Factsheet for TraesCS3A01G524900.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, extracellular

Predictor Summary:

extracellular 5
endoplasmic reticulum 4
vacuole 4
plasma membrane 5
golgi 4
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, plasma membrane
Any Predictor:	cytosol, secretory
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU3Hr1G114320.1	Barley	extracellular, plasma membrane	70.0	84.2
TraesCS3B01G592200.1	Wheat	extracellular, plasma membrane	82.75	81.15
TraesCS3D01G530100.1	Wheat	extracellular, plasma membrane	82.94	81.03
TraesCS2A01G062200.1	Wheat	extracellular	21.18	51.18
TraesCS2A01G062700.1	Wheat	extracellular	20.39	50.24
Os10t0148700-01	Rice	extracellular	29.61	50.17
TraesCS2A01G063000.1	Wheat	extracellular	20.98	49.54
TraesCS2A01G061800.1	Wheat	extracellular	20.39	49.52
TraesCS2A01G062900.1	Wheat	extracellular	20.39	49.52
TraesCS2A01G062800.1	Wheat	extracellular	20.2	49.05
TraesCS2A01G062100.1	Wheat	extracellular	20.2	48.82
TraesCS2A01G061900.1	Wheat	extracellular	20.2	48.82
TraesCS2A01G063100.1	Wheat	extracellular	20.0	48.8
TraesCS2A01G062000.1	Wheat	extracellular	19.61	47.39
TraesCS2A01G062600.1	Wheat	extracellular	19.61	46.73
TraesCS2A01G062400.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	15.69	46.24
TraesCS6A01G103600.1	Wheat	extracellular	20.0	37.5
TraesCS4A01G068700.1	Wheat	extracellular	15.49	33.47
GSMUA_AchrUn_...	Banana	extracellular	17.45	32.96
TraesCS4A01G068900.1	Wheat	extracellular, golgi, vacuole	18.04	32.74
KRH29118	Soybean	nucleus	9.61	31.01
PGSC0003DMT400011345	Potato	extracellular	12.35	28.64
VIT_03s0038g01850.t01	Wine grape	extracellular	21.57	28.21
Solyc10g054900.1.1	Tomato	extracellular	12.55	27.83
GSMUA_Achr5P11390_001	Banana	extracellular, golgi	19.8	27.37
VIT_03s0038g01860.t01	Wine grape	extracellular, plasma membrane	20.39	26.67
KRH60720	Soybean	extracellular	15.49	26.51
PGSC0003DMT400003134	Potato	cytosol	12.55	25.81
VIT_03s0038g01830.t01	Wine grape	extracellular, plasma membrane, vacuole	24.9	25.35
CDY66796	Canola	endoplasmic reticulum, extracellular, vacuole	15.49	23.87
CDY41945	Canola	extracellular	10.98	23.83
CDY12101	Canola	extracellular, plasma membrane, vacuole	20.2	23.15
Bra011893.1-P	Field mustard	extracellular, vacuole	10.98	22.67
Bra010727.1-P	Field mustard	extracellular, plasma membrane, vacuole	20.39	22.51
AT4G38770.1	Thale cress	extracellular, plasma membrane, vacuole	19.61	22.32
PGSC0003DMT400004126	Potato	extracellular, plasma membrane, vacuole	25.1	21.84
AT2G21140.1	Thale cress	extracellular, plasma membrane	13.73	21.81
CDY15914	Canola	extracellular, golgi, vacuole	14.71	21.68
Bra030319.1-P	Field mustard	extracellular	15.1	21.63
CDX99616	Canola	extracellular, golgi, vacuole	14.71	21.49

Protein Annotations

EnsemblPlants:TraesCS3A01G524900.1	EnsemblPlantsGene:TraesCS3A01G524900	PANTHER:PTHR33935	PANTHER:PTHR33935:SF6	PFAM:PF01190	PRINTS:PR01217
SEG:seg	SignalP:SignalP-noTM	TMHMM:TMhelix	MapMan:35.2	:	:

Description

No Description!

Coordinates

chr3A:+:739399439..739400971

Molecular Weight (calculated)

51425.5 Da

IEP (calculated)

5.122

GRAVY (calculated)

-0.083

Length

510 amino acids

Sequence
(BLAST)

001: MVAMEGGGGG RLLLRVLIVC AGALMAAAAE GGGGGGGDTS VVFVVGMAQC AGCGRKSLGA EAAFRGLKVA ITCKNESKAV ASLDGTGAFE VLLPADAGAS
101: ECLAQLQSAA SGAPCPGQEP SRIVPLLAEG TFVAVAGKAA RGGTSAAPEC AAANICFPCH AFGRKPLFAH RRMKPMPVYA PPVYGTPVPA CLCTPTPAPG
201: CQCPSAMPVY GTPVPEYYPP PAPEYGTATP VYAPPVYGTA TPVYAPPTVP VYGTPTPVYA PPVYGTPTPV YAPPTAPVYG TPTPDCPPEA PEYGTPTPVY
301: APPTAPVYGT PTPDCPPEAP EYGTPTPVYA PPTASRCLCT PTPEPGCQCP STKPAYGTPT PVYAPPTAPR CLCTPTPEPG CQCPTPTPTP VYVAPPTPQL
401: PPPTPVYGTP SPVYAPPTAP VYGTPSPVYA PPTAPVYGTP SPRCLCTPTP APGCECPAPT PTPVYGTPAP TTYPPAAPAY PRPAPEYGAP PAPECPPEYG
501: TPIYTPPGHQ

Best Arabidopsis Sequence Match ( AT1G54970.1 )
(BLAST)

001: MAITRASFAI CILLSLATIA TADYYAPSSP PVYTSPVNKP TLPPPVYTPP VHKPTLPPPV YTPPVHKPTL SPPVYTKPTL PPPAYTPPVY NKPTLPAPVY
101: TPPVYKPTLS PPVYTKPTLL PPVFKPTLSP PVYTKPTLSP TVYKPTLSPP VNNKPSLSPP VYKPTLSPPV YTKPTLPPPV YKKSPSYSPP PPFAPKPTYT
201: PPTKPYVPEI IKAVGGIILC KNGYETYPIQ GAKAKIVCSE RGSYEKSKNE VVIYSDPTDF KGYFHVVLTH IKNLSNCRVK LYTSPVETCK NPTNVNKGLT
301: GVPFSMYSDK NLKLFNVGPF YFTAGSKAAP ATPRY

Arabidopsis Description

PRP1Proline-rich protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9FZ35]
SUBAcon: [endoplasmic reticulum,extracellular,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.