Factsheet for TraesCSU01G024700.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 8
endoplasmic reticulum 5
vacuole 5
plasma membrane 5
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCSU01G155600.1	Wheat	extracellular	98.77	98.77
TraesCS2A01G061900.1	Wheat	extracellular	92.64	71.56
TraesCS2A01G062100.1	Wheat	extracellular	90.8	70.14
TraesCSU01G264800.1	Wheat	extracellular	86.5	66.82
TraesCSU01G208500.1	Wheat	extracellular	85.89	66.35
TraesCSU01G146900.1	Wheat	extracellular	85.89	66.35
TraesCSU01G024800.1	Wheat	extracellular	84.05	64.62
TraesCSU01G225700.1	Wheat	endoplasmic reticulum, extracellular, plasma membrane	69.94	64.41
TraesCSU01G024500.1	Wheat	endoplasmic reticulum, extracellular, plasma membrane	69.94	64.41
TraesCSU01G242700.1	Wheat	extracellular	82.21	63.81
TraesCSU01G146800.1	Wheat	extracellular	82.21	63.81
TraesCSU01G201000.1	Wheat	extracellular	82.21	63.81
TraesCSU01G207300.1	Wheat	extracellular	82.21	63.81
TraesCSU01G243700.2	Wheat	extracellular	82.21	63.81
HORVU2Hr1G011490.1	Barley	extracellular, plasma membrane	86.5	63.8
TraesCSU01G242600.1	Wheat	extracellular	81.6	63.33
Os10t0150300-01	Rice	extracellular	61.35	51.02
Os10t0150400-01	Rice	extracellular	68.71	50.0
Os10t0150800-01	Rice	extracellular	68.1	48.47
Os10t0150700-01	Rice	extracellular	68.1	48.47
HORVU2Hr1G011430.8	Barley	extracellular	86.5	47.96
Os10t0150600-01	Rice	extracellular	66.87	47.6
Os07t0484900-01	Rice	cytosol	30.67	46.73
Zm00001d030314_P001	Maize	extracellular	58.9	43.64
EER91738	Sorghum	mitochondrion	62.58	41.46
KRH29118	Soybean	nucleus	31.9	32.91
EER91737	Sorghum	extracellular	57.06	28.01
GSMUA_AchrUn_...	Banana	extracellular	38.65	23.33
PGSC0003DMT400011345	Potato	extracellular	30.67	22.73
Zm00001d030316_P001	Maize	extracellular	64.42	21.83
Solyc10g054900.1.1	Tomato	extracellular	30.67	21.74
PGSC0003DMT400003134	Potato	cytosol	31.29	20.56
EER94340	Sorghum	extracellular	63.19	19.66
GSMUA_Achr5P11390_001	Banana	extracellular, golgi	41.72	18.43
KRH60720	Soybean	extracellular	33.13	18.12
CDY66796	Canola	endoplasmic reticulum, extracellular, vacuole	31.9	15.71
VIT_03s0038g01850.t01	Wine grape	extracellular	36.81	15.38
AT2G21140.1	Thale cress	extracellular, plasma membrane	28.83	14.64
VIT_03s0038g01860.t01	Wine grape	extracellular, plasma membrane	34.36	14.36
CDY15914	Canola	extracellular, golgi, vacuole	28.83	13.58
VIT_03s0038g01830.t01	Wine grape	extracellular, plasma membrane, vacuole	41.1	13.37
Bra030319.1-P	Field mustard	extracellular	28.83	13.2
CDX99616	Canola	extracellular, golgi, vacuole	26.99	12.61
CDY41945	Canola	extracellular	17.79	12.34
AT4G38770.1	Thale cress	extracellular, plasma membrane, vacuole	31.29	11.38
Bra011893.1-P	Field mustard	extracellular, vacuole	17.18	11.34
Bra010727.1-P	Field mustard	extracellular, plasma membrane, vacuole	30.67	10.82
CDY12101	Canola	extracellular, plasma membrane, vacuole	29.45	10.79
PGSC0003DMT400004126	Potato	extracellular, plasma membrane, vacuole	35.58	9.9

Protein Annotations

EnsemblPlants:TraesCSU01G024700.1	EnsemblPlantsGene:TraesCSU01G024700	PANTHER:PTHR33935	PANTHER:PTHR33935:SF4	PFAM:PF01190	SEG:seg
SignalP:SignalP-noTM	TMHMM:TMhelix	MapMan:35.2	:	:	:

Description

No Description!

Coordinates

chrUn:-:24836315..24837094

Molecular Weight (calculated)

16761.3 Da

IEP (calculated)

7.473

GRAVY (calculated)

0.146

Length

163 amino acids

Sequence
(BLAST)

001: MAAPTRALVL GVLLAIAVAN AEAASVVVGL VKCADCTRKN MKAEEAFKGL QVAVECKNVH GDYESKAVGA LDRTGAFSVP LTADLHGTNC VPQLHSAASN
101: APCPGQEPSK IVPVSEGTTF GIVAGDSIAT PSAASPECTS MTLCGPIKKH IIEHFHHKKP VPP

Best Arabidopsis Sequence Match ( AT4G38770.1 )
(BLAST)

001: MRILPEPRGS VPCLLLLVSV LLSATLSLAR VVEVVGYAES KIKTPHAFSG LRVTIDCKVN KGHFVTKGSG NIDDKGKFGL NIPHDIVSDN GALKEECYAQ
101: LHSAAGTPCP AHDGLESTKI VFLSKSGDKH ILGLKQNLKF SPEICVSKFF WPMPKLPPFK GFDHPFPLPP PLELPPFLKK PCPPKYSPPV EVPPPVPVYE
201: PPPKKEIPPP VPVYDPPPKK EVPPPVPVYK PPPKVELPPP IPKKPCPPKP PKIEHPPPVP VYKPPPKIEK PPPVPVYKPP PKIEHPPPVP VHKLPKKPCP
301: PKKVDPPPVP VHKPPTKKPC PPKKVDPPPV PVHKPPPKIV IPPPKIEHPP PVPVYKPPPK IEHPPIYIPP IVKKPCPPPV PIYKPPVVIP KKPCPPPVPV
401: YKPPVVVIPK KPCPPLPQLP PLPKFPPLPP KYIHHPKFGK WPPLPPHP

Arabidopsis Description

PRP4Proline-rich protein 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9T0I5]
SUBAcon: [plasma membrane,extracellular,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.