CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
mitochondrion 2
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus, plastid
BaCelLo:	nucleus
iPSORT:	mitochondrion
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d009698_P001	Maize	nucleus	64.29	67.44
HORVU1Hr1G092360.1	Barley	nucleus	36.54	49.63
TraesCS1B01G455000.1	Wheat	nucleus	40.38	49.16
TraesCS1D01G431600.1	Wheat	nucleus	39.56	48.81
HORVU4Hr1G082550.2	Barley	nucleus	28.57	42.28
TraesCS4D01G320200.1	Wheat	nucleus	31.32	40.71
TraesCS5A01G495800.1	Wheat	nucleus	32.69	40.34
TraesCS4D01G320000.1	Wheat	nucleus	32.42	39.6
EES03310	Sorghum	nucleus, plastid	42.31	37.29
GSMUA_Achr5P09430_001	Banana	nucleus	25.27	27.06
EES04883	Sorghum	nucleus	27.2	26.4
GSMUA_Achr9P05460_001	Banana	nucleus	26.1	26.1
EER89819	Sorghum	nucleus	24.73	25.71
GSMUA_Achr6P31840_001	Banana	nucleus	26.37	24.94
GSMUA_Achr1P05010_001	Banana	nucleus	25.0	24.66
EES03611	Sorghum	nucleus	18.96	22.26
EES03563	Sorghum	plastid	18.96	21.63
OQU92055	Sorghum	nucleus	24.45	20.84
KXG37092	Sorghum	nucleus	21.98	20.41
EES14755	Sorghum	nucleus	17.58	20.13
EES11384	Sorghum	nucleus	17.03	19.68
CDY72268	Canola	cytosol, plastid	5.22	18.45
OQU84894	Sorghum	nucleus	14.84	18.06
KXG27029	Sorghum	nucleus	24.45	17.62
EES07413	Sorghum	nucleus	23.35	17.1
EER91209	Sorghum	nucleus	15.66	16.19
EES17321	Sorghum	nucleus	15.93	15.63
KXG37354	Sorghum	nucleus	16.48	13.82
EER93478	Sorghum	nucleus	15.38	13.79

Protein Annotations

MapMan:15.5.22	Gene3D:2.20.25.80	UniProt:A0A1B6PAC4	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0003700	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	GO:GO:0043565	InterPro:IPR003657	InterPro:IPR036576	EnsemblPlants:KXG22622	ProteinID:KXG22622
ProteinID:KXG22622.1	PFAM:PF03106	PFscan:PS50811	PANTHER:PTHR32096	PANTHER:PTHR32096:SF23	SMART:SM00774
EnsemblPlantsGene:SORBI_3009G247700	SUPFAM:SSF118290	UniParc:UPI00081AB5EB	InterPro:WRKY_dom	InterPro:WRKY_dom_sf	SEG:seg

Description

hypothetical protein

Coordinates

chr9:+:58309106..58310986

Molecular Weight (calculated)

38898.4 Da

IEP (calculated)

6.505

GRAVY (calculated)

-0.511

Length

364 amino acids

Sequence
(BLAST)

001: MPKSTVSVYM NPLPVSPHLG THTHARSIAM DCSNDWDLQA LVRSCGGGGT AAAAACNSGA APTATRGGYD APSREAADDA SVVVGGGGRV VATAAAGQEF
101: LGQPVAAWRR NLDYLDLVDH ELLRMPFSIT PSSSRETTSG GAPGQQMIRQ PRRQPGRKPG VRTPRAKRSK KRQVKKVVCE VPAAGGGVSS DLWAWRKYGQ
201: KPIKGSPYPR GYYKCSSLKS CMARKLVERS PAKPGVLVVT YIADHCHAVP TMLNALAGTT RNRPAAESPD DGDHHHHQEH HDHETSDGAP AASADNKLDD
301: DGADAASTMT VEENDAWLVD HMALEDDVVD GDCPFDDFLW PFDDDLDQFL DVDGGGVLGR RLSL

Best Arabidopsis Sequence Match ( AT4G01250.1 )
(BLAST)

001: MADDWDLHAV VRGCSAVSSS ATTTVYSPGV SSHTNPIFTV GRQSNAVSFG EIRDLYTPFT QESVVSSFSC INYPEEPRKP QNQKRPLSLS ASSGSVTSKP
101: SGSNTSRSKR RKIQHKKVCH VAAEALNSDV WAWRKYGQKP IKGSPYPRGY YRCSTSKGCL ARKQVERNRS DPKMFIVTYT AEHNHPAPTH RNSLAGSTRQ
201: KPSDQQTSKS PTTTIATYSS SPVTSADEFV LPVEDHLAVG DLDGEEDLLS LSDTVVSDDF FDGLEEFAAG DSFSGNSAPA SFDLSWVVNS AATTTGGI

Arabidopsis Description

WRKY22WRKY transcription factor 22 [Source:UniProtKB/Swiss-Prot;Acc:O04609]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.