Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- extracellular 7
- golgi 4
- plasma membrane 4
- endoplasmic reticulum 4
- vacuole 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2A01G061900.1 | Wheat | extracellular | 88.32 | 89.57 |
| TraesCS2A01G062100.1 | Wheat | extracellular | 87.85 | 89.1 |
| TraesCS2A01G062200.1 | Wheat | extracellular | 87.38 | 88.63 |
| TraesCS2A01G062700.1 | Wheat | extracellular | 85.51 | 88.41 |
| TraesCS2A01G061800.1 | Wheat | extracellular | 86.45 | 88.1 |
| TraesCS2A01G062900.1 | Wheat | extracellular | 85.51 | 87.14 |
| TraesCS2A01G062800.1 | Wheat | extracellular | 84.58 | 86.19 |
| TraesCS2A01G063100.1 | Wheat | extracellular | 82.24 | 84.21 |
| TraesCS2A01G062000.1 | Wheat | extracellular | 82.71 | 83.89 |
| TraesCS2A01G063000.1 | Wheat | extracellular | 84.11 | 83.33 |
| TraesCS2A01G062400.1 | Wheat | endoplasmic reticulum, plasma membrane, vacuole | 54.67 | 67.63 |
| Os10t0150300-01 | Rice | extracellular | 55.14 | 60.2 |
| Os10t0150400-01 | Rice | extracellular | 62.62 | 59.82 |
| Os10t0150700-01 | Rice | extracellular | 63.55 | 59.39 |
| Os10t0150800-01 | Rice | extracellular | 62.62 | 58.52 |
| Os10t0150600-01 | Rice | extracellular | 61.22 | 57.21 |
| Zm00001d030314_P001 | Maize | extracellular | 57.01 | 55.45 |
| HORVU2Hr1G011420.1 | Barley | cytosol | 85.98 | 50.41 |
| EER91738 | Sorghum | mitochondrion | 57.48 | 50.0 |
| Os07t0484900-01 | Rice | cytosol | 24.77 | 49.53 |
| TraesCS6A01G103600.1 | Wheat | extracellular | 50.0 | 39.34 |
| TraesCS4A01G068700.1 | Wheat | extracellular | 41.59 | 37.71 |
| EER91737 | Sorghum | extracellular | 57.94 | 37.35 |
| TraesCS4A01G068900.1 | Wheat | extracellular, golgi, vacuole | 47.2 | 35.94 |
| KRH29118 | Soybean | nucleus | 22.43 | 30.38 |
| GSMUA_AchrUn_... | Banana | extracellular | 37.38 | 29.63 |
| Zm00001d030316_P001 | Maize | extracellular | 65.89 | 29.31 |
| EER94340 | Sorghum | extracellular | 64.95 | 26.53 |
| PGSC0003DMT400011345 | Potato | extracellular | 25.7 | 25.0 |
| Solyc10g054900.1.1 | Tomato | extracellular | 26.17 | 24.35 |
| GSMUA_Achr5P11390_001 | Banana | extracellular, golgi | 41.12 | 23.85 |
| PGSC0003DMT400003134 | Potato | cytosol | 26.17 | 22.58 |
| KRH60720 | Soybean | extracellular | 30.37 | 21.81 |
| CDY66796 | Canola | endoplasmic reticulum, extracellular, vacuole | 31.78 | 20.54 |
| CDY41945 | Canola | extracellular | 21.96 | 20.0 |
| TraesCS3A01G524900.1 | Wheat | extracellular, plasma membrane | 46.73 | 19.61 |
| AT2G21140.1 | Thale cress | extracellular, plasma membrane | 28.5 | 19.0 |
| CDY15914 | Canola | extracellular, golgi, vacuole | 30.37 | 18.79 |
| VIT_03s0038g01850.t01 | Wine grape | extracellular | 34.11 | 18.72 |
| Bra011893.1-P | Field mustard | extracellular, vacuole | 21.5 | 18.62 |
| Bra030319.1-P | Field mustard | extracellular | 30.37 | 18.26 |
| CDX99616 | Canola | extracellular, golgi, vacuole | 28.97 | 17.77 |
| VIT_03s0038g01860.t01 | Wine grape | extracellular, plasma membrane | 32.24 | 17.69 |
| VIT_03s0038g01830.t01 | Wine grape | extracellular, plasma membrane, vacuole | 40.65 | 17.37 |
| AT4G38770.1 | Thale cress | extracellular, plasma membrane, vacuole | 35.98 | 17.19 |
| CDY12101 | Canola | extracellular, plasma membrane, vacuole | 34.11 | 16.4 |
| Bra010727.1-P | Field mustard | extracellular, plasma membrane, vacuole | 35.05 | 16.23 |
| PGSC0003DMT400004126 | Potato | extracellular, plasma membrane, vacuole | 37.38 | 13.65 |
Protein Annotations
| EnsemblPlants:TraesCS2A01G062600.1 | EnsemblPlantsGene:TraesCS2A01G062600 | PANTHER:PTHR33935 | PANTHER:PTHR33935:SF4 | PFAM:PF01190 | SEG:seg |
| SignalP:SignalP-noTM | TMHMM:TMhelix | MapMan:35.2 | : | : | : |
Description
No Description!
Coordinates
chr2A:-:27742401..27743379
Molecular Weight (calculated)
22187.5 Da
IEP (calculated)
7.616
GRAVY (calculated)
-0.302
Length
214 amino acids
Sequence
(BLAST)
(BLAST)
001: MAAPTRGLVL AVLLAIAVAN AEAASVVVGL AKCTDCTRKN MKAEEAFKGL EVAIKCKNVH GDYESKAVGA IDGTGAFSVP LASDLHGADC VAQLHSAASN
101: VPCAGQEPSK IAPVSESTTF SIIAGDNTAT LSEASPECAS MKLCGPIKKH IIEHFHHKKP VPPKPEPKPQ PHPDYGPVPK PEPKPQPHRP DYHPVPPTPT
201: YGGSGGGGGY HGHH
101: VPCAGQEPSK IAPVSESTTF SIIAGDNTAT LSEASPECAS MKLCGPIKKH IIEHFHHKKP VPPKPEPKPQ PHPDYGPVPK PEPKPQPHRP DYHPVPPTPT
201: YGGSGGGGGY HGHH
001: MRILPEPRGS VPCLLLLVSV LLSATLSLAR VVEVVGYAES KIKTPHAFSG LRVTIDCKVN KGHFVTKGSG NIDDKGKFGL NIPHDIVSDN GALKEECYAQ
101: LHSAAGTPCP AHDGLESTKI VFLSKSGDKH ILGLKQNLKF SPEICVSKFF WPMPKLPPFK GFDHPFPLPP PLELPPFLKK PCPPKYSPPV EVPPPVPVYE
201: PPPKKEIPPP VPVYDPPPKK EVPPPVPVYK PPPKVELPPP IPKKPCPPKP PKIEHPPPVP VYKPPPKIEK PPPVPVYKPP PKIEHPPPVP VHKLPKKPCP
301: PKKVDPPPVP VHKPPTKKPC PPKKVDPPPV PVHKPPPKIV IPPPKIEHPP PVPVYKPPPK IEHPPIYIPP IVKKPCPPPV PIYKPPVVIP KKPCPPPVPV
401: YKPPVVVIPK KPCPPLPQLP PLPKFPPLPP KYIHHPKFGK WPPLPPHP
101: LHSAAGTPCP AHDGLESTKI VFLSKSGDKH ILGLKQNLKF SPEICVSKFF WPMPKLPPFK GFDHPFPLPP PLELPPFLKK PCPPKYSPPV EVPPPVPVYE
201: PPPKKEIPPP VPVYDPPPKK EVPPPVPVYK PPPKVELPPP IPKKPCPPKP PKIEHPPPVP VYKPPPKIEK PPPVPVYKPP PKIEHPPPVP VHKLPKKPCP
301: PKKVDPPPVP VHKPPTKKPC PPKKVDPPPV PVHKPPPKIV IPPPKIEHPP PVPVYKPPPK IEHPPIYIPP IVKKPCPPPV PIYKPPVVIP KKPCPPPVPV
401: YKPPVVVIPK KPCPPLPQLP PLPKFPPLPP KYIHHPKFGK WPPLPPHP
Arabidopsis Description
PRP4Proline-rich protein 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9T0I5]
SUBAcon: [extracellular,plasma membrane,vacuole]
SUBAcon: [extracellular,plasma membrane,vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.