Factsheet for HORVU4Hr1G063490.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plasma membrane, golgi, plastid

Predictor Summary:

plastid 1
mitochondrion 2
golgi 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi, mitochondrion, plasma membrane, plastid
Any Predictor:	golgi, mitochondrion, plastid
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	golgi
TargetP:	mitochondrion
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4B01G225800.1	Wheat	extracellular	84.47	94.89
TraesCS4A01G068700.1	Wheat	extracellular	84.09	94.07
TraesCS4D01G226500.1	Wheat	extracellular	83.71	94.04
Os03t0245300-01	Rice	extracellular	62.12	65.34
Zm00001d047933_P001	Maize	endoplasmic reticulum, extracellular, plasma membrane	56.82	57.25
EER92564	Sorghum	extracellular	54.92	56.64
HORVU2Hr1G011490.1	Barley	extracellular, plasma membrane	35.23	42.08
HORVU2Hr1G011530.1	Barley	plastid	17.42	38.66
HORVU2Hr1G011470.1	Barley	mitochondrion	28.03	32.6
HORVU4Hr1G063610.1	Barley	endoplasmic reticulum, extracellular	33.33	31.32
HORVU2Hr1G011430.8	Barley	extracellular	34.85	31.29
PGSC0003DMT400011345	Potato	extracellular	23.11	27.73
HORVU2Hr1G011420.1	Barley	cytosol	38.26	27.67
GSMUA_AchrUn_...	Banana	extracellular	26.89	26.3
Solyc10g054900.1.1	Tomato	extracellular	22.73	26.09
GSMUA_Achr5P11390_001	Banana	extracellular, golgi	33.71	24.12
KRH29118	Soybean	nucleus	14.02	23.42
PGSC0003DMT400003134	Potato	cytosol	21.21	22.58
KRH60720	Soybean	extracellular	24.62	21.81
HORVU6Hr1G018670.1	Barley	endoplasmic reticulum	35.98	19.63
HORVU3Hr1G114320.1	Barley	extracellular, plasma membrane	31.06	19.34
VIT_03s0038g01850.t01	Wine grape	extracellular	26.89	18.21
CDY66796	Canola	endoplasmic reticulum, extracellular, vacuole	22.73	18.13
AT2G21140.1	Thale cress	extracellular, plasma membrane	21.97	18.07
VIT_03s0038g01860.t01	Wine grape	extracellular, plasma membrane	26.52	17.95
CDY15914	Canola	extracellular, golgi, vacuole	23.48	17.92
CDX99616	Canola	extracellular, golgi, vacuole	23.11	17.48
CDY41945	Canola	extracellular	15.15	17.02
Bra030319.1-P	Field mustard	extracellular	22.73	16.85
Bra011893.1-P	Field mustard	extracellular, vacuole	15.15	16.19
VIT_03s0038g01830.t01	Wine grape	extracellular, plasma membrane, vacuole	29.55	15.57
CDY12101	Canola	extracellular, plasma membrane, vacuole	25.76	15.28
Bra010727.1-P	Field mustard	extracellular, plasma membrane, vacuole	26.52	15.15
AT4G38770.1	Thale cress	extracellular, plasma membrane, vacuole	25.38	14.96
PGSC0003DMT400004126	Potato	extracellular, plasma membrane, vacuole	29.17	13.14

Protein Annotations

EnsemblPlants:HORVU4Hr1G063490.1	EnsemblPlantsGene:HORVU4Hr1G063490	PANTHER:PTHR33935	PANTHER:PTHR33935:SF1	PFAM:PF01190	SEG:seg
SignalP:SignalP-noTM	TMHMM:TMhelix	UniParc:UPI000B4607A6	UniProt:A0A287PCB6	MapMan:35.2	:

Description

No Description!

Coordinates

chrchr4H:+:531524863..531526256

Molecular Weight (calculated)

27695.2 Da

IEP (calculated)

8.554

GRAVY (calculated)

-0.422

Length

264 amino acids

Sequence
(BLAST)

001: SILTTRQCSF YCRGSRPAAA AAAGSSMMGS RLALFGVLAL LLAVSFGAAE AAPAVVVGSV KCLDCSPDDV SAEDALKGLQ VAIKCRSGAG ETYETQTVGR
101: LDDNGAFSIP LQAGLLREDG RLDRDCFAQL HSAPGTPCDG PAPPRIAPAK PSTQGVADAN TYLAVAEDTV FSPVACACKK KKKNFMVGPP PPPPPRPEPS
201: YGPPTPTPTP TPTPSYGPPS TPKPPAPEDD PKPFFHKHPK MKKMMHKKKP CPPLGEEDKP ERKN

Best Arabidopsis Sequence Match ( AT4G38770.1 )
(BLAST)

001: MRILPEPRGS VPCLLLLVSV LLSATLSLAR VVEVVGYAES KIKTPHAFSG LRVTIDCKVN KGHFVTKGSG NIDDKGKFGL NIPHDIVSDN GALKEECYAQ
101: LHSAAGTPCP AHDGLESTKI VFLSKSGDKH ILGLKQNLKF SPEICVSKFF WPMPKLPPFK GFDHPFPLPP PLELPPFLKK PCPPKYSPPV EVPPPVPVYE
201: PPPKKEIPPP VPVYDPPPKK EVPPPVPVYK PPPKVELPPP IPKKPCPPKP PKIEHPPPVP VYKPPPKIEK PPPVPVYKPP PKIEHPPPVP VHKLPKKPCP
301: PKKVDPPPVP VHKPPTKKPC PPKKVDPPPV PVHKPPPKIV IPPPKIEHPP PVPVYKPPPK IEHPPIYIPP IVKKPCPPPV PIYKPPVVIP KKPCPPPVPV
401: YKPPVVVIPK KPCPPLPQLP PLPKFPPLPP KYIHHPKFGK WPPLPPHP

Arabidopsis Description

PRP4Proline-rich protein 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9T0I5]
SUBAcon: [plasma membrane,extracellular,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.