Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- extracellular 7
- golgi 6
- plasma membrane 6
- endoplasmic reticulum 5
- vacuole 5
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os10t0150000-01 | Rice | cytosol, nucleus, plastid | 49.03 | 86.32 |
| Os10t0149200-01 | Rice | extracellular | 81.55 | 75.0 |
| Os10t0149000-00 | Rice | extracellular | 79.61 | 74.89 |
| Os10t0149400-00 | Rice | cytosol | 73.79 | 74.15 |
| Os10t0149100-00 | Rice | cytosol, nucleus | 50.97 | 69.54 |
| Os10t0150300-01 | Rice | extracellular | 50.49 | 53.06 |
| Os07t0484900-01 | Rice | cytosol | 24.76 | 47.66 |
| Os10t0150400-01 | Rice | extracellular | 50.49 | 46.43 |
| Os10t0150700-01 | Rice | extracellular | 50.97 | 45.85 |
| Os10t0150800-01 | Rice | extracellular | 50.0 | 44.98 |
| Os10t0150600-01 | Rice | extracellular | 49.03 | 44.1 |
| Os10t0148100-01 | Rice | extracellular | 51.94 | 39.48 |
| Os10t0148700-01 | Rice | extracellular | 52.91 | 36.21 |
| KRH29118 | Soybean | nucleus | 24.27 | 31.65 |
| Os03t0245200-01 | Rice | extracellular | 34.47 | 29.96 |
| Os03t0245300-01 | Rice | extracellular | 35.92 | 29.48 |
| GSMUA_AchrUn_... | Banana | extracellular | 33.01 | 25.19 |
| PGSC0003DMT400011345 | Potato | extracellular | 26.7 | 25.0 |
| Solyc10g054900.1.1 | Tomato | extracellular | 27.18 | 24.35 |
| PGSC0003DMT400003134 | Potato | cytosol | 27.67 | 22.98 |
| GSMUA_Achr5P11390_001 | Banana | extracellular, golgi | 35.92 | 20.05 |
| KRH60720 | Soybean | extracellular | 28.64 | 19.8 |
| CDY66796 | Canola | endoplasmic reticulum, extracellular, vacuole | 26.7 | 16.62 |
| VIT_03s0038g01850.t01 | Wine grape | extracellular | 30.58 | 16.15 |
| VIT_03s0038g01860.t01 | Wine grape | extracellular, plasma membrane | 28.64 | 15.13 |
| AT2G21140.1 | Thale cress | extracellular, plasma membrane | 23.3 | 14.95 |
| CDY15914 | Canola | extracellular, golgi, vacuole | 24.27 | 14.45 |
| Bra030319.1-P | Field mustard | extracellular | 23.79 | 13.76 |
| VIT_03s0038g01830.t01 | Wine grape | extracellular, plasma membrane, vacuole | 33.01 | 13.57 |
| CDX99616 | Canola | extracellular, golgi, vacuole | 22.82 | 13.47 |
| CDY12101 | Canola | extracellular, plasma membrane, vacuole | 27.67 | 12.81 |
| CDY41945 | Canola | extracellular | 14.56 | 12.77 |
| Bra010727.1-P | Field mustard | extracellular, plasma membrane, vacuole | 28.16 | 12.55 |
| AT4G38770.1 | Thale cress | extracellular, plasma membrane, vacuole | 27.18 | 12.5 |
| Bra011893.1-P | Field mustard | extracellular, vacuole | 14.56 | 12.15 |
| PGSC0003DMT400004126 | Potato | extracellular, plasma membrane, vacuole | 30.58 | 10.75 |
Protein Annotations
| EnsemblPlants:Os10t0149800-00 | EnsemblPlantsGene:Os10g0149800 | EntrezGene:4348117 | PANTHER:PTHR33935 | PANTHER:PTHR33935:SF4 | PFAM:PF01190 |
| ProteinID:AAK63892.1 | ProteinID:AAP52129.1 | ProteinID:BAF26085.1 | ProteinID:BAT09902.1 | RefSeq:XP_015614571.1 | SEG:seg |
| SignalP:SignalP-noTM | TMHMM:TMhelix | UniParc:UPI00000A030C | UniProt:Q7XGS8 | MapMan:35.2 | : |
Description
Protein of unknown function DUF1210 family protein. (Os10t0149800-00)
Coordinates
chr10:-:2981620..2982619
Molecular Weight (calculated)
20416.2 Da
IEP (calculated)
7.242
GRAVY (calculated)
0.140
Length
206 amino acids
Sequence
(BLAST)
(BLAST)
001: MAAVARALVL GAVVVCAALV MAVTAAADGE AAVALVVGLA KCGGCSRKNI KAQDAFKGLQ VAIKCKNSDG EYESKAVGDL DGDGAFSVPL AADDLHGAAG
101: CFAQLHSAAS SAPCPGQEPS KIVPLPSTTD NGGNKANTFV AVAGKRMHYS SSAECTSAFL CPFFDYFYNR PQGPKPTPAN GGGAANGGGA AAPAPSPPAG
201: ISQLNF
101: CFAQLHSAAS SAPCPGQEPS KIVPLPSTTD NGGNKANTFV AVAGKRMHYS SSAECTSAFL CPFFDYFYNR PQGPKPTPAN GGGAANGGGA AAPAPSPPAG
201: ISQLNF
001: MCNKKKLDAK EGSWILGGGW NNDFWGGELP SASWIDEISP RNPVWLIRMD GHMALANSLA LKIAGVISLT EDPVGGTIMR MPSGEPTGLL IDAAMELVTP
101: WVKEISVDER REALFRASKY ALTRGVTTVI DLGRYFPGTT DELSWKDFQD VYLYADSSKK MMIRTCLFFP ITTWSRLLDL KLQKGSVLSE WLYLGGVKAF
201: IDGSLGSNSA LFYEEYIDTP NNYGLEVMDP EKLSNFTMAA DKSGLQVAIH AIGDKANDMI LDMYESVAAA NGDRDRRFRI EHAQHLAPGS ANRFGQLHIV
301: ASVQPDHLLD DADSVAKKLG SERAVKESYL FQSLLNGNAL LALGSDWPVC FRKSLHIYNV FTYSQTLLRL FSLQVADINP LHSIRTAVKR IPPKWDHAWI
401: PSERISFTDA LIAQTISAAR AAFLDHHLGS LSPGKLADFV ILSTNSWDEF SKDVSASVLA TYVGGKQLYP
101: WVKEISVDER REALFRASKY ALTRGVTTVI DLGRYFPGTT DELSWKDFQD VYLYADSSKK MMIRTCLFFP ITTWSRLLDL KLQKGSVLSE WLYLGGVKAF
201: IDGSLGSNSA LFYEEYIDTP NNYGLEVMDP EKLSNFTMAA DKSGLQVAIH AIGDKANDMI LDMYESVAAA NGDRDRRFRI EHAQHLAPGS ANRFGQLHIV
301: ASVQPDHLLD DADSVAKKLG SERAVKESYL FQSLLNGNAL LALGSDWPVC FRKSLHIYNV FTYSQTLLRL FSLQVADINP LHSIRTAVKR IPPKWDHAWI
401: PSERISFTDA LIAQTISAAR AAFLDHHLGS LSPGKLADFV ILSTNSWDEF SKDVSASVLA TYVGGKQLYP
Arabidopsis Description
LAF3Amidohydrolase family [Source:UniProtKB/TrEMBL;Acc:A0A1I9LN01]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.