Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- extracellular 6
- endoplasmic reticulum 4
- vacuole 4
- plasma membrane 5
- golgi 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4B01G225800.1 | Wheat | extracellular | 96.61 | 97.02 |
| TraesCS4D01G226500.1 | Wheat | extracellular | 95.34 | 95.74 |
| HORVU4Hr1G063490.1 | Barley | golgi, mitochondrion, plasma membrane, plastid | 94.07 | 84.09 |
| Os03t0245300-01 | Rice | extracellular | 69.07 | 64.94 |
| Zm00001d047933_P001 | Maize | endoplasmic reticulum, extracellular, plasma membrane | 64.41 | 58.02 |
| EER92564 | Sorghum | extracellular | 61.44 | 56.64 |
| TraesCS2A01G062700.1 | Wheat | extracellular | 38.56 | 43.96 |
| TraesCS2A01G062900.1 | Wheat | extracellular | 38.98 | 43.81 |
| TraesCS2A01G062200.1 | Wheat | extracellular | 38.98 | 43.6 |
| TraesCS2A01G061800.1 | Wheat | extracellular | 38.56 | 43.33 |
| TraesCS2A01G062800.1 | Wheat | extracellular | 38.56 | 43.33 |
| TraesCS2A01G062100.1 | Wheat | extracellular | 38.56 | 43.13 |
| TraesCS2A01G061900.1 | Wheat | extracellular | 37.71 | 42.18 |
| TraesCS2A01G063000.1 | Wheat | extracellular | 38.56 | 42.13 |
| TraesCS2A01G062600.1 | Wheat | extracellular | 37.71 | 41.59 |
| TraesCS2A01G062000.1 | Wheat | extracellular | 36.86 | 41.23 |
| TraesCS2A01G063100.1 | Wheat | extracellular | 35.17 | 39.71 |
| TraesCS2A01G062400.1 | Wheat | endoplasmic reticulum, plasma membrane, vacuole | 28.39 | 38.73 |
| TraesCS6A01G103600.1 | Wheat | extracellular | 38.14 | 33.09 |
| TraesCS4A01G068900.1 | Wheat | extracellular, golgi, vacuole | 36.02 | 30.25 |
| PGSC0003DMT400011345 | Potato | extracellular | 25.85 | 27.73 |
| GSMUA_AchrUn_... | Banana | extracellular | 30.51 | 26.67 |
| Solyc10g054900.1.1 | Tomato | extracellular | 25.42 | 26.09 |
| KRH29118 | Soybean | nucleus | 16.1 | 24.05 |
| GSMUA_Achr5P11390_001 | Banana | extracellular, golgi | 37.29 | 23.85 |
| PGSC0003DMT400003134 | Potato | cytosol | 24.15 | 22.98 |
| KRH60720 | Soybean | extracellular | 27.97 | 22.15 |
| CDY66796 | Canola | endoplasmic reticulum, extracellular, vacuole | 25.42 | 18.13 |
| VIT_03s0038g01850.t01 | Wine grape | extracellular | 29.66 | 17.95 |
| AT2G21140.1 | Thale cress | extracellular, plasma membrane | 24.15 | 17.76 |
| VIT_03s0038g01860.t01 | Wine grape | extracellular, plasma membrane | 29.24 | 17.69 |
| CDY15914 | Canola | extracellular, golgi, vacuole | 25.85 | 17.63 |
| CDX99616 | Canola | extracellular, golgi, vacuole | 25.42 | 17.19 |
| CDY41945 | Canola | extracellular | 16.95 | 17.02 |
| Bra030319.1-P | Field mustard | extracellular | 25.0 | 16.57 |
| Bra011893.1-P | Field mustard | extracellular, vacuole | 16.95 | 16.19 |
| VIT_03s0038g01830.t01 | Wine grape | extracellular, plasma membrane, vacuole | 33.05 | 15.57 |
| TraesCS3A01G524900.1 | Wheat | extracellular, plasma membrane | 33.47 | 15.49 |
| CDY12101 | Canola | extracellular, plasma membrane, vacuole | 28.39 | 15.06 |
| AT4G38770.1 | Thale cress | extracellular, plasma membrane, vacuole | 28.39 | 14.96 |
| Bra010727.1-P | Field mustard | extracellular, plasma membrane, vacuole | 29.24 | 14.94 |
| PGSC0003DMT400004126 | Potato | extracellular, plasma membrane, vacuole | 32.63 | 13.14 |
Protein Annotations
| EnsemblPlants:TraesCS4A01G068700.1 | EnsemblPlantsGene:TraesCS4A01G068700 | PANTHER:PTHR33935 | PANTHER:PTHR33935:SF1 | PFAM:PF01190 | SEG:seg |
| SignalP:SignalP-noTM | TMHMM:TMhelix | MapMan:35.2 | : | : | : |
Description
No Description!
Coordinates
chr4A:+:66935086..66935876
Molecular Weight (calculated)
24725.6 Da
IEP (calculated)
7.720
GRAVY (calculated)
-0.460
Length
236 amino acids
Sequence
(BLAST)
(BLAST)
001: MGSRLVLFGA LALLLAGSFG AAQAAPAVVV GSVKCLDCSP DDVSAEDALK GLQVAIKCRS GAGETYETQT VGQLDDKGAF SVPLQAGLLR EDGELDRDCF
101: AQLHSAPDTP CDGPAPPRIA PAKSTTQGVA DAANTYLAVA EDTVFSPVAC ACKKKKKHFM VGPPPPPPPR PEPSYGTPTP TPTPTPTPSY GPPSTPKPPA
201: PEDDPKPFFH KHPKMKKMMH KKKPCPPLGE EDKPKN
101: AQLHSAPDTP CDGPAPPRIA PAKSTTQGVA DAANTYLAVA EDTVFSPVAC ACKKKKKHFM VGPPPPPPPR PEPSYGTPTP TPTPTPTPSY GPPSTPKPPA
201: PEDDPKPFFH KHPKMKKMMH KKKPCPPLGE EDKPKN
001: MRILPEPRGS VPCLLLLVSV LLSATLSLAR VVEVVGYAES KIKTPHAFSG LRVTIDCKVN KGHFVTKGSG NIDDKGKFGL NIPHDIVSDN GALKEECYAQ
101: LHSAAGTPCP AHDGLESTKI VFLSKSGDKH ILGLKQNLKF SPEICVSKFF WPMPKLPPFK GFDHPFPLPP PLELPPFLKK PCPPKYSPPV EVPPPVPVYE
201: PPPKKEIPPP VPVYDPPPKK EVPPPVPVYK PPPKVELPPP IPKKPCPPKP PKIEHPPPVP VYKPPPKIEK PPPVPVYKPP PKIEHPPPVP VHKLPKKPCP
301: PKKVDPPPVP VHKPPTKKPC PPKKVDPPPV PVHKPPPKIV IPPPKIEHPP PVPVYKPPPK IEHPPIYIPP IVKKPCPPPV PIYKPPVVIP KKPCPPPVPV
401: YKPPVVVIPK KPCPPLPQLP PLPKFPPLPP KYIHHPKFGK WPPLPPHP
101: LHSAAGTPCP AHDGLESTKI VFLSKSGDKH ILGLKQNLKF SPEICVSKFF WPMPKLPPFK GFDHPFPLPP PLELPPFLKK PCPPKYSPPV EVPPPVPVYE
201: PPPKKEIPPP VPVYDPPPKK EVPPPVPVYK PPPKVELPPP IPKKPCPPKP PKIEHPPPVP VYKPPPKIEK PPPVPVYKPP PKIEHPPPVP VHKLPKKPCP
301: PKKVDPPPVP VHKPPTKKPC PPKKVDPPPV PVHKPPPKIV IPPPKIEHPP PVPVYKPPPK IEHPPIYIPP IVKKPCPPPV PIYKPPVVIP KKPCPPPVPV
401: YKPPVVVIPK KPCPPLPQLP PLPKFPPLPP KYIHHPKFGK WPPLPPHP
Arabidopsis Description
PRP4Proline-rich protein 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9T0I5]
SUBAcon: [plasma membrane,extracellular,vacuole]
SUBAcon: [plasma membrane,extracellular,vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.