CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d037054_P001	Maize	nucleus	57.43	80.08
Zm00001d008578_P001	Maize	nucleus	69.71	71.55
TraesCS7B01G240000.1	Wheat	nucleus	38.86	38.42
TraesCS7A01G343000.2	Wheat	nucleus	38.29	37.64
TraesCS7D01G336400.1	Wheat	nucleus	38.0	37.36
VIT_16s0050g01480.t01	Wine grape	mitochondrion	17.43	33.52
Os06t0504900-00	Rice	nucleus	36.86	33.42
HORVU7Hr1G080950.1	Barley	nucleus, plastid	37.71	32.43
KRH27887	Soybean	nucleus	19.43	31.78
EES04883	Sorghum	nucleus	32.0	29.87
KRH59972	Soybean	nucleus	23.71	28.82
KRH41244	Soybean	nucleus	23.14	27.74
KRH08822	Soybean	nucleus, plastid	20.29	27.63
CDY27045	Canola	nucleus	26.57	27.03
Bra022612.1-P	Field mustard	nucleus	26.57	27.03
KRH77587	Soybean	nucleus	18.86	26.94
CDX96157	Canola	nucleus	26.57	26.72
CDY44115	Canola	nucleus	22.57	26.69
VIT_02s0025g00420.t01	Wine grape	nucleus	24.86	26.44
Bra013708.1-P	Field mustard	nucleus	22.29	26.35
KRH35230	Soybean	nucleus	22.29	26.26
AT5G52830.1	Thale cress	nucleus	26.0	26.15
CDY59336	Canola	nucleus	22.0	26.01
Bra020814.1-P	Field mustard	nucleus	22.86	25.97
CDX76334	Canola	nucleus	22.86	25.97
Bra019297.1-P	Field mustard	nucleus	21.71	25.42
CDY10943	Canola	nucleus	21.71	25.42
CDX94201	Canola	nucleus	21.71	25.42
CDY41375	Canola	nucleus	22.0	25.0
KRG91594	Soybean	nucleus	22.86	24.92
KXG22622	Sorghum	nucleus	25.71	24.73
AT4G23550.1	Thale cress	nucleus	21.71	24.52
PGSC0003DMT400032091	Potato	nucleus	20.57	23.45
Solyc08g081610.2.1	Tomato	nucleus	20.29	23.43
EES03310	Sorghum	nucleus, plastid	26.57	22.52
KRH38335	Soybean	nucleus	23.14	21.77
EES03611	Sorghum	nucleus	18.86	21.29
KRH08826	Soybean	nucleus	24.0	20.59
KXG37092	Sorghum	nucleus	22.57	20.15
EES03563	Sorghum	plastid	18.0	19.75
OQU92055	Sorghum	nucleus	23.43	19.2
EES11384	Sorghum	nucleus	16.57	18.41
OQU84894	Sorghum	nucleus	15.71	18.39
KXG27029	Sorghum	nucleus	26.29	18.22
EES07413	Sorghum	nucleus	25.71	18.11
EES14755	Sorghum	nucleus	16.29	17.92
EER91209	Sorghum	nucleus	16.57	16.48
EES17321	Sorghum	nucleus	16.29	15.36
KXG37354	Sorghum	nucleus	17.71	14.29
EER93478	Sorghum	nucleus	16.0	13.79

Protein Annotations

MapMan:15.5.22	Gene3D:2.20.25.80	EntrezGene:8058817	UniProt:C5Z3H5	EnsemblPlants:EER89819	ProteinID:EER89819
ProteinID:EER89819.1	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351
GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0043565
InterPro:IPR003657	InterPro:IPR036576	PFAM:PF03106	PFscan:PS50811	PANTHER:PTHR32096	PANTHER:PTHR32096:SF35
SMART:SM00774	EnsemblPlantsGene:SORBI_3010G148800	SUPFAM:SSF118290	UniParc:UPI0001A89745	InterPro:WRKY_dom	InterPro:WRKY_dom_sf
RefSeq:XP_002438452.1	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr10:-:42829856..42831874

Molecular Weight (calculated)

37439.5 Da

IEP (calculated)

7.726

GRAVY (calculated)

-0.683

Length

350 amino acids

Sequence
(BLAST)

001: MEGDLRWCCG SSSNDWDLHA VVRLASCSGG SRSRVTSPSP WASDESFSCL PPPPQSQKDE VTTDAAALQQ PLISPAVDDL CGLQQAFLAA TPQPRSEAPP
101: PQPPAKPRTS YRNNDGGVGG GPTRSKRKKK KSQVTSKEVT RVPVGTSADP WAWRKYGQKP IKGSPYPRGY YRCSTDKDCR ARKQVERCRT DASTLIVSYT
201: GEHSHPVPLH RNALAGTTRN KPQPAPSTSP AEQPPAASPI VGVEYEEDDT VAASVLLEDA ETEGEEDVLS LFLELAPSPS NGSGSKDVMV STELHNGRGS
301: QKVVALSKLH EFRHPATTSS SRTSDGLGAA PAAMNVTHEN CPFSGLRLTT

Best Arabidopsis Sequence Match ( AT4G01250.1 )
(BLAST)

001: MADDWDLHAV VRGCSAVSSS ATTTVYSPGV SSHTNPIFTV GRQSNAVSFG EIRDLYTPFT QESVVSSFSC INYPEEPRKP QNQKRPLSLS ASSGSVTSKP
101: SGSNTSRSKR RKIQHKKVCH VAAEALNSDV WAWRKYGQKP IKGSPYPRGY YRCSTSKGCL ARKQVERNRS DPKMFIVTYT AEHNHPAPTH RNSLAGSTRQ
201: KPSDQQTSKS PTTTIATYSS SPVTSADEFV LPVEDHLAVG DLDGEEDLLS LSDTVVSDDF FDGLEEFAAG DSFSGNSAPA SFDLSWVVNS AATTTGGI

Arabidopsis Description

WRKY22WRKY transcription factor 22 [Source:UniProtKB/Swiss-Prot;Acc:O04609]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.