Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- extracellular 7
- endoplasmic reticulum 4
- vacuole 4
- plasma membrane 4
- golgi 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2D01G061000.1 | Wheat | extracellular | 89.1 | 89.1 |
| TraesCS2D01G061400.1 | Wheat | extracellular | 88.63 | 89.05 |
| TraesCS2D01G061100.1 | Wheat | extracellular | 87.68 | 87.68 |
| TraesCS2D01G061200.1 | Wheat | endoplasmic reticulum, extracellular, plasma membrane | 60.19 | 71.75 |
| Os10t0150400-01 | Rice | extracellular | 64.93 | 61.16 |
| Os10t0150700-01 | Rice | extracellular | 66.35 | 61.14 |
| Os10t0150300-01 | Rice | extracellular | 56.4 | 60.71 |
| Os10t0150600-01 | Rice | extracellular | 65.88 | 60.7 |
| Os10t0150800-01 | Rice | extracellular | 65.4 | 60.26 |
| Zm00001d030314_P001 | Maize | extracellular | 59.24 | 56.82 |
| Os07t0484900-01 | Rice | cytosol | 26.54 | 52.34 |
| EER91738 | Sorghum | mitochondrion | 59.24 | 50.81 |
| TraesCS4D01G226700.1 | Wheat | extracellular, plasma membrane, vacuole | 47.87 | 38.11 |
| EER91737 | Sorghum | extracellular | 59.24 | 37.65 |
| TraesCS6D01G092200.1 | Wheat | extracellular | 51.18 | 37.24 |
| TraesCS4D01G226500.1 | Wheat | extracellular | 39.81 | 35.74 |
| KRH29118 | Soybean | nucleus | 24.64 | 32.91 |
| GSMUA_AchrUn_... | Banana | extracellular | 39.81 | 31.11 |
| Zm00001d030316_P001 | Maize | extracellular | 70.14 | 30.77 |
| EER94340 | Sorghum | extracellular | 69.67 | 28.05 |
| PGSC0003DMT400011345 | Potato | extracellular | 27.01 | 25.91 |
| Solyc10g054900.1.1 | Tomato | extracellular | 27.96 | 25.65 |
| GSMUA_Achr5P11390_001 | Banana | extracellular, golgi | 42.65 | 24.39 |
| PGSC0003DMT400003134 | Potato | cytosol | 27.96 | 23.79 |
| KRH60720 | Soybean | extracellular | 30.81 | 21.81 |
| CDY66796 | Canola | endoplasmic reticulum, extracellular, vacuole | 32.23 | 20.54 |
| TraesCS3D01G530100.1 | Wheat | extracellular, plasma membrane | 49.76 | 20.11 |
| AT2G21140.1 | Thale cress | extracellular, plasma membrane | 29.86 | 19.63 |
| VIT_03s0038g01850.t01 | Wine grape | extracellular | 36.02 | 19.49 |
| CDY15914 | Canola | extracellular, golgi, vacuole | 30.81 | 18.79 |
| CDY41945 | Canola | extracellular | 20.85 | 18.72 |
| Bra030319.1-P | Field mustard | extracellular | 30.81 | 18.26 |
| VIT_03s0038g01860.t01 | Wine grape | extracellular, plasma membrane | 33.65 | 18.21 |
| VIT_03s0038g01830.t01 | Wine grape | extracellular, plasma membrane, vacuole | 42.65 | 17.96 |
| CDX99616 | Canola | extracellular, golgi, vacuole | 29.38 | 17.77 |
| Bra011893.1-P | Field mustard | extracellular, vacuole | 20.38 | 17.41 |
| AT4G38770.1 | Thale cress | extracellular, plasma membrane, vacuole | 36.02 | 16.96 |
| CDY12101 | Canola | extracellular, plasma membrane, vacuole | 34.12 | 16.18 |
| Bra010727.1-P | Field mustard | extracellular, plasma membrane, vacuole | 35.07 | 16.02 |
| PGSC0003DMT400004126 | Potato | extracellular, plasma membrane, vacuole | 39.81 | 14.33 |
Protein Annotations
| EnsemblPlants:TraesCS2D01G061300.1 | EnsemblPlantsGene:TraesCS2D01G061300 | PANTHER:PTHR33935 | PANTHER:PTHR33935:SF4 | PFAM:PF01190 | SEG:seg |
| SignalP:SignalP-noTM | TMHMM:TMhelix | MapMan:35.2 | : | : | : |
Description
No Description!
Coordinates
chr2D:-:25318804..25319535
Molecular Weight (calculated)
21869.2 Da
IEP (calculated)
7.616
GRAVY (calculated)
-0.230
Length
211 amino acids
Sequence
(BLAST)
(BLAST)
001: MAAPRALVLA VLLVIAIANA EATSVVIGLA KCADCTRKNM KAEEAFKGLQ VAIKCKNVDG EYESKAVGSL DGTGAFSVPL ASDLHGADCV AQLHSAASNA
101: SCPGQEPSKI VPVSEGTTFG VIAGANTATP SVASPECASM TLCGPIKKHI IEHFHHKKPV PPKPEPKPQP HPEYHPVPKP EPKPQPHPDY HPVPPMPTYG
201: GGGGGGYHGH H
101: SCPGQEPSKI VPVSEGTTFG VIAGANTATP SVASPECASM TLCGPIKKHI IEHFHHKKPV PPKPEPKPQP HPEYHPVPKP EPKPQPHPDY HPVPPMPTYG
201: GGGGGGYHGH H
001: MANQAAAAAF FLFALAVFSN LELSASSLVS GKISCLDCHR DFDFSGIKVL LKCDGEKKQI TAVAAADGSF RSVLPTADKK GSINCLAKLL GGPEQLYAHK
101: HNLVSELVKS KHDSKVLTTS NPLAFSLSCP KPSRDDIGSM IGDSKTINFP GAGGFGFPPA SFFPFLPIIG IP
101: HNLVSELVKS KHDSKVLTTS NPLAFSLSCP KPSRDDIGSM IGDSKTINFP GAGGFGFPPA SFFPFLPIIG IP
Arabidopsis Description
Pollen Ole e 1 allergen and extensin family protein [Source:UniProtKB/TrEMBL;Acc:Q9FMQ8]
SUBAcon: [extracellular]
SUBAcon: [extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.