Subcellular Localization
min:
: max
Winner_takes_all: extracellular, plasma membrane
Predictor Summary:
Predictor Summary:
- extracellular 5
- golgi 4
- plasma membrane 5
- endoplasmic reticulum 4
- vacuole 4
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3D01G530100.1 | Wheat | extracellular, plasma membrane | 87.31 | 86.97 |
| HORVU3Hr1G114320.1 | Barley | extracellular, plasma membrane | 68.46 | 83.96 |
| TraesCS3A01G524900.1 | Wheat | extracellular, plasma membrane | 81.15 | 82.75 |
| TraesCS2B01G075500.1 | Wheat | extracellular | 16.15 | 50.6 |
| Os10t0148700-01 | Rice | extracellular | 28.65 | 49.5 |
| TraesCS2B01G075800.1 | Wheat | extracellular | 19.62 | 49.04 |
| TraesCS2B01G075700.1 | Wheat | extracellular | 19.81 | 48.82 |
| TraesCS2B01G075400.1 | Wheat | extracellular | 19.23 | 48.31 |
| TraesCS2B01G075600.1 | Wheat | extracellular | 19.23 | 47.62 |
| TraesCS2B01G075300.1 | Wheat | extracellular | 18.85 | 46.67 |
| GSMUA_AchrUn_... | Banana | extracellular | 17.31 | 33.33 |
| TraesCS4B01G225800.1 | Wheat | extracellular | 15.0 | 33.19 |
| TraesCS4B01G226000.1 | Wheat | extracellular, golgi, vacuole | 16.35 | 32.57 |
| KRH29118 | Soybean | nucleus | 8.85 | 29.11 |
| GSMUA_Achr5P11390_001 | Banana | extracellular, golgi | 19.23 | 27.1 |
| VIT_03s0038g01850.t01 | Wine grape | extracellular | 20.0 | 26.67 |
| PGSC0003DMT400011345 | Potato | extracellular | 11.15 | 26.36 |
| KRH60720 | Soybean | extracellular | 15.0 | 26.17 |
| Solyc10g054900.1.1 | Tomato | extracellular | 11.54 | 26.09 |
| VIT_03s0038g01860.t01 | Wine grape | extracellular, plasma membrane | 18.85 | 25.13 |
| PGSC0003DMT400003134 | Potato | cytosol | 11.73 | 24.6 |
| VIT_03s0038g01830.t01 | Wine grape | extracellular, plasma membrane, vacuole | 23.65 | 24.55 |
| CDY41945 | Canola | extracellular | 10.77 | 23.83 |
| CDY66796 | Canola | endoplasmic reticulum, extracellular, vacuole | 14.81 | 23.26 |
| CDY12101 | Canola | extracellular, plasma membrane, vacuole | 19.81 | 23.15 |
| Bra011893.1-P | Field mustard | extracellular, vacuole | 10.77 | 22.67 |
| AT4G38770.1 | Thale cress | extracellular, plasma membrane, vacuole | 19.42 | 22.54 |
| Bra010727.1-P | Field mustard | extracellular, plasma membrane, vacuole | 19.81 | 22.29 |
| PGSC0003DMT400004126 | Potato | extracellular, plasma membrane, vacuole | 24.04 | 21.33 |
| AT2G21140.1 | Thale cress | extracellular, plasma membrane | 13.08 | 21.18 |
| CDY15914 | Canola | extracellular, golgi, vacuole | 13.65 | 20.52 |
| Bra030319.1-P | Field mustard | extracellular | 14.04 | 20.51 |
| CDX99616 | Canola | extracellular, golgi, vacuole | 13.65 | 20.34 |
Protein Annotations
| EnsemblPlants:TraesCS3B01G592200.1 | EnsemblPlantsGene:TraesCS3B01G592200 | PANTHER:PTHR33935 | PANTHER:PTHR33935:SF6 | PFAM:PF01190 | SEG:seg |
| SignalP:SignalP-noTM | MapMan:35.2 | : | : | : | : |
Description
No Description!
Coordinates
chr3B:+:816314301..816315863
Molecular Weight (calculated)
52716.0 Da
IEP (calculated)
5.688
GRAVY (calculated)
-0.107
Length
520 amino acids
Sequence
(BLAST)
(BLAST)
001: MGAMEGAGGR LLLRVLIVCA GALIAGGEGG GDTSAVVVVG MAQCAGCGRK SLGAEAAFRG LKVAITCKNE SKAVASLDGT GAFAVPLPPG AGASECLAQL
101: QSAASGEPCP GQEPSRIVPM PSEGAGDGEG TFVAVAGKAT RGRTSAAAPE CAAANICFPC HAFGRKPFFA HRRMKPMPVY APPVYGTPVP ACLCTPTPAP
201: GCQCPYPTPV YGTPVPEYFP PPAPECGTPD CPPESPEYGT PTPVYAPPVY ATPKPVYAPP VYATPTPVYA PPVYATPTPV YAPPVYATPT PVYAPPVYAT
301: PTPVYAPPTA PVYGTPTPVY APPVYGTPSP VYAPPTAPVY GTPTPDCPPD QAPLYAPPTA PVYGTPAPRC LCTPTPEPGC QCPSPTPVYG TPSASCLCTP
401: TPEPGCQCPT PTTTPVYVAP PTPQLPPPTP VYGTPSPVYA PPTAPVYGTP APRCLCTPTP APGCQCPAPT PTPVYGTPTP TTYPPAAPVY PRPAPEYGAP
501: PAPECPPEYG TPIYTPPGHH
101: QSAASGEPCP GQEPSRIVPM PSEGAGDGEG TFVAVAGKAT RGRTSAAAPE CAAANICFPC HAFGRKPFFA HRRMKPMPVY APPVYGTPVP ACLCTPTPAP
201: GCQCPYPTPV YGTPVPEYFP PPAPECGTPD CPPESPEYGT PTPVYAPPVY ATPKPVYAPP VYATPTPVYA PPVYATPTPV YAPPVYATPT PVYAPPVYAT
301: PTPVYAPPTA PVYGTPTPVY APPVYGTPSP VYAPPTAPVY GTPTPDCPPD QAPLYAPPTA PVYGTPAPRC LCTPTPEPGC QCPSPTPVYG TPSASCLCTP
401: TPEPGCQCPT PTTTPVYVAP PTPQLPPPTP VYGTPSPVYA PPTAPVYGTP APRCLCTPTP APGCQCPAPT PTPVYGTPTP TTYPPAAPVY PRPAPEYGAP
501: PAPECPPEYG TPIYTPPGHH
001: MAITRASFAI CILLSLATIA TADYYAPSSP PVYTSPVNKP TLPPPVYTPP VHKPTLPPPV YTPPVHKPTL SPPVYTKPTL PPPAYTPPVY NKPTLPAPVY
101: TPPVYKPTLS PPVYTKPTLL PPVFKPTLSP PVYTKPTLSP TVYKPTLSPP VNNKPSLSPP VYKPTLSPPV YTKPTLPPPV YKKSPSYSPP PPFAPKPTYT
201: PPTKPYVPEI IKAVGGIILC KNGYETYPIQ GAKAKIVCSE RGSYEKSKNE VVIYSDPTDF KGYFHVVLTH IKNLSNCRVK LYTSPVETCK NPTNVNKGLT
301: GVPFSMYSDK NLKLFNVGPF YFTAGSKAAP ATPRY
101: TPPVYKPTLS PPVYTKPTLL PPVFKPTLSP PVYTKPTLSP TVYKPTLSPP VNNKPSLSPP VYKPTLSPPV YTKPTLPPPV YKKSPSYSPP PPFAPKPTYT
201: PPTKPYVPEI IKAVGGIILC KNGYETYPIQ GAKAKIVCSE RGSYEKSKNE VVIYSDPTDF KGYFHVVLTH IKNLSNCRVK LYTSPVETCK NPTNVNKGLT
301: GVPFSMYSDK NLKLFNVGPF YFTAGSKAAP ATPRY
Arabidopsis Description
PRP1Proline-rich protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9FZ35]
SUBAcon: [extracellular,endoplasmic reticulum,vacuole]
SUBAcon: [extracellular,endoplasmic reticulum,vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.