Factsheet for VIT_03s0038g01830.t01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, extracellular, vacuole

Predictor Summary:

extracellular 6
endoplasmic reticulum 5
vacuole 6
plasma membrane 6
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, plasma membrane, vacuole
Any Predictor:	secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_03s0038g01850.t01	Wine grape	extracellular	50.5	64.87
VIT_03s0038g01860.t01	Wine grape	extracellular, plasma membrane	49.9	64.1
KRH29118	Soybean	nucleus	19.96	63.29
KRH60720	Soybean	extracellular	34.73	58.39
PGSC0003DMT400011345	Potato	extracellular	24.95	56.82
Solyc10g054900.1.1	Tomato	extracellular	25.75	56.09
CDY66796	Canola	endoplasmic reticulum, extracellular, vacuole	34.53	52.27
Bra011893.1-P	Field mustard	extracellular, vacuole	25.75	52.23
AT4G38770.1	Thale cress	extracellular, plasma membrane, vacuole	45.91	51.34
CDY41945	Canola	extracellular	23.95	51.06
PGSC0003DMT400003134	Potato	cytosol	25.15	50.81
AT2G21140.1	Thale cress	extracellular, plasma membrane	32.53	50.78
CDY12101	Canola	extracellular, plasma membrane, vacuole	44.71	50.34
CDY15914	Canola	extracellular, golgi, vacuole	34.73	50.29
Bra030319.1-P	Field mustard	extracellular	35.73	50.28
CDX99616	Canola	extracellular, golgi, vacuole	34.53	49.57
PGSC0003DMT400004126	Potato	extracellular, plasma membrane, vacuole	57.88	49.49
Bra010727.1-P	Field mustard	extracellular, plasma membrane, vacuole	45.11	48.92
TraesCS2B01G075400.1	Wheat	extracellular	18.56	44.93
TraesCS2D01G061400.1	Wheat	extracellular	18.76	44.76
TraesCSU01G146800.1	Wheat	extracellular	18.76	44.76
TraesCSU01G242700.1	Wheat	extracellular	18.76	44.76
TraesCSU01G243700.2	Wheat	extracellular	18.76	44.76
TraesCS2B01G075700.1	Wheat	extracellular	18.76	44.55
TraesCS2A01G062700.1	Wheat	extracellular	18.36	44.44
TraesCS2A01G061800.1	Wheat	extracellular	18.56	44.29
TraesCS2A01G062900.1	Wheat	extracellular	18.56	44.29
TraesCS2B01G075600.1	Wheat	extracellular	18.56	44.29
TraesCSU01G201000.1	Wheat	extracellular	18.56	44.29
TraesCSU01G207300.1	Wheat	extracellular	18.56	44.29
TraesCSU01G242600.1	Wheat	extracellular	18.56	44.29
TraesCS2B01G075500.1	Wheat	extracellular	14.57	43.98
TraesCS2A01G062800.1	Wheat	extracellular	18.36	43.81
GSMUA_AchrUn_...	Banana	extracellular	23.55	43.7
TraesCS2A01G062100.1	Wheat	extracellular	18.16	43.13
TraesCS2A01G062200.1	Wheat	extracellular	18.16	43.13
TraesCS2D01G061000.1	Wheat	extracellular	17.96	42.65
TraesCS2D01G061300.1	Wheat	extracellular	17.96	42.65
TraesCS2A01G063000.1	Wheat	extracellular	18.36	42.59
TraesCS2A01G063100.1	Wheat	extracellular	17.76	42.58
TraesCS2B01G075800.1	Wheat	extracellular	17.56	42.31
TraesCSU01G155600.1	Wheat	extracellular	13.57	41.72
TraesCS2A01G061900.1	Wheat	extracellular	17.56	41.71
TraesCS2D01G061100.1	Wheat	extracellular	17.56	41.71
Os10t0150700-01	Rice	extracellular	18.96	41.48
TraesCS2A01G062000.1	Wheat	extracellular	17.37	41.23
TraesCSU01G024700.1	Wheat	extracellular	13.37	41.1
Os10t0150400-01	Rice	extracellular	18.36	41.07
Os10t0150600-01	Rice	extracellular	18.76	41.05
TraesCSU01G024800.1	Wheat	extracellular	17.37	41.04
TraesCS2B01G075300.1	Wheat	extracellular	17.17	40.95
Zm00001d030314_P001	Maize	extracellular	17.96	40.91
TraesCSU01G146900.1	Wheat	extracellular	17.17	40.76
TraesCSU01G208500.1	Wheat	extracellular	17.17	40.76
TraesCS2A01G062600.1	Wheat	extracellular	17.37	40.65
TraesCSU01G264800.1	Wheat	extracellular	16.97	40.28
Os10t0150800-01	Rice	extracellular	18.36	40.17
GSMUA_Achr5P11390_001	Banana	extracellular, golgi	29.34	39.84
HORVU2Hr1G011490.1	Barley	extracellular, plasma membrane	17.56	39.82
Os10t0150300-01	Rice	extracellular	14.97	38.27
TraesCS2A01G062400.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	12.97	37.57
Os10t0148700-01	Rice	extracellular	22.55	37.54
EER91738	Sorghum	mitochondrion	18.16	36.99
TraesCS2D01G061200.1	Wheat	endoplasmic reticulum, extracellular, plasma membrane	12.77	36.16
TraesCSU01G024500.1	Wheat	endoplasmic reticulum, extracellular, plasma membrane	12.77	36.16
TraesCSU01G225700.1	Wheat	endoplasmic reticulum, extracellular, plasma membrane	12.77	36.16
Zm00001d030305_P001	Maize	extracellular	17.76	35.18
Os10t0149100-00	Rice	cytosol, nucleus	10.58	35.1
Os10t0149400-00	Rice	cytosol	14.17	34.63
EER94343	Sorghum	extracellular	18.36	34.59
TraesCS6A01G103600.1	Wheat	extracellular	18.76	34.56
Zm00001d047934_P001	Maize	extracellular	18.96	34.55
TraesCS6D01G092200.1	Wheat	extracellular	19.96	34.48
EER92565	Sorghum	extracellular	17.76	34.36
Os03t0245300-01	Rice	extracellular	17.17	34.26
TraesCS4B01G225800.1	Wheat	extracellular	15.77	33.62
Os10t0149000-00	Rice	extracellular	14.57	33.33
Os10t0148100-01	Rice	extracellular	17.96	33.21
TraesCS4D01G226500.1	Wheat	extracellular	15.57	33.19
TraesCS4A01G068700.1	Wheat	extracellular	15.57	33.05
Os10t0149200-01	Rice	extracellular	14.77	33.04
Os10t0149800-00	Rice	extracellular	13.57	33.01
Os10t0150000-01	Rice	cytosol, nucleus, plastid	7.58	32.48
Zm00001d028405_P002	Maize	extracellular	18.16	32.27
Os07t0484900-01	Rice	cytosol	6.79	31.78
HORVU2Hr1G011430.8	Barley	extracellular	18.16	30.95
TraesCS4B01G226000.1	Wheat	extracellular, golgi, vacuole	15.77	30.27
TraesCS4D01G226700.1	Wheat	extracellular, plasma membrane, vacuole	15.97	30.19
HORVU4Hr1G063490.1	Barley	golgi, mitochondrion, plasma membrane, plastid	15.57	29.55
HORVU4Hr1G063610.1	Barley	endoplasmic reticulum, extracellular	16.57	29.54
TraesCS4A01G068900.1	Wheat	extracellular, golgi, vacuole	16.37	29.18
HORVU2Hr1G011530.1	Barley	plastid	6.79	28.57
EER92564	Sorghum	extracellular	14.57	28.52
EER91737	Sorghum	extracellular	18.76	28.31
HORVU2Hr1G011470.1	Barley	mitochondrion	12.77	28.19
Zm00001d047933_P001	Maize	endoplasmic reticulum, extracellular, plasma membrane	14.57	27.86
HORVU3Hr1G114320.1	Barley	extracellular, plasma membrane	22.16	26.18
HORVU2Hr1G011420.1	Barley	cytosol	18.96	26.03
TraesCS3A01G524900.1	Wheat	extracellular, plasma membrane	25.35	24.9
TraesCS3D01G530100.1	Wheat	extracellular, plasma membrane	25.75	24.71
Zm00001d030316_P001	Maize	extracellular	23.15	24.12
TraesCS3B01G592200.1	Wheat	extracellular, plasma membrane	24.55	23.65
EER94340	Sorghum	extracellular	24.35	23.28
HORVU6Hr1G018670.1	Barley	endoplasmic reticulum	22.16	22.93
Os03t0245200-01	Rice	extracellular	9.98	21.1

Protein Annotations

ArrayExpress:VIT_03s0038g01830	EMBL:FN596508	EnsemblPlants:VIT_03s0038g01830.t01	EnsemblPlantsGene:VIT_03s0038g01830	EntrezGene:100245206	EntrezGene:LOC100245206
PANTHER:PTHR23201	PANTHER:PTHR23201:SF16	PFAM:PF01190	ProteinID:CCB60649	ProteinID:CCB60649.1	RefSeq:XP_003631574
RefSeq:XP_003631574.1	SEG:seg	SignalP:SignalP-noTM	TIGR:TC61174	unigene:Vvi.9575	UniParc:UPI00021085FC
UniProt:F6I133	wikigene:100245206	wikigene:LOC100245206	MapMan:35.1	:	:

Description

No Description!

Coordinates

chr3:+:1283253..1285733

Molecular Weight (calculated)

55879.7 Da

IEP (calculated)

10.552

GRAVY (calculated)

-0.327

Length

501 amino acids

Sequence
(BLAST)

001: MQVLPISRGA LLCFWVSLLF SASFCHGSVQ KVEVVGIGEC ADCKQRNIKT SQAFSGLRVT IDCKLANGEF KTRAVGELDE EGKFKVSLPE EIVKDGELKE
101: ECFAQLHSAS ATPCPAHNGL ESSKLILKTK VDGKHTFGPA GKLKFSPATC TSAFLWPYYK HPQLPKVSWP KLPPYSKSHP WYKPMPKIYL PPIKFPPLPP
201: KVYPPFTFPP LPPKVFPPPV PIYKKPLPPP VPVYKKPLPP PVPVYKKPLP PPVPVYKKPL PPPVPIYKKP LPPPVPIYKK PLPPPVPIYK KPLPPPVPIY
301: KKPLPPPVPI YKKPLPPPVP VYKKPLPPPV PVYKKPLPPP VPVYKKPLPP PVPIYKKPLP PPVPIYKKPL PPPVPVYKKP LPPPVPVYKK PLPPPVPVYK
401: KPLPPPVPVY KKPCPPEIPK ILPPPIPIYK KPLPPFVPIY KPIPPISKPL PPFPPIYKKP WPPIPQVPLP KFPPVHKFPP KYFHHPKFGF GSPVPPYSSH
501: P

Best Arabidopsis Sequence Match ( AT4G38770.1 )
(BLAST)

001: MRILPEPRGS VPCLLLLVSV LLSATLSLAR VVEVVGYAES KIKTPHAFSG LRVTIDCKVN KGHFVTKGSG NIDDKGKFGL NIPHDIVSDN GALKEECYAQ
101: LHSAAGTPCP AHDGLESTKI VFLSKSGDKH ILGLKQNLKF SPEICVSKFF WPMPKLPPFK GFDHPFPLPP PLELPPFLKK PCPPKYSPPV EVPPPVPVYE
201: PPPKKEIPPP VPVYDPPPKK EVPPPVPVYK PPPKVELPPP IPKKPCPPKP PKIEHPPPVP VYKPPPKIEK PPPVPVYKPP PKIEHPPPVP VHKLPKKPCP
301: PKKVDPPPVP VHKPPTKKPC PPKKVDPPPV PVHKPPPKIV IPPPKIEHPP PVPVYKPPPK IEHPPIYIPP IVKKPCPPPV PIYKPPVVIP KKPCPPPVPV
401: YKPPVVVIPK KPCPPLPQLP PLPKFPPLPP KYIHHPKFGK WPPLPPHP

Arabidopsis Description

PRP4Proline-rich protein 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9T0I5]
SUBAcon: [plasma membrane,extracellular,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.