Factsheet for TraesCSU01G024500.1

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, extracellular, plasma membrane

Predictor Summary:

extracellular 6
endoplasmic reticulum 6
vacuole 5
plasma membrane 6
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, extracellular, plasma membrane
Any Predictor:	secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCSU01G225700.1	Wheat	endoplasmic reticulum, extracellular, plasma membrane	100.0	100.0
TraesCS2D01G061200.1	Wheat	endoplasmic reticulum, extracellular, plasma membrane	99.44	99.44
TraesCS2A01G062400.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	89.27	91.33
TraesCSU01G155600.1	Wheat	extracellular	64.97	70.55
TraesCSU01G024700.1	Wheat	extracellular	64.41	69.94
HORVU2Hr1G011470.1	Barley	mitochondrion	85.88	66.96
TraesCSU01G024800.1	Wheat	extracellular	70.62	58.96
TraesCSU01G146900.1	Wheat	extracellular	69.49	58.29
TraesCSU01G208500.1	Wheat	extracellular	69.49	58.29
TraesCSU01G207300.1	Wheat	extracellular	67.8	57.14
TraesCSU01G146800.1	Wheat	extracellular	67.8	57.14
TraesCSU01G243700.2	Wheat	extracellular	67.8	57.14
TraesCSU01G242700.1	Wheat	extracellular	67.8	57.14
TraesCSU01G201000.1	Wheat	extracellular	67.8	57.14
TraesCSU01G264800.1	Wheat	extracellular	67.8	56.87
TraesCSU01G242600.1	Wheat	extracellular	67.23	56.67
Os07t0484900-01	Rice	cytosol	30.51	50.47
Os10t0150300-01	Rice	extracellular	55.37	50.0
Os10t0150400-01	Rice	extracellular	59.89	47.32
Os10t0150600-01	Rice	extracellular	61.02	47.16
Os10t0150700-01	Rice	extracellular	60.45	46.72
Os10t0150800-01	Rice	extracellular	59.89	46.29
Zm00001d030314_P001	Maize	extracellular	55.93	45.0
EER91738	Sorghum	mitochondrion	56.5	40.65
KRH29118	Soybean	nucleus	29.94	33.54
EER91737	Sorghum	extracellular	51.41	27.41
GSMUA_AchrUn_...	Banana	extracellular	36.16	23.7
PGSC0003DMT400011345	Potato	extracellular	28.81	23.18
Zm00001d030316_P001	Maize	extracellular	60.45	22.25
Solyc10g054900.1.1	Tomato	extracellular	28.81	22.17
GSMUA_Achr5P11390_001	Banana	extracellular, golgi	44.07	21.14
PGSC0003DMT400003134	Potato	cytosol	28.25	20.16
EER94340	Sorghum	extracellular	58.76	19.85
KRH60720	Soybean	extracellular	29.94	17.79
CDY66796	Canola	endoplasmic reticulum, extracellular, vacuole	30.51	16.31
VIT_03s0038g01850.t01	Wine grape	extracellular	32.77	14.87
AT2G21140.1	Thale cress	extracellular, plasma membrane	26.55	14.64
VIT_03s0038g01860.t01	Wine grape	extracellular, plasma membrane	30.51	13.85
CDY15914	Canola	extracellular, golgi, vacuole	26.55	13.58
Bra030319.1-P	Field mustard	extracellular	26.55	13.2
CDX99616	Canola	extracellular, golgi, vacuole	25.42	12.89
VIT_03s0038g01830.t01	Wine grape	extracellular, plasma membrane, vacuole	36.16	12.77
AT4G38770.1	Thale cress	extracellular, plasma membrane, vacuole	29.94	11.83
CDY41945	Canola	extracellular	15.25	11.49
Bra010727.1-P	Field mustard	extracellular, plasma membrane, vacuole	28.81	11.04
CDY12101	Canola	extracellular, plasma membrane, vacuole	27.68	11.01
Bra011893.1-P	Field mustard	extracellular, vacuole	14.69	10.53
PGSC0003DMT400004126	Potato	extracellular, plasma membrane, vacuole	32.2	9.73

Protein Annotations

EnsemblPlants:TraesCSU01G024500.1	EnsemblPlantsGene:TraesCSU01G024500	PANTHER:PTHR33935	PANTHER:PTHR33935:SF4	PFAM:PF01190	SEG:seg
SignalP:SignalP-noTM	TMHMM:TMhelix	MapMan:35.2	:	:	:

Description

No Description!

Coordinates

chrUn:-:24791468..24792258

Molecular Weight (calculated)

18120.8 Da

IEP (calculated)

8.982

GRAVY (calculated)

-0.073

Length

177 amino acids

Sequence
(BLAST)

001: MAAPTAFFLG VCAVLLAAAV ANADAASVVV GLAKCAGCTR KDMKAEETFK RLRVAIKCRN VEGEYESKAV GGLDRTGAFS VPLATDLHGA DCVAQLHSAA
101: SNAPCPGQEP SKIVPLSEGA TTFGVVAGAK TTATPSVASP ECASAFCPST TPWKKPRGGG HHKKKHNPHK PETKALP

Best Arabidopsis Sequence Match ( AT4G38770.1 )
(BLAST)

001: MRILPEPRGS VPCLLLLVSV LLSATLSLAR VVEVVGYAES KIKTPHAFSG LRVTIDCKVN KGHFVTKGSG NIDDKGKFGL NIPHDIVSDN GALKEECYAQ
101: LHSAAGTPCP AHDGLESTKI VFLSKSGDKH ILGLKQNLKF SPEICVSKFF WPMPKLPPFK GFDHPFPLPP PLELPPFLKK PCPPKYSPPV EVPPPVPVYE
201: PPPKKEIPPP VPVYDPPPKK EVPPPVPVYK PPPKVELPPP IPKKPCPPKP PKIEHPPPVP VYKPPPKIEK PPPVPVYKPP PKIEHPPPVP VHKLPKKPCP
301: PKKVDPPPVP VHKPPTKKPC PPKKVDPPPV PVHKPPPKIV IPPPKIEHPP PVPVYKPPPK IEHPPIYIPP IVKKPCPPPV PIYKPPVVIP KKPCPPPVPV
401: YKPPVVVIPK KPCPPLPQLP PLPKFPPLPP KYIHHPKFGK WPPLPPHP

Arabidopsis Description

PRP4Proline-rich protein 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9T0I5]
SUBAcon: [plasma membrane,extracellular,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.