Factsheet for TraesCS2A01G062400.1

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, vacuole, plasma membrane

Predictor Summary:

extracellular 4
endoplasmic reticulum 5
vacuole 5
plasma membrane 5
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, plasma membrane, vacuole
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCSU01G225700.1	Wheat	endoplasmic reticulum, extracellular, plasma membrane	91.33	89.27
TraesCSU01G024500.1	Wheat	endoplasmic reticulum, extracellular, plasma membrane	91.33	89.27
TraesCS2D01G061200.1	Wheat	endoplasmic reticulum, extracellular, plasma membrane	90.75	88.7
HORVU2Hr1G011470.1	Barley	mitochondrion	82.08	62.56
TraesCS2A01G062700.1	Wheat	extracellular	73.41	61.35
TraesCS2A01G063100.1	Wheat	extracellular	71.68	59.33
TraesCS2A01G062200.1	Wheat	extracellular	71.68	58.77
TraesCS2A01G062900.1	Wheat	extracellular	71.1	58.57
TraesCS2A01G061800.1	Wheat	extracellular	70.52	58.1
TraesCS2A01G062800.1	Wheat	extracellular	70.52	58.1
TraesCS2A01G061900.1	Wheat	extracellular	69.94	57.35
TraesCS2A01G062000.1	Wheat	extracellular	69.36	56.87
TraesCS2A01G062100.1	Wheat	extracellular	69.36	56.87
TraesCS2A01G063000.1	Wheat	extracellular	70.52	56.48
TraesCS2A01G062600.1	Wheat	extracellular	67.63	54.67
Os07t0484900-01	Rice	cytosol	32.37	52.34
Os10t0150300-01	Rice	extracellular	57.23	50.51
Os10t0150400-01	Rice	extracellular	60.12	46.43
Os10t0150700-01	Rice	extracellular	60.69	45.85
Os10t0150600-01	Rice	extracellular	60.12	45.41
Os10t0150800-01	Rice	extracellular	59.54	44.98
Zm00001d030314_P001	Maize	extracellular	55.49	43.64
EER91738	Sorghum	mitochondrion	55.49	39.02
KRH29118	Soybean	nucleus	31.21	34.18
TraesCS6A01G103600.1	Wheat	extracellular	49.71	31.62
TraesCS4A01G068900.1	Wheat	extracellular, golgi, vacuole	48.55	29.89
TraesCS4A01G068700.1	Wheat	extracellular	38.73	28.39
EER91737	Sorghum	extracellular	50.29	26.2
GSMUA_AchrUn_...	Banana	extracellular	36.99	23.7
PGSC0003DMT400011345	Potato	extracellular	27.17	21.36
Zm00001d030316_P001	Maize	extracellular	58.96	21.21
Solyc10g054900.1.1	Tomato	extracellular	27.75	20.87
GSMUA_Achr5P11390_001	Banana	extracellular, golgi	43.35	20.33
PGSC0003DMT400003134	Potato	cytosol	28.32	19.76
EER94340	Sorghum	extracellular	57.8	19.08
KRH60720	Soybean	extracellular	32.37	18.79
CDY66796	Canola	endoplasmic reticulum, extracellular, vacuole	31.79	16.62
TraesCS3A01G524900.1	Wheat	extracellular, plasma membrane	46.24	15.69
VIT_03s0038g01850.t01	Wine grape	extracellular	34.1	15.13
AT2G21140.1	Thale cress	extracellular, plasma membrane	27.17	14.64
VIT_03s0038g01860.t01	Wine grape	extracellular, plasma membrane	31.79	14.1
CDY15914	Canola	extracellular, golgi, vacuole	27.17	13.58
Bra030319.1-P	Field mustard	extracellular	27.17	13.2
VIT_03s0038g01830.t01	Wine grape	extracellular, plasma membrane, vacuole	37.57	12.97
CDX99616	Canola	extracellular, golgi, vacuole	26.01	12.89
CDY41945	Canola	extracellular	16.76	12.34
AT4G38770.1	Thale cress	extracellular, plasma membrane, vacuole	31.79	12.28
Bra010727.1-P	Field mustard	extracellular, plasma membrane, vacuole	31.21	11.69
CDY12101	Canola	extracellular, plasma membrane, vacuole	30.06	11.69
Bra011893.1-P	Field mustard	extracellular, vacuole	16.18	11.34
PGSC0003DMT400004126	Potato	extracellular, plasma membrane, vacuole	32.95	9.73

Protein Annotations

EnsemblPlants:TraesCS2A01G062400.1	EnsemblPlantsGene:TraesCS2A01G062400	PANTHER:PTHR33935	PANTHER:PTHR33935:SF4	PFAM:PF01190	SEG:seg
SignalP:SignalP-noTM	TMHMM:TMhelix	MapMan:35.2	:	:	:

Description

No Description!

Coordinates

chr2A:-:27733773..27734294

Molecular Weight (calculated)

17707.4 Da

IEP (calculated)

9.949

GRAVY (calculated)

-0.106

Length

173 amino acids

Sequence
(BLAST)

001: MAAPRALVLG LLLVVTVANV GAASVVVGLA KCAGCTRKDM KAEETFKRLR VAIKCRNAHG EYESKAVGGL DRTGAFSVPL AADLQGADCV AQLHSAASNA
101: PCPGQEPSKI VPLSEGATTF GVVAGAKTTA TQSVASPECA SAFCPSTTQK KPRGGGHHKK KHNPHKPETK ALP

Best Arabidopsis Sequence Match ( AT4G38770.1 )
(BLAST)

001: MRILPEPRGS VPCLLLLVSV LLSATLSLAR VVEVVGYAES KIKTPHAFSG LRVTIDCKVN KGHFVTKGSG NIDDKGKFGL NIPHDIVSDN GALKEECYAQ
101: LHSAAGTPCP AHDGLESTKI VFLSKSGDKH ILGLKQNLKF SPEICVSKFF WPMPKLPPFK GFDHPFPLPP PLELPPFLKK PCPPKYSPPV EVPPPVPVYE
201: PPPKKEIPPP VPVYDPPPKK EVPPPVPVYK PPPKVELPPP IPKKPCPPKP PKIEHPPPVP VYKPPPKIEK PPPVPVYKPP PKIEHPPPVP VHKLPKKPCP
301: PKKVDPPPVP VHKPPTKKPC PPKKVDPPPV PVHKPPPKIV IPPPKIEHPP PVPVYKPPPK IEHPPIYIPP IVKKPCPPPV PIYKPPVVIP KKPCPPPVPV
401: YKPPVVVIPK KPCPPLPQLP PLPKFPPLPP KYIHHPKFGK WPPLPPHP

Arabidopsis Description

PRP4Proline-rich protein 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9T0I5]
SUBAcon: [plasma membrane,extracellular,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.