Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 2
- mitochondrion 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2B01G454300.1 | Wheat | nucleus | 95.68 | 99.04 |
| TraesCS2A01G433000.1 | Wheat | nucleus | 98.77 | 97.56 |
| Zm00001d002405_P001 | Maize | nucleus | 76.85 | 83.56 |
| HORVU4Hr1G012580.5 | Barley | nucleus, plastid | 39.2 | 83.01 |
| EES11384 | Sorghum | nucleus | 80.25 | 82.54 |
| Os04t0605100-01 | Rice | nucleus | 77.16 | 80.91 |
| Zm00001d026252_P001 | Maize | nucleus | 76.85 | 78.8 |
| HORVU5Hr1G122800.4 | Barley | plastid | 57.1 | 71.71 |
| TraesCS5D01G382600.1 | Wheat | nucleus | 58.02 | 62.67 |
| TraesCS5D01G071800.1 | Wheat | nucleus | 56.48 | 61.82 |
| HORVU5Hr1G052630.2 | Barley | plastid | 47.53 | 61.11 |
| CDY20325 | Canola | nucleus | 47.22 | 54.06 |
| CDY60852 | Canola | nucleus | 48.77 | 53.02 |
| CDX68763 | Canola | nucleus | 48.46 | 52.68 |
| CDX72310 | Canola | nucleus | 45.37 | 51.76 |
| TraesCS2D01G269200.1 | Wheat | nucleus | 49.69 | 51.44 |
| CDY23304 | Canola | nucleus | 48.46 | 51.31 |
| KRH16144 | Soybean | nucleus | 50.0 | 51.27 |
| CDY36432 | Canola | nucleus | 44.44 | 51.06 |
| KRH52606 | Soybean | nucleus | 47.22 | 51.0 |
| GSMUA_Achr6P03810_001 | Banana | nucleus | 40.43 | 50.97 |
| VIT_04s0069g00920.t01 | Wine grape | nucleus | 53.09 | 50.89 |
| KRH37367 | Soybean | nucleus | 46.3 | 50.68 |
| KRH61946 | Soybean | nucleus, plastid | 43.52 | 50.54 |
| CDY13441 | Canola | nucleus | 45.68 | 50.51 |
| Bra011282.1-P | Field mustard | nucleus | 49.69 | 50.0 |
| AT4G31550.1 | Thale cress | nucleus | 50.0 | 49.85 |
| CDY45583 | Canola | nucleus | 50.0 | 49.85 |
| AT2G24570.1 | Thale cress | nucleus | 49.38 | 49.84 |
| KRH04945 | Soybean | nucleus | 48.46 | 49.68 |
| HORVU3Hr1G039500.1 | Barley | plastid | 48.46 | 49.53 |
| KRH12362 | Soybean | nucleus | 44.75 | 49.49 |
| Bra032084.1-P | Field mustard | nucleus | 48.77 | 48.62 |
| Bra023998.1-P | Field mustard | nucleus | 49.07 | 48.48 |
| Bra010231.1-P | Field mustard | nucleus | 49.38 | 48.19 |
| PGSC0003DMT400024632 | Potato | nucleus | 48.15 | 46.71 |
| Solyc08g006320.2.1 | Tomato | nucleus | 47.22 | 46.65 |
| PGSC0003DMT400075531 | Potato | nucleus | 44.44 | 46.15 |
| Solyc12g096350.1.1 | Tomato | nucleus | 41.98 | 40.24 |
| TraesCS5D01G070700.1 | Wheat | nucleus | 36.42 | 33.15 |
| TraesCS4D01G068200.1 | Wheat | nucleus | 34.88 | 33.14 |
| TraesCS5D01G390800.1 | Wheat | nucleus | 33.33 | 27.41 |
| TraesCS1D01G431600.1 | Wheat | nucleus | 19.75 | 21.69 |
| TraesCS5D01G451000.1 | Wheat | nucleus | 31.48 | 21.21 |
| TraesCS4D01G320200.1 | Wheat | nucleus | 17.9 | 20.71 |
| TraesCS3D01G289500.1 | Wheat | nucleus | 17.28 | 19.93 |
| TraesCS3D01G227400.1 | Wheat | nucleus | 18.83 | 19.06 |
| TraesCS1D01G200900.1 | Wheat | nucleus | 19.44 | 18.53 |
| TraesCS4D01G320000.1 | Wheat | nucleus | 16.98 | 18.46 |
| TraesCS5D01G564500.2 | Wheat | nucleus | 19.44 | 17.21 |
| TraesCS3D01G281900.1 | Wheat | nucleus, plastid | 15.74 | 17.11 |
| TraesCS7D01G336400.1 | Wheat | nucleus | 18.52 | 16.85 |
| TraesCS6D01G247200.1 | Wheat | nucleus | 21.91 | 14.76 |
| TraesCS2D01G443000.1 | Wheat | nucleus | 21.6 | 13.75 |
Protein Annotations
| MapMan:15.5.22 | Gene3D:2.20.25.80 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 |
| GO:GO:0005488 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009987 | GO:GO:0043565 | InterPro:IPR003657 | InterPro:IPR036576 | PFAM:PF03106 | PFAM:PF10533 |
| PFscan:PS50811 | PANTHER:PTHR31282 | PANTHER:PTHR31282:SF32 | SMART:SM00774 | SUPFAM:SSF118290 | EnsemblPlantsGene:TraesCS2D01G431000 |
| EnsemblPlants:TraesCS2D01G431000.1 | InterPro:WRKY_dom | InterPro:WRKY_dom_sf | InterPro:Zn-cluster-dom | SEG:seg | : |
Description
No Description!
Coordinates
chr2D:-:543429053..543430122
Molecular Weight (calculated)
34235.3 Da
IEP (calculated)
10.667
GRAVY (calculated)
-0.398
Length
324 amino acids
Sequence
(BLAST)
(BLAST)
001: MAVDLMGCYT PRRADDQLAI QEAATAGLRS LELLVSSLSG AAPSKAPQQH QQQPFGEIAD QAVSKFRKVI SILDRTGHAR FRRGPVQSPP PPPPPAPVAP
101: PPPPPRPLAV EPARPAPLTV VAPVSVAAPV PQPQSLTLDF TKPNLTMSGA TSVTSTSFFS SVTAGEGSVS KGRSLVSAGK PPLSGHKRKP CAGAHSEANT
201: TGSRCHCSKR RKNRVKTTVR VPAVSAKIAD IPPDEYSWRK YGQKPIKGSP YPRGYYKCST VRGCPARKHV ERALDDPAML VVTYEGEHRH SPGPMPMQMA
301: PSPMPMPMGA PVAVASVSAG NGHV
101: PPPPPRPLAV EPARPAPLTV VAPVSVAAPV PQPQSLTLDF TKPNLTMSGA TSVTSTSFFS SVTAGEGSVS KGRSLVSAGK PPLSGHKRKP CAGAHSEANT
201: TGSRCHCSKR RKNRVKTTVR VPAVSAKIAD IPPDEYSWRK YGQKPIKGSP YPRGYYKCST VRGCPARKHV ERALDDPAML VVTYEGEHRH SPGPMPMQMA
301: PSPMPMPMGA PVAVASVSAG NGHV
001: MAVDLMRFPK IDDQTAIQEA ASQGLQSMEH LIRVLSNRPE QQHNVDCSEI TDFTVSKFKT VISLLNRTGH ARFRRGPVHS TSSAASQKLQ SQIVKNTQPE
101: APIVRTTTNH PQIVPPPSSV TLDFSKPSIF GTKAKSAELE FSKENFSVSL NSSFMSSAIT GDGSVSNGKI FLASAPLQPV NSSGKPPLAG HPYRKRCLEH
201: EHSESFSGKV SGSAYGKCHC KKSRKNRMKR TVRVPAISAK IADIPPDEYS WRKYGQKPIK GSPHPRGYYK CSTFRGCPAR KHVERALDDP AMLIVTYEGE
301: HRHNQSAMQE NISSSGINDL VFASA
101: APIVRTTTNH PQIVPPPSSV TLDFSKPSIF GTKAKSAELE FSKENFSVSL NSSFMSSAIT GDGSVSNGKI FLASAPLQPV NSSGKPPLAG HPYRKRCLEH
201: EHSESFSGKV SGSAYGKCHC KKSRKNRMKR TVRVPAISAK IADIPPDEYS WRKYGQKPIK GSPHPRGYYK CSTFRGCPAR KHVERALDDP AMLIVTYEGE
301: HRHNQSAMQE NISSSGINDL VFASA
Arabidopsis Description
WRKY11Probable WRKY transcription factor 11 [Source:UniProtKB/Swiss-Prot;Acc:Q9SV15]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.