Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT4G31550.1 | CDY57144 | AT3G56800.1 | 15733871 |
| AT4G31550.1 | CDY65072 | AT3G56800.1 | 15733871 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY13441 | Canola | nucleus | 95.77 | 92.83 |
| Bra023998.1-P | Field mustard | nucleus | 96.48 | 83.54 |
| CDY36432 | Canola | nucleus | 75.0 | 75.53 |
| CDY60852 | Canola | nucleus | 79.23 | 75.5 |
| CDY20325 | Canola | nucleus | 72.54 | 72.79 |
| CDX68763 | Canola | nucleus | 75.7 | 72.15 |
| CDY23304 | Canola | nucleus | 77.46 | 71.9 |
| AT4G31550.1 | Thale cress | nucleus | 81.69 | 71.38 |
| CDY45583 | Canola | nucleus | 73.59 | 64.31 |
| GSMUA_Achr5P21910_001 | Banana | nucleus | 52.11 | 58.04 |
| GSMUA_Achr7P15930_001 | Banana | nucleus | 56.69 | 57.09 |
| VIT_11s0052g00450.t01 | Wine grape | nucleus | 48.59 | 56.33 |
| GSMUA_Achr3P05670_001 | Banana | nucleus | 53.87 | 55.43 |
| VIT_04s0069g00920.t01 | Wine grape | nucleus | 65.14 | 54.73 |
| GSMUA_Achr10P... | Banana | nucleus | 50.0 | 53.18 |
| GSMUA_Achr9P22950_001 | Banana | nucleus | 51.41 | 51.96 |
| TraesCS2D01G269200.1 | Wheat | nucleus | 55.99 | 50.8 |
| GSMUA_Achr5P04870_001 | Banana | nucleus | 53.17 | 50.67 |
| Os04t0287400-01 | Rice | nucleus | 58.1 | 50.61 |
| GSMUA_Achr3P00510_001 | Banana | nucleus | 46.83 | 50.38 |
| PGSC0003DMT400075531 | Potato | nucleus | 54.93 | 50.0 |
| TraesCS2A01G270200.2 | Wheat | nucleus | 55.99 | 49.69 |
| GSMUA_Achr4P20600_001 | Banana | nucleus | 49.3 | 49.65 |
| KRH02746 | Soybean | nucleus | 55.63 | 49.38 |
| Os04t0605100-01 | Rice | nucleus | 53.52 | 49.19 |
| Zm00001d002405_P001 | Maize | nucleus | 51.06 | 48.66 |
| GSMUA_Achr6P03810_001 | Banana | nucleus | 44.01 | 48.64 |
| EES11384 | Sorghum | nucleus | 53.52 | 48.25 |
| GSMUA_Achr1P23560_001 | Banana | nucleus | 51.41 | 48.18 |
| KRH19120 | Soybean | nucleus | 54.93 | 48.15 |
| Zm00001d026252_P001 | Maize | nucleus | 53.17 | 47.78 |
| Zm00001d004086_P001 | Maize | nucleus | 55.63 | 47.73 |
| PGSC0003DMT400024632 | Potato | nucleus | 55.28 | 47.01 |
| Solyc08g006320.2.1 | Tomato | nucleus | 53.52 | 46.34 |
| TraesCS2B01G454300.1 | Wheat | nucleus | 51.06 | 46.33 |
| TraesCS2D01G431000.1 | Wheat | nucleus | 51.76 | 45.37 |
| TraesCS2A01G433000.1 | Wheat | nucleus | 51.76 | 44.82 |
| Solyc12g096350.1.1 | Tomato | nucleus | 52.46 | 44.08 |
| TraesCS5D01G071800.1 | Wheat | nucleus | 45.77 | 43.92 |
| TraesCS5B01G375100.1 | Wheat | nucleus | 46.13 | 43.81 |
| TraesCS5A01G060200.1 | Wheat | nucleus | 45.07 | 43.39 |
| TraesCS5D01G382600.1 | Wheat | nucleus | 45.77 | 43.33 |
| TraesCS5B01G067700.1 | Wheat | nucleus | 45.07 | 42.95 |
| GSMUA_Achr3P27880_001 | Banana | nucleus | 41.55 | 42.91 |
| HORVU4Hr1G012580.5 | Barley | nucleus, plastid | 22.89 | 42.48 |
| TraesCS5A01G373100.1 | Wheat | nucleus | 44.01 | 41.95 |
| HORVU5Hr1G092770.2 | Barley | mitochondrion | 43.66 | 41.47 |
| CDX89558 | Canola | nucleus | 41.55 | 39.6 |
| Zm00001d024376_P001 | Maize | nucleus | 43.31 | 39.55 |
| Os08t0235800-00 | Rice | nucleus | 47.89 | 39.53 |
| CDY38936 | Canola | nucleus | 42.25 | 39.47 |
| HORVU5Hr1G015120.1 | Barley | nucleus | 41.9 | 39.4 |
| Os02t0462800-01 | Rice | nucleus | 34.51 | 38.74 |
| EES14755 | Sorghum | nucleus | 42.96 | 38.36 |
| Zm00001d050195_P001 | Maize | nucleus | 41.2 | 38.24 |
| OQU84894 | Sorghum | nucleus | 39.44 | 37.46 |
| CDY03470 | Canola | nucleus | 42.61 | 35.8 |
| CDY50747 | Canola | nucleus | 37.32 | 34.98 |
| HORVU5Hr1G122800.4 | Barley | plastid | 31.34 | 34.5 |
| CDX92626 | Canola | nucleus | 42.25 | 34.48 |
| CDY41890 | Canola | nucleus | 37.68 | 34.19 |
| CDY10996 | Canola | nucleus | 41.55 | 34.01 |
| Zm00001d016457_P001 | Maize | nucleus | 38.73 | 33.85 |
| CDX74175 | Canola | nucleus | 37.68 | 33.33 |
| CDY40667 | Canola | nucleus | 37.32 | 33.33 |
| CDY29658 | Canola | nucleus | 35.92 | 31.68 |
| CDY10749 | Canola | nucleus | 36.62 | 31.14 |
| HORVU5Hr1G052630.2 | Barley | plastid | 27.46 | 30.95 |
| CDX97806 | Canola | nucleus | 35.92 | 30.91 |
| CDY05601 | Canola | nucleus | 36.27 | 30.56 |
| CDY33884 | Canola | nucleus | 36.27 | 30.56 |
| CDY48658 | Canola | nucleus | 36.27 | 30.56 |
| CDX86205 | Canola | nucleus | 36.62 | 30.5 |
| CDX84824 | Canola | nucleus | 36.27 | 30.47 |
| CDY47130 | Canola | nucleus | 36.62 | 30.32 |
| CDY34269 | Canola | nucleus | 42.61 | 30.17 |
| CDY23988 | Canola | nucleus | 35.21 | 29.41 |
| HORVU3Hr1G097420.1 | Barley | nucleus | 29.93 | 26.65 |
| CDX71933 | Canola | nucleus | 17.96 | 25.63 |
| HORVU3Hr1G039500.1 | Barley | plastid | 27.46 | 24.61 |
| CDY07185 | Canola | nucleus | 21.83 | 21.23 |
| CDY48511 | Canola | nucleus | 21.83 | 20.81 |
| CDY69417 | Canola | nucleus | 16.9 | 20.78 |
| CDY01962 | Canola | nucleus | 20.77 | 20.27 |
| CDX90180 | Canola | nucleus | 18.31 | 19.92 |
| CDX99806 | Canola | nucleus | 17.96 | 19.54 |
| CDY49246 | Canola | nucleus | 18.31 | 19.19 |
| CDY50779 | Canola | nucleus | 17.61 | 19.08 |
| CDY10943 | Canola | nucleus | 20.07 | 19.06 |
| CDX94201 | Canola | nucleus | 19.72 | 18.73 |
| CDX89000 | Canola | nucleus | 18.31 | 18.64 |
| CDY00583 | Canola | nucleus | 18.31 | 18.64 |
| CDY59336 | Canola | nucleus | 19.37 | 18.58 |
| CDX76334 | Canola | nucleus | 20.07 | 18.51 |
| CDY41375 | Canola | nucleus | 20.07 | 18.51 |
| CDY44115 | Canola | nucleus | 18.66 | 17.91 |
| CDY27045 | Canola | nucleus | 21.48 | 17.73 |
| CDX96157 | Canola | nucleus | 21.13 | 17.24 |
| CDY52525 | Canola | nucleus | 23.24 | 15.83 |
| CDX77581 | Canola | nucleus | 20.77 | 15.61 |
| CDX98217 | Canola | nucleus | 20.77 | 15.32 |
| CDY09551 | Canola | nucleus | 21.83 | 15.01 |
| CDY43651 | Canola | nucleus | 21.83 | 14.9 |
| CDY72268 | Canola | cytosol, plastid | 1.06 | 2.91 |
Protein Annotations
| MapMan:15.5.22 | Gene3D:2.20.25.80 | GO:A0A078C642 | EnsemblPlants:CDX72310 | ProteinID:CDX72310 | ProteinID:CDX72310.1 |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0006139 |
| GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0043565 |
| EnsemblPlantsGene:GSBRNA2T00099796001 | InterPro:IPR003657 | InterPro:IPR036576 | PFAM:PF03106 | PFAM:PF10533 | PFscan:PS50811 |
| PANTHER:PTHR31282 | PANTHER:PTHR31282:SF15 | SMART:SM00774 | SUPFAM:SSF118290 | UniParc:UPI0004EDE768 | InterPro:WRKY_dom |
| InterPro:WRKY_dom_sf | InterPro:Zn-cluster-dom | SEG:seg | : | : | : |
Description
BnaC07g43320D
Coordinates
chrLK031796:-:626942..628462
Molecular Weight (calculated)
31493.2 Da
IEP (calculated)
9.694
GRAVY (calculated)
-0.652
Length
284 amino acids
Sequence
(BLAST)
(BLAST)
001: MAVDLMRFPK MDDQKAIQEA ASQGLQSMEH LIRVLSTNPP ERNNNVDCSE ITDFTVSKFK TVISLLNRTG HARFRRGPVA SPQKHQSQIA KPEAAPVVVS
101: QPQPSITLDF TKPTMDFAKE NFSVSLNSSY MSSAITGDGS VSKGSSIFLA SQPVNSSEHE HSENFSGKIS GSGHGKCHCK KSRKNKVKRT IRVPAISSKI
201: ADIPPDEYSW RKYGQKPIKG SPHPRGYYKC STFKECPARK HVERALDDPS MLIVTYEWEH DHNPSAMQQN VSSPGVNDFV FNSA
101: QPQPSITLDF TKPTMDFAKE NFSVSLNSSY MSSAITGDGS VSKGSSIFLA SQPVNSSEHE HSENFSGKIS GSGHGKCHCK KSRKNKVKRT IRVPAISSKI
201: ADIPPDEYSW RKYGQKPIKG SPHPRGYYKC STFKECPARK HVERALDDPS MLIVTYEWEH DHNPSAMQQN VSSPGVNDFV FNSA
001: MAVDLMRFPK IDDQTAIQEA ASQGLQSMEH LIRVLSNRPE QQHNVDCSEI TDFTVSKFKT VISLLNRTGH ARFRRGPVHS TSSAASQKLQ SQIVKNTQPE
101: APIVRTTTNH PQIVPPPSSV TLDFSKPSIF GTKAKSAELE FSKENFSVSL NSSFMSSAIT GDGSVSNGKI FLASAPLQPV NSSGKPPLAG HPYRKRCLEH
201: EHSESFSGKV SGSAYGKCHC KKSRKNRMKR TVRVPAISAK IADIPPDEYS WRKYGQKPIK GSPHPRGYYK CSTFRGCPAR KHVERALDDP AMLIVTYEGE
301: HRHNQSAMQE NISSSGINDL VFASA
101: APIVRTTTNH PQIVPPPSSV TLDFSKPSIF GTKAKSAELE FSKENFSVSL NSSFMSSAIT GDGSVSNGKI FLASAPLQPV NSSGKPPLAG HPYRKRCLEH
201: EHSESFSGKV SGSAYGKCHC KKSRKNRMKR TVRVPAISAK IADIPPDEYS WRKYGQKPIK GSPHPRGYYK CSTFRGCPAR KHVERALDDP AMLIVTYEGE
301: HRHNQSAMQE NISSSGINDL VFASA
Arabidopsis Description
WRKY11Probable WRKY transcription factor 11 [Source:UniProtKB/Swiss-Prot;Acc:Q9SV15]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.