Factsheet for TraesCS4D01G320000.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4D01G320200.1	Wheat	nucleus	77.18	82.14
TraesCS5A01G495800.1	Wheat	nucleus	77.52	78.31
HORVU4Hr1G082550.2	Barley	nucleus	59.73	72.36
TraesCS1D01G431600.1	Wheat	nucleus	49.66	50.17
TraesCS3D01G227400.1	Wheat	nucleus	38.93	36.25
Zm00001d009698_P001	Maize	nucleus	40.27	34.58
KXG22622	Sorghum	nucleus	39.6	32.42
TraesCS3D01G289500.1	Wheat	nucleus	20.81	22.06
GSMUA_Achr5P09430_001	Banana	nucleus	23.49	20.59
GSMUA_Achr9P05460_001	Banana	nucleus	24.5	20.05
TraesCS1D01G200900.1	Wheat	nucleus	22.82	20.0
GSMUA_Achr1P05010_001	Banana	nucleus	24.5	19.78
TraesCS3D01G281900.1	Wheat	nucleus, plastid	19.46	19.46
GSMUA_Achr6P31840_001	Banana	nucleus	24.83	19.22
TraesCS7D01G336400.1	Wheat	nucleus	22.82	19.1
TraesCS2D01G269200.1	Wheat	nucleus	18.46	17.57
TraesCS5D01G382600.1	Wheat	nucleus	17.45	17.33
TraesCS5D01G564500.2	Wheat	nucleus	21.14	17.21
TraesCS2D01G431000.1	Wheat	nucleus	18.46	16.98
TraesCS5D01G071800.1	Wheat	nucleus	16.44	16.55
CDY72268	Canola	cytosol, plastid	5.03	14.56
TraesCS2D01G443000.1	Wheat	nucleus	24.83	14.54
TraesCS6D01G247200.1	Wheat	nucleus	23.15	14.35
TraesCS4D01G068200.1	Wheat	nucleus	16.11	14.08
TraesCS5D01G070700.1	Wheat	nucleus	16.11	13.48
TraesCS5D01G390800.1	Wheat	nucleus	17.11	12.94
TraesCS5D01G451000.1	Wheat	nucleus	16.78	10.39

Protein Annotations

MapMan:15.5.22	Gene3D:2.20.25.80	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700
GO:GO:0005488	GO:GO:0006139	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	GO:GO:0043565	InterPro:IPR003657	InterPro:IPR036576	PFAM:PF03106	PFscan:PS50811
PANTHER:PTHR32096	PANTHER:PTHR32096:SF23	SMART:SM00774	SUPFAM:SSF118290	EnsemblPlantsGene:TraesCS4D01G320000	EnsemblPlants:TraesCS4D01G320000.1
InterPro:WRKY_dom	InterPro:WRKY_dom_sf	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr4D:+:483453246..483456417

Molecular Weight (calculated)

32278.4 Da

IEP (calculated)

10.017

GRAVY (calculated)

-0.400

Length

298 amino acids

Sequence
(BLAST)

001: MDSADWGLEA VVRSCGGSTL APGSEAEPEG TAARVRREVT AGVEFVGQRM KPASSWSLYD GLERPRAPFS ITPSSTSRER NVLISFSTFG QTLPGRKQAG
101: RKPGVGTPTP RRRKTSKKKV VRLAPAAHGG VNNGTVDDLW AWRKYGQKPI KASPFPRACY KCSSLRACTA RKLVDRSPAK PEVLIVTYIE DHCHAVPVPI
201: NALAGTAHHP PKSPRGTTTS GEAVSARREV DNADVPPCIA EELADDKSKL RAPVGLDDFY GSFDNTVFSR TWATGFFPVV CGADLHKKIG IVYYYLPL

Best Arabidopsis Sequence Match ( AT4G01250.1 )
(BLAST)

001: MADDWDLHAV VRGCSAVSSS ATTTVYSPGV SSHTNPIFTV GRQSNAVSFG EIRDLYTPFT QESVVSSFSC INYPEEPRKP QNQKRPLSLS ASSGSVTSKP
101: SGSNTSRSKR RKIQHKKVCH VAAEALNSDV WAWRKYGQKP IKGSPYPRGY YRCSTSKGCL ARKQVERNRS DPKMFIVTYT AEHNHPAPTH RNSLAGSTRQ
201: KPSDQQTSKS PTTTIATYSS SPVTSADEFV LPVEDHLAVG DLDGEEDLLS LSDTVVSDDF FDGLEEFAAG DSFSGNSAPA SFDLSWVVNS AATTTGGI

Arabidopsis Description

WRKY22WRKY transcription factor 22 [Source:UniProtKB/Swiss-Prot;Acc:O04609]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.