Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra022612.1-P | Field mustard | nucleus | 96.84 | 97.97 |
| CDY27045 | Canola | nucleus | 96.55 | 97.67 |
| AT5G52830.1 | Thale cress | nucleus | 81.03 | 81.03 |
| KRH35230 | Soybean | nucleus | 35.92 | 42.09 |
| KRG91594 | Soybean | nucleus | 37.36 | 40.5 |
| CDY01962 | Canola | nucleus | 31.9 | 38.14 |
| VIT_16s0050g01480.t01 | Wine grape | mitochondrion | 19.83 | 37.91 |
| CDY07185 | Canola | nucleus | 31.32 | 37.33 |
| KRH08822 | Soybean | nucleus, plastid | 27.3 | 36.97 |
| CDY48511 | Canola | nucleus | 31.32 | 36.58 |
| KRH38335 | Soybean | nucleus | 36.49 | 34.14 |
| Zm00001d037054_P001 | Maize | nucleus | 23.85 | 33.07 |
| CDY44115 | Canola | nucleus | 27.59 | 32.43 |
| CDY10943 | Canola | nucleus | 27.3 | 31.77 |
| CDX94201 | Canola | nucleus | 27.01 | 31.44 |
| CDY59336 | Canola | nucleus | 26.72 | 31.42 |
| CDX76334 | Canola | nucleus | 27.01 | 30.52 |
| CDY41375 | Canola | nucleus | 27.01 | 30.52 |
| Os02t0265200-01 | Rice | nucleus | 31.61 | 30.47 |
| KRH08826 | Soybean | nucleus | 35.63 | 30.39 |
| Zm00001d053369_P001 | Maize | nucleus | 32.18 | 30.35 |
| EES04883 | Sorghum | nucleus | 32.18 | 29.87 |
| Zm00001d016052_P001 | Maize | nucleus | 32.76 | 29.77 |
| CDX71933 | Canola | nucleus | 16.95 | 29.65 |
| CDY69417 | Canola | nucleus | 19.25 | 29.0 |
| Zm00001d008578_P001 | Maize | nucleus | 27.01 | 27.57 |
| EER89819 | Sorghum | nucleus | 26.72 | 26.57 |
| TraesCS7B01G240000.1 | Wheat | nucleus | 27.01 | 26.55 |
| TraesCS7A01G343000.2 | Wheat | nucleus | 26.72 | 26.12 |
| TraesCS7D01G336400.1 | Wheat | nucleus | 26.44 | 25.84 |
| CDX90180 | Canola | nucleus | 19.25 | 25.67 |
| CDX89000 | Canola | nucleus | 19.54 | 24.37 |
| CDY00583 | Canola | nucleus | 19.54 | 24.37 |
| CDX99806 | Canola | nucleus | 18.1 | 24.14 |
| CDY50779 | Canola | nucleus | 17.82 | 23.66 |
| CDY49246 | Canola | nucleus | 18.39 | 23.62 |
| Os06t0504900-00 | Rice | nucleus | 25.86 | 23.32 |
| HORVU7Hr1G080950.1 | Barley | nucleus, plastid | 26.44 | 22.6 |
| CDX68763 | Canola | nucleus | 18.1 | 21.14 |
| CDY60852 | Canola | nucleus | 18.1 | 21.14 |
| CDX72310 | Canola | nucleus | 17.24 | 21.13 |
| CDY36432 | Canola | nucleus | 16.95 | 20.92 |
| CDX77581 | Canola | nucleus | 22.7 | 20.9 |
| CDY23304 | Canola | nucleus | 18.1 | 20.59 |
| CDY13441 | Canola | nucleus | 17.24 | 20.48 |
| CDX98217 | Canola | nucleus | 22.41 | 20.26 |
| CDY52525 | Canola | nucleus | 24.14 | 20.14 |
| CDY20325 | Canola | nucleus | 16.09 | 19.79 |
| CDY09551 | Canola | nucleus | 23.28 | 19.61 |
| CDY43651 | Canola | nucleus | 23.28 | 19.47 |
| CDY72268 | Canola | cytosol, plastid | 5.75 | 19.42 |
| CDY50747 | Canola | nucleus | 16.38 | 18.81 |
| CDY41890 | Canola | nucleus | 16.38 | 18.21 |
| CDY45583 | Canola | nucleus | 16.95 | 18.15 |
| CDY29658 | Canola | nucleus | 16.67 | 18.01 |
| CDY40667 | Canola | nucleus | 16.38 | 17.92 |
| CDX97806 | Canola | nucleus | 16.95 | 17.88 |
| CDX74175 | Canola | nucleus | 16.38 | 17.76 |
| CDY10749 | Canola | nucleus | 16.95 | 17.66 |
| CDY23988 | Canola | nucleus | 17.24 | 17.65 |
| CDX84824 | Canola | nucleus | 16.95 | 17.46 |
| CDY03470 | Canola | nucleus | 16.95 | 17.46 |
| CDX86205 | Canola | nucleus | 16.95 | 17.3 |
| CDY48658 | Canola | nucleus | 16.67 | 17.21 |
| CDY05601 | Canola | nucleus | 16.67 | 17.21 |
| CDY47130 | Canola | nucleus | 16.95 | 17.2 |
| CDX89558 | Canola | nucleus | 14.66 | 17.11 |
| CDY33884 | Canola | nucleus | 16.38 | 16.91 |
| CDY38936 | Canola | nucleus | 14.66 | 16.78 |
| CDY10996 | Canola | nucleus | 15.8 | 15.85 |
| CDX92626 | Canola | nucleus | 15.8 | 15.8 |
| CDY34269 | Canola | nucleus | 16.67 | 14.46 |
Protein Annotations
| MapMan:15.5.22 | Gene3D:2.20.25.80 | GO:A0A078E4W0 | EnsemblPlants:CDX96157 | ProteinID:CDX96157 | ProteinID:CDX96157.1 |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0006139 |
| GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0043565 |
| EnsemblPlantsGene:GSBRNA2T00102220001 | InterPro:IPR003657 | InterPro:IPR036576 | PFAM:PF03106 | PFscan:PS50811 | PANTHER:PTHR32096 |
| PANTHER:PTHR32096:SF22 | SMART:SM00774 | SUPFAM:SSF118290 | UniParc:UPI0004EE12D0 | InterPro:WRKY_dom | InterPro:WRKY_dom_sf |
| SEG:seg | : | : | : | : | : |
Description
BnaC02g14940D
Coordinates
chrLK031893:+:85272..86739
Molecular Weight (calculated)
38419.4 Da
IEP (calculated)
5.843
GRAVY (calculated)
-0.880
Length
348 amino acids
Sequence
(BLAST)
(BLAST)
001: MSEDWDLFAV VRSCSSSVSA ATINTNSRGG AEGGANCKQQ DRPPLFQHIH GDISRESSSC NELQDSCKPF LPVTTTWSSP LPPPPPPPPP VVSSAPNILM
101: KQEQGLIESQ DQKPPLGARV FPPPTTISSS SSVFVFRGQR DHLLQQQPQA PLRSRKRKNQ QKRTICHVTQ ENLSSDMWAW RKYGQKPIKG SPYPRNYYRC
201: SSSKGCLARK QVERSNLDPN IFIVTYTGEH THPRPTHRNS LAGSTRNKSQ PVNPPPKPDH PSGQTVSGVK EEIHLSPTTP LKENDDVQGT NGEEVVNMED
301: EELDEEEDDD DDVDDLLIPN FSVRDRDDLF FAGNFPSWSA GSAGDGGG
101: KQEQGLIESQ DQKPPLGARV FPPPTTISSS SSVFVFRGQR DHLLQQQPQA PLRSRKRKNQ QKRTICHVTQ ENLSSDMWAW RKYGQKPIKG SPYPRNYYRC
201: SSSKGCLARK QVERSNLDPN IFIVTYTGEH THPRPTHRNS LAGSTRNKSQ PVNPPPKPDH PSGQTVSGVK EEIHLSPTTP LKENDDVQGT NGEEVVNMED
301: EELDEEEDDD DDVDDLLIPN FSVRDRDDLF FAGNFPSWSA GSAGDGGG
001: MSSEDWDLFA VVRSCSSSVS TTNSCAGHED DIGNCKQQQD PPPPPLFQAS SSCNELQDSC KPFLPVTTTT TTTWSPPPLL PPPKASSPSP NILLKQEQVL
101: LESQDQKPPL SVRVFPPSTS SSVFVFRGQR DQLLQQQSQP PLRSRKRKNQ QKRTICHVTQ ENLSSDLWAW RKYGQKPIKG SPYPRNYYRC SSSKGCLARK
201: QVERSNLDPN IFIVTYTGEH THPRPTHRNS LAGSTRNKSQ PVNPVPKPDT SPLSDTVKEE IHLSPTTPLK GNDDVQETNG DEDMVGQEVN MEEEEEEEEV
301: EEDDEEEEDD DDVDDLLIPN LAVRDRDDLF FAGSFPSWSA GSAGDGGG
101: LESQDQKPPL SVRVFPPSTS SSVFVFRGQR DQLLQQQSQP PLRSRKRKNQ QKRTICHVTQ ENLSSDLWAW RKYGQKPIKG SPYPRNYYRC SSSKGCLARK
201: QVERSNLDPN IFIVTYTGEH THPRPTHRNS LAGSTRNKSQ PVNPVPKPDT SPLSDTVKEE IHLSPTTPLK GNDDVQETNG DEDMVGQEVN MEEEEEEEEV
301: EEDDEEEEDD DDVDDLLIPN LAVRDRDDLF FAGSFPSWSA GSAGDGGG
Arabidopsis Description
WRKY27Probable WRKY transcription factor 27 [Source:UniProtKB/Swiss-Prot;Acc:Q9FLX8]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.