Factsheet for TraesCS2A01G062200.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 7
golgi 4
plasma membrane 4
endoplasmic reticulum 4
vacuole 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2A01G061900.1	Wheat	extracellular	92.42	92.42
TraesCS2A01G061800.1	Wheat	extracellular	91.47	91.9
TraesCS2A01G062100.1	Wheat	extracellular	91.47	91.47
TraesCS2A01G062700.1	Wheat	extracellular	89.57	91.3
TraesCS2A01G062000.1	Wheat	extracellular	88.63	88.63
TraesCS2A01G062900.1	Wheat	extracellular	88.15	88.57
TraesCS2A01G063100.1	Wheat	extracellular	87.68	88.52
TraesCS2A01G062800.1	Wheat	extracellular	87.2	87.62
TraesCS2A01G062600.1	Wheat	extracellular	88.63	87.38
HORVU2Hr1G011490.1	Barley	extracellular, plasma membrane	91.0	86.88
TraesCS2A01G063000.1	Wheat	extracellular	88.15	86.11
TraesCS2A01G062400.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	58.77	71.68
HORVU2Hr1G011430.8	Barley	extracellular	91.0	65.31
Os10t0150300-01	Rice	extracellular	57.82	62.24
Os10t0150400-01	Rice	extracellular	65.4	61.61
Os10t0150800-01	Rice	extracellular	65.88	60.7
Os10t0150700-01	Rice	extracellular	65.88	60.7
Os10t0150600-01	Rice	extracellular	63.98	58.95
Zm00001d030314_P001	Maize	extracellular	59.72	57.27
Os07t0484900-01	Rice	cytosol	27.49	54.21
EER91738	Sorghum	mitochondrion	59.24	50.81
TraesCS4A01G068700.1	Wheat	extracellular	43.6	38.98
TraesCS6A01G103600.1	Wheat	extracellular	50.24	38.97
EER91737	Sorghum	extracellular	59.24	37.65
TraesCS4A01G068900.1	Wheat	extracellular, golgi, vacuole	48.82	36.65
KRH29118	Soybean	nucleus	25.59	34.18
GSMUA_AchrUn_...	Banana	extracellular	39.81	31.11
Zm00001d030316_P001	Maize	extracellular	68.25	29.94
PGSC0003DMT400011345	Potato	extracellular	28.44	27.27
EER94340	Sorghum	extracellular	66.82	26.91
Solyc10g054900.1.1	Tomato	extracellular	28.91	26.52
PGSC0003DMT400003134	Potato	cytosol	29.38	25.0
GSMUA_Achr5P11390_001	Banana	extracellular, golgi	43.6	24.93
KRH60720	Soybean	extracellular	32.23	22.82
TraesCS3A01G524900.1	Wheat	extracellular, plasma membrane	51.18	21.18
CDY66796	Canola	endoplasmic reticulum, extracellular, vacuole	33.18	21.15
VIT_03s0038g01850.t01	Wine grape	extracellular	36.49	19.74
AT2G21140.1	Thale cress	extracellular, plasma membrane	29.86	19.63
CDY41945	Canola	extracellular	21.33	19.15
CDY15914	Canola	extracellular, golgi, vacuole	31.28	19.08
VIT_03s0038g01860.t01	Wine grape	extracellular, plasma membrane	34.6	18.72
CDX99616	Canola	extracellular, golgi, vacuole	30.81	18.62
Bra030319.1-P	Field mustard	extracellular	31.28	18.54
VIT_03s0038g01830.t01	Wine grape	extracellular, plasma membrane, vacuole	43.13	18.16
Bra011893.1-P	Field mustard	extracellular, vacuole	20.85	17.81
AT4G38770.1	Thale cress	extracellular, plasma membrane, vacuole	37.44	17.63
CDY12101	Canola	extracellular, plasma membrane, vacuole	35.55	16.85
Bra010727.1-P	Field mustard	extracellular, plasma membrane, vacuole	36.49	16.67
PGSC0003DMT400004126	Potato	extracellular, plasma membrane, vacuole	41.71	15.02

Protein Annotations

EnsemblPlants:TraesCS2A01G062200.1	EnsemblPlantsGene:TraesCS2A01G062200	PANTHER:PTHR33935	PANTHER:PTHR33935:SF4	PFAM:PF01190	SEG:seg
SignalP:SignalP-noTM	TMHMM:TMhelix	MapMan:35.2	:	:	:

Description

No Description!

Coordinates

chr2A:+:27642899..27643874

Molecular Weight (calculated)

21649.8 Da

IEP (calculated)

7.597

GRAVY (calculated)

-0.246

Length

211 amino acids

Sequence
(BLAST)

001: MAASRALVLG VLLAITVANA EAASVVVGLA KCADCTRKNI KAEEAFKGLQ VAIKCKNNAG DYESKAVGAL DGTGAFSVPL AADLHGADCV AQLHSAASNA
101: PCPGQEPSKI VPVSEGTTFG IVAGNNIATP SAAPSPECAS MTLCGPIKKH IIEHFHHKKP VPPKPEPKPE PHPDYGPVPK PEPKPQPHPD YHPVPPTPTY
201: GGGGGGYHGH H

Best Arabidopsis Sequence Match ( AT4G38770.1 )
(BLAST)

001: MRILPEPRGS VPCLLLLVSV LLSATLSLAR VVEVVGYAES KIKTPHAFSG LRVTIDCKVN KGHFVTKGSG NIDDKGKFGL NIPHDIVSDN GALKEECYAQ
101: LHSAAGTPCP AHDGLESTKI VFLSKSGDKH ILGLKQNLKF SPEICVSKFF WPMPKLPPFK GFDHPFPLPP PLELPPFLKK PCPPKYSPPV EVPPPVPVYE
201: PPPKKEIPPP VPVYDPPPKK EVPPPVPVYK PPPKVELPPP IPKKPCPPKP PKIEHPPPVP VYKPPPKIEK PPPVPVYKPP PKIEHPPPVP VHKLPKKPCP
301: PKKVDPPPVP VHKPPTKKPC PPKKVDPPPV PVHKPPPKIV IPPPKIEHPP PVPVYKPPPK IEHPPIYIPP IVKKPCPPPV PIYKPPVVIP KKPCPPPVPV
401: YKPPVVVIPK KPCPPLPQLP PLPKFPPLPP KYIHHPKFGK WPPLPPHP

Arabidopsis Description

PRP4Proline-rich protein 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9T0I5]
SUBAcon: [extracellular,plasma membrane,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.