Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, extracellular
Predictor Summary:
Predictor Summary:
- extracellular 5
- endoplasmic reticulum 4
- vacuole 4
- plasma membrane 5
- golgi 4
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3B01G592200.1 | Wheat | extracellular, plasma membrane | 86.97 | 87.31 |
| HORVU3Hr1G114320.1 | Barley | extracellular, plasma membrane | 68.2 | 83.96 |
| TraesCS3A01G524900.1 | Wheat | extracellular, plasma membrane | 81.03 | 82.94 |
| Os10t0148700-01 | Rice | extracellular | 30.27 | 52.49 |
| TraesCS2D01G061400.1 | Wheat | extracellular | 20.88 | 51.9 |
| TraesCS2D01G061000.1 | Wheat | extracellular | 20.31 | 50.24 |
| TraesCS2D01G061300.1 | Wheat | extracellular | 20.11 | 49.76 |
| TraesCS2D01G061100.1 | Wheat | extracellular | 19.73 | 48.82 |
| TraesCS2D01G061200.1 | Wheat | endoplasmic reticulum, extracellular, plasma membrane | 16.48 | 48.59 |
| TraesCS6D01G092200.1 | Wheat | extracellular | 20.88 | 37.59 |
| TraesCS4D01G226500.1 | Wheat | extracellular | 16.67 | 37.02 |
| TraesCS4D01G226700.1 | Wheat | extracellular, plasma membrane, vacuole | 17.82 | 35.09 |
| GSMUA_AchrUn_... | Banana | extracellular | 17.82 | 34.44 |
| KRH29118 | Soybean | nucleus | 9.39 | 31.01 |
| PGSC0003DMT400011345 | Potato | extracellular | 12.45 | 29.55 |
| GSMUA_Achr5P11390_001 | Banana | extracellular, golgi | 20.11 | 28.46 |
| Solyc10g054900.1.1 | Tomato | extracellular | 12.45 | 28.26 |
| VIT_03s0038g01850.t01 | Wine grape | extracellular | 21.07 | 28.21 |
| KRH60720 | Soybean | extracellular | 15.52 | 27.18 |
| VIT_03s0038g01860.t01 | Wine grape | extracellular, plasma membrane | 19.92 | 26.67 |
| PGSC0003DMT400003134 | Potato | cytosol | 12.45 | 26.21 |
| VIT_03s0038g01830.t01 | Wine grape | extracellular, plasma membrane, vacuole | 24.71 | 25.75 |
| CDY41945 | Canola | extracellular | 11.11 | 24.68 |
| CDY66796 | Canola | endoplasmic reticulum, extracellular, vacuole | 15.33 | 24.17 |
| Bra011893.1-P | Field mustard | extracellular, vacuole | 11.11 | 23.48 |
| CDY12101 | Canola | extracellular, plasma membrane, vacuole | 19.73 | 23.15 |
| Bra010727.1-P | Field mustard | extracellular, plasma membrane, vacuole | 19.92 | 22.51 |
| AT4G38770.1 | Thale cress | extracellular, plasma membrane, vacuole | 19.16 | 22.32 |
| AT2G21140.1 | Thale cress | extracellular, plasma membrane | 13.6 | 22.12 |
| PGSC0003DMT400004126 | Potato | extracellular, plasma membrane, vacuole | 24.71 | 22.01 |
| CDY15914 | Canola | extracellular, golgi, vacuole | 14.18 | 21.39 |
| Bra030319.1-P | Field mustard | extracellular | 14.56 | 21.35 |
| CDX99616 | Canola | extracellular, golgi, vacuole | 14.18 | 21.2 |
Protein Annotations
| EnsemblPlants:TraesCS3D01G530100.1 | EnsemblPlantsGene:TraesCS3D01G530100 | PANTHER:PTHR33935 | PANTHER:PTHR33935:SF6 | PFAM:PF01190 | SEG:seg |
| SignalP:SignalP-noTM | TMHMM:TMhelix | MapMan:35.2 | : | : | : |
Description
No Description!
Coordinates
chr3D:+:607011615..607013183
Molecular Weight (calculated)
52743.9 Da
IEP (calculated)
4.549
GRAVY (calculated)
-0.134
Length
522 amino acids
Sequence
(BLAST)
(BLAST)
001: MGAMEGGGGG RLLLRVLIVC AGALMMAVAE ADAGGGDSSV VVVVGMAQCA GCGRKSLGAE AAFKGLMVAI TCKKGNDSGG GEYESKAVAS LDGTGAFAVP
101: LPADAGLGVR GASDSECFAQ LQSAASGEPC PGQEPSRIEP LLAEGEGTFV AVAGKATRGR TSAAAPECAA ANICFPCHGF GRKPLFAHRR MKPMPVYAPP
201: VYGTPVPACL CTPTPAPGCQ CPSAVPVYGT PVPEYFPPPA PECGTPDCPP ESPEYGTPTP VYAPPVYGTP TPVYAPPVYG TPTPVYAPPV YGTPTPVYAP
301: PVYGTPTPVY APPTAPVYGT PTPVYAPPTA PVYGTPTPVY APPVYGTPTP VYAPPTAPVY GTPTPDCPPD QAPEYGTPAP RCMCTPTPEP GCQCPSPTPV
401: YGTPSPSCLC TPTPEPGCQC PTPTPTPVYV APPTPELPPP TPVYAPPTAP VYGTPSPRCL CTPTPAPGCE CPAPTPTPVY GTPTPTPAAP AYPRPAPEYG
501: APPAPECPPE YGTPIYTPPG HH
101: LPADAGLGVR GASDSECFAQ LQSAASGEPC PGQEPSRIEP LLAEGEGTFV AVAGKATRGR TSAAAPECAA ANICFPCHGF GRKPLFAHRR MKPMPVYAPP
201: VYGTPVPACL CTPTPAPGCQ CPSAVPVYGT PVPEYFPPPA PECGTPDCPP ESPEYGTPTP VYAPPVYGTP TPVYAPPVYG TPTPVYAPPV YGTPTPVYAP
301: PVYGTPTPVY APPTAPVYGT PTPVYAPPTA PVYGTPTPVY APPVYGTPTP VYAPPTAPVY GTPTPDCPPD QAPEYGTPAP RCMCTPTPEP GCQCPSPTPV
401: YGTPSPSCLC TPTPEPGCQC PTPTPTPVYV APPTPELPPP TPVYAPPTAP VYGTPSPRCL CTPTPAPGCE CPAPTPTPVY GTPTPTPAAP AYPRPAPEYG
501: APPAPECPPE YGTPIYTPPG HH
001: MAITRASFAI CILLSLATIA TADYYAPSSP PVYTSPVNKP TLPPPVYTPP VHKPTLPPPV YTPPVHKPTL SPPVYTKPTL PPPAYTPPVY NKPTLPAPVY
101: TPPVYKPTLS PPVYTKPTLL PPVFKPTLSP PVYTKPTLSP TVYKPTLSPP VNNKPSLSPP VYKPTLSPPV YTKPTLPPPV YKKSPSYSPP PPFAPKPTYT
201: PPTKPYVPEI IKAVGGIILC KNGYETYPIQ GAKAKIVCSE RGSYEKSKNE VVIYSDPTDF KGYFHVVLTH IKNLSNCRVK LYTSPVETCK NPTNVNKGLT
301: GVPFSMYSDK NLKLFNVGPF YFTAGSKAAP ATPRY
101: TPPVYKPTLS PPVYTKPTLL PPVFKPTLSP PVYTKPTLSP TVYKPTLSPP VNNKPSLSPP VYKPTLSPPV YTKPTLPPPV YKKSPSYSPP PPFAPKPTYT
201: PPTKPYVPEI IKAVGGIILC KNGYETYPIQ GAKAKIVCSE RGSYEKSKNE VVIYSDPTDF KGYFHVVLTH IKNLSNCRVK LYTSPVETCK NPTNVNKGLT
301: GVPFSMYSDK NLKLFNVGPF YFTAGSKAAP ATPRY
Arabidopsis Description
PRP1Proline-rich protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9FZ35]
SUBAcon: [endoplasmic reticulum,extracellular,vacuole]
SUBAcon: [endoplasmic reticulum,extracellular,vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.