Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- extracellular 7
- golgi 4
- plasma membrane 4
- endoplasmic reticulum 4
- vacuole 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6A01G103600.1 | Wheat | extracellular | 90.69 | 96.69 |
| Zm00001d030305_P001 | Maize | extracellular | 61.03 | 69.96 |
| EER94343 | Sorghum | extracellular | 61.38 | 66.92 |
| Os10t0148100-01 | Rice | extracellular | 55.17 | 59.04 |
| TraesCS4D01G226700.1 | Wheat | extracellular, plasma membrane, vacuole | 53.79 | 58.87 |
| HORVU6Hr1G018670.1 | Barley | endoplasmic reticulum | 91.38 | 54.75 |
| TraesCS2D01G061000.1 | Wheat | extracellular | 37.93 | 52.13 |
| TraesCS2D01G061400.1 | Wheat | extracellular | 37.24 | 51.43 |
| TraesCS2D01G061200.1 | Wheat | endoplasmic reticulum, extracellular, plasma membrane | 31.38 | 51.41 |
| TraesCS2D01G061100.1 | Wheat | extracellular | 37.24 | 51.18 |
| TraesCS2D01G061300.1 | Wheat | extracellular | 37.24 | 51.18 |
| TraesCS4D01G226500.1 | Wheat | extracellular | 32.07 | 39.57 |
| GSMUA_AchrUn_... | Banana | extracellular | 32.07 | 34.44 |
| KRH29118 | Soybean | nucleus | 17.93 | 32.91 |
| Solyc10g054900.1.1 | Tomato | extracellular | 23.45 | 29.57 |
| PGSC0003DMT400011345 | Potato | extracellular | 22.07 | 29.09 |
| GSMUA_Achr5P11390_001 | Banana | extracellular, golgi | 34.14 | 26.83 |
| PGSC0003DMT400003134 | Potato | cytosol | 22.07 | 25.81 |
| KRH60720 | Soybean | extracellular | 26.21 | 25.5 |
| VIT_03s0038g01850.t01 | Wine grape | extracellular | 30.34 | 22.56 |
| VIT_03s0038g01860.t01 | Wine grape | extracellular, plasma membrane | 29.31 | 21.79 |
| CDY66796 | Canola | endoplasmic reticulum, extracellular, vacuole | 24.48 | 21.45 |
| AT2G21140.1 | Thale cress | extracellular, plasma membrane | 23.45 | 21.18 |
| TraesCS3D01G530100.1 | Wheat | extracellular, plasma membrane | 37.59 | 20.88 |
| CDY15914 | Canola | extracellular, golgi, vacuole | 24.48 | 20.52 |
| CDX99616 | Canola | extracellular, golgi, vacuole | 24.14 | 20.06 |
| VIT_03s0038g01830.t01 | Wine grape | extracellular, plasma membrane, vacuole | 34.48 | 19.96 |
| Bra030319.1-P | Field mustard | extracellular | 24.14 | 19.66 |
| CDY41945 | Canola | extracellular | 15.86 | 19.57 |
| CDY12101 | Canola | extracellular, plasma membrane, vacuole | 27.93 | 18.2 |
| AT4G38770.1 | Thale cress | extracellular, plasma membrane, vacuole | 27.59 | 17.86 |
| Bra011893.1-P | Field mustard | extracellular, vacuole | 15.17 | 17.81 |
| Bra010727.1-P | Field mustard | extracellular, plasma membrane, vacuole | 28.28 | 17.75 |
| PGSC0003DMT400004126 | Potato | extracellular, plasma membrane, vacuole | 30.69 | 15.19 |
Protein Annotations
| EnsemblPlants:TraesCS6D01G092200.1 | EnsemblPlantsGene:TraesCS6D01G092200 | PANTHER:PTHR33935 | PANTHER:PTHR33935:SF5 | PFAM:PF01190 | SEG:seg |
| SignalP:SignalP-noTM | TMHMM:TMhelix | MapMan:35.2 | : | : | : |
Description
No Description!
Coordinates
chr6D:-:57852174..57853943
Molecular Weight (calculated)
31590.7 Da
IEP (calculated)
9.627
GRAVY (calculated)
-0.256
Length
290 amino acids
Sequence
(BLAST)
(BLAST)
001: MGALPRGLLL LGVCAVLVAA VLADASPASS MVVGLAKCAD CTRKNMKAEA AFAGLQVAVK CKNADGEYET KAVGAVDKSG AFGVPLGADL LREDGELKQD
101: CFAQLHSAPD HPCPGQEPSM IVRQSADGAE KKGFVAVPGE VHYSSQECAS AFLCHFFHKK HLFHKKPALV VPHLKKKAIV IPHIHKKPIV IPHIHKKPIV
201: IPHFHKKPAP VPEYKPPTPT PVYTHPTPVP EHKPPTPVYT HPTPIYHPPA DQKMVQDPET DPQLFKKLLP FIKKNPFFKK FPPAKEDTKP
101: CFAQLHSAPD HPCPGQEPSM IVRQSADGAE KKGFVAVPGE VHYSSQECAS AFLCHFFHKK HLFHKKPALV VPHLKKKAIV IPHIHKKPIV IPHIHKKPIV
201: IPHFHKKPAP VPEYKPPTPT PVYTHPTPVP EHKPPTPVYT HPTPIYHPPA DQKMVQDPET DPQLFKKLLP FIKKNPFFKK FPPAKEDTKP
001: MRILPKSGGG ALCLLFVFAL CSVAHSLSCD VKVVGDVEVI GYSEISKIKI PNAFSGLRVT IECKAADSKG HFVTRGSGEV DETGKFHLNI PHDIVGDDGT
101: LKEACYAHLQ SAFGNPCPAH DGLEASKIVF LSKSGQNHVL GLKKSLKFSP EVCISKFFWH MPKFPLPPPL NLPPLTFPKI KKPCPPIYKP PVVIPKKPCP
201: PKIAHKPIYK PPVPIYKPPV PIYKPPVVIP KKPCPPKIHK PIYKPPVPIY KPPVVIPKKT FPPLHKPIYK HPVPIYKPIF KPPVVVIPKK PCPPLPKFPH
301: FPPKYIPHPK FGKWPPFPSH P
101: LKEACYAHLQ SAFGNPCPAH DGLEASKIVF LSKSGQNHVL GLKKSLKFSP EVCISKFFWH MPKFPLPPPL NLPPLTFPKI KKPCPPIYKP PVVIPKKPCP
201: PKIAHKPIYK PPVPIYKPPV PIYKPPVVIP KKPCPPKIHK PIYKPPVPIY KPPVVIPKKT FPPLHKPIYK HPVPIYKPIF KPPVVVIPKK PCPPLPKFPH
301: FPPKYIPHPK FGKWPPFPSH P
Arabidopsis Description
PRP2Proline-rich protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SKP9]
SUBAcon: [extracellular,plasma membrane]
SUBAcon: [extracellular,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.