
- endoplasmic reticulum 4
- vacuole 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6D01G092200.1 | Wheat | extracellular | 96.69 | 90.69 |
| Zm00001d030305_P001 | Maize | extracellular | 64.34 | 69.17 |
| EER94343 | Sorghum | extracellular | 63.97 | 65.41 |
| Os10t0148100-01 | Rice | extracellular | 56.99 | 57.2 |
| TraesCS4A01G068900.1 | Wheat | extracellular, golgi, vacuole | 55.88 | 54.09 |
| TraesCS2A01G062700.1 | Wheat | extracellular | 39.71 | 52.17 |
| TraesCS2A01G061900.1 | Wheat | extracellular | 40.07 | 51.66 |
| TraesCS2A01G062100.1 | Wheat | extracellular | 40.07 | 51.66 |
| HORVU6Hr1G018670.1 | Barley | endoplasmic reticulum | 91.91 | 51.65 |
| TraesCS2A01G061800.1 | Wheat | extracellular | 39.71 | 51.43 |
| TraesCS2A01G062900.1 | Wheat | extracellular | 39.34 | 50.95 |
| TraesCS2A01G063000.1 | Wheat | extracellular | 40.44 | 50.93 |
| TraesCS2A01G062800.1 | Wheat | extracellular | 38.97 | 50.48 |
| TraesCS2A01G062200.1 | Wheat | extracellular | 38.97 | 50.24 |
| TraesCS2A01G062600.1 | Wheat | extracellular | 39.34 | 50.0 |
| TraesCS2A01G062400.1 | Wheat | endoplasmic reticulum, plasma membrane, vacuole | 31.62 | 49.71 |
| TraesCS2A01G062000.1 | Wheat | extracellular | 37.13 | 47.87 |
| TraesCS2A01G063100.1 | Wheat | extracellular | 36.76 | 47.85 |
| TraesCS4A01G068700.1 | Wheat | extracellular | 33.09 | 38.14 |
| KRH29118 | Soybean | nucleus | 18.75 | 32.28 |
| GSMUA_AchrUn_... | Banana | extracellular | 31.99 | 32.22 |
| Solyc10g054900.1.1 | Tomato | extracellular | 24.63 | 29.13 |
| PGSC0003DMT400011345 | Potato | extracellular | 23.16 | 28.64 |
| KRH60720 | Soybean | extracellular | 27.94 | 25.5 |
| GSMUA_Achr5P11390_001 | Banana | extracellular, golgi | 34.56 | 25.47 |
| PGSC0003DMT400003134 | Potato | cytosol | 23.16 | 25.4 |
| VIT_03s0038g01850.t01 | Wine grape | extracellular | 31.62 | 22.05 |
| VIT_03s0038g01860.t01 | Wine grape | extracellular, plasma membrane | 30.51 | 21.28 |
| CDY66796 | Canola | endoplasmic reticulum, extracellular, vacuole | 25.0 | 20.54 |
| TraesCS3A01G524900.1 | Wheat | extracellular, plasma membrane | 37.5 | 20.0 |
| AT2G21140.1 | Thale cress | extracellular, plasma membrane | 23.53 | 19.94 |
| CDY15914 | Canola | extracellular, golgi, vacuole | 25.0 | 19.65 |
| CDX99616 | Canola | extracellular, golgi, vacuole | 24.63 | 19.2 |
| Bra030319.1-P | Field mustard | extracellular | 24.63 | 18.82 |
| VIT_03s0038g01830.t01 | Wine grape | extracellular, plasma membrane, vacuole | 34.56 | 18.76 |
| CDY41945 | Canola | extracellular | 16.18 | 18.72 |
| CDY12101 | Canola | extracellular, plasma membrane, vacuole | 28.68 | 17.53 |
| Bra010727.1-P | Field mustard | extracellular, plasma membrane, vacuole | 29.04 | 17.1 |
| Bra011893.1-P | Field mustard | extracellular, vacuole | 15.44 | 17.0 |
| AT4G38770.1 | Thale cress | extracellular, plasma membrane, vacuole | 27.94 | 16.96 |
| PGSC0003DMT400004126 | Potato | extracellular, plasma membrane, vacuole | 30.88 | 14.33 |
Protein Annotations
| EnsemblPlants:TraesCS6A01G103600.1 | EnsemblPlantsGene:TraesCS6A01G103600 | PANTHER:PTHR33935 | PANTHER:PTHR33935:SF5 | PFAM:PF01190 | SEG:seg |
| SignalP:SignalP-noTM | TMHMM:TMhelix | MapMan:35.2 | : | : | : |
Description
No Description!
Coordinates
chr6A:-:72872143..72873692
Molecular Weight (calculated)
29479.9 Da
IEP (calculated)
9.230
GRAVY (calculated)
-0.273
Length
272 amino acids
Sequence
(BLAST)
(BLAST)
001: MGALPRGLLV LGVCAVLVAA VLADASPASS MVVGLAKCAD CTRKNMKAEA AFTGLQVAVK CKNAHGEYET KAVGAVDKSG AFGVPLGADL LREDGELKQD
101: CFAQLHSAPD HPCPGQEPSM IVRQSANGAE KNGFVAVPGE VHYSSQECAS AFLCHFFHKK HLFHKKPALV VPHLNKKAIV IPHIHKKPKP VPVPEYKPPT
201: PTPVYTHPTP VPEHKPPTPV YTHPTLIYHP PADQKMAQDP ETDPQLFKKL LPFIKKNPFF KKFPPAKEDT KP
101: CFAQLHSAPD HPCPGQEPSM IVRQSANGAE KNGFVAVPGE VHYSSQECAS AFLCHFFHKK HLFHKKPALV VPHLNKKAIV IPHIHKKPKP VPVPEYKPPT
201: PTPVYTHPTP VPEHKPPTPV YTHPTLIYHP PADQKMAQDP ETDPQLFKKL LPFIKKNPFF KKFPPAKEDT KP
001: MRILPKSGGG ALCLLFVFAL CSVAHSLSCD VKVVGDVEVI GYSEISKIKI PNAFSGLRVT IECKAADSKG HFVTRGSGEV DETGKFHLNI PHDIVGDDGT
101: LKEACYAHLQ SAFGNPCPAH DGLEASKIVF LSKSGQNHVL GLKKSLKFSP EVCISKFFWH MPKFPLPPPL NLPPLTFPKI KKPCPPIYKP PVVIPKKPCP
201: PKIAHKPIYK PPVPIYKPPV PIYKPPVVIP KKPCPPKIHK PIYKPPVPIY KPPVVIPKKT FPPLHKPIYK HPVPIYKPIF KPPVVVIPKK PCPPLPKFPH
301: FPPKYIPHPK FGKWPPFPSH P
101: LKEACYAHLQ SAFGNPCPAH DGLEASKIVF LSKSGQNHVL GLKKSLKFSP EVCISKFFWH MPKFPLPPPL NLPPLTFPKI KKPCPPIYKP PVVIPKKPCP
201: PKIAHKPIYK PPVPIYKPPV PIYKPPVVIP KKPCPPKIHK PIYKPPVPIY KPPVVIPKKT FPPLHKPIYK HPVPIYKPIF KPPVVVIPKK PCPPLPKFPH
301: FPPKYIPHPK FGKWPPFPSH P
Arabidopsis Description
PRP2Proline-rich protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SKP9]
SUBAcon: [extracellular,plasma membrane]
SUBAcon: [extracellular,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.