Factsheet for TraesCS1D01G200900.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1A01G197400.1	Wheat	nucleus	94.41	93.86
TraesCS1B01G212000.1	Wheat	nucleus	93.82	93.55
HORVU1Hr1G051260.3	Barley	nucleus	92.94	84.27
OQU92055	Sorghum	nucleus	45.59	36.3
Zm00001d030139_P001	Maize	nucleus	44.41	34.32
TraesCS5D01G564500.2	Wheat	nucleus	31.76	29.51
TraesCS6D01G247200.1	Wheat	nucleus	40.59	28.69
TraesCS3D01G227400.1	Wheat	nucleus	25.88	27.5
TraesCS3D01G289500.1	Wheat	nucleus	22.65	27.4
TraesCS2D01G443000.1	Wheat	nucleus	40.88	27.31
TraesCS1D01G431600.1	Wheat	nucleus	22.65	26.1
TraesCS7D01G336400.1	Wheat	nucleus	24.41	23.31
TraesCS4D01G320200.1	Wheat	nucleus	18.82	22.86
TraesCS4D01G320000.1	Wheat	nucleus	20.0	22.82
TraesCS3D01G281900.1	Wheat	nucleus, plastid	18.82	21.48
TraesCS5D01G382600.1	Wheat	nucleus	18.24	20.67
TraesCS5D01G071800.1	Wheat	nucleus	17.94	20.61
TraesCS2D01G269200.1	Wheat	nucleus	18.24	19.81
TraesCS2D01G431000.1	Wheat	nucleus	18.53	19.44
TraesCS4D01G068200.1	Wheat	nucleus	17.94	17.89
TraesCS5D01G070700.1	Wheat	nucleus	15.29	14.61
TraesCS5D01G390800.1	Wheat	nucleus	16.76	14.47
TraesCS5D01G451000.1	Wheat	nucleus	17.35	12.27

Protein Annotations

MapMan:15.5.22	Gene3D:2.20.25.80	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700
GO:GO:0005488	GO:GO:0006139	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	GO:GO:0043565	InterPro:IPR003657	InterPro:IPR036576	PFAM:PF03106	PFscan:PS50811
PANTHER:PTHR32096	PANTHER:PTHR32096:SF50	SMART:SM00774	SUPFAM:SSF118290	EnsemblPlantsGene:TraesCS1D01G200900	EnsemblPlants:TraesCS1D01G200900.1
InterPro:WRKY_dom	InterPro:WRKY_dom_sf	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr1D:+:283617134..283618261

Molecular Weight (calculated)

36682.0 Da

IEP (calculated)

6.610

GRAVY (calculated)

-0.539

Length

340 amino acids

Sequence
(BLAST)

001: MCDLFWLSPG EQGDLSDVVR ASLHPPHQLP TPAADDEEEE EYSSLLLEGG SGGGGLVVGH GDEQLGMVAM MMGGNITRPP SSDHHVISLH SPPATTYTRP
101: HPESLAGMLR RPGIEREGDM VVAPPPEIGD RLQHMSIVHH HRVPAAMKPR KSQSKKVVCI PAPTAAPGAS GRHSTSGEVV PSDLWAWRKY GQKPIKGSPY
201: PRGYYRCSSS KGCPARKQVE RSRTDPNMLV ITYTSDHNHP WPTQRNALAG STRPSSAAAT AKMATSSSSS LAVAAARNSS NTNVDVDCAG AHHQLKQESD
301: LDLFADMDAL NVFSSIDKIQ EDDSKQQLFD PFSSGFCDYI

Best Arabidopsis Sequence Match ( AT1G30650.1 )
(BLAST)

001: MCSVSELLDM ENFQGDLTDV VRGIGGHVLS PETPPSNIWP LPLSHPTPSP SDLNINPFGD PFVSMDDPLL QELNSITNSG YFSTVGDNNN NIHNNNGFLV
101: PKVFEEDHIK SQCSIFPRIR ISHSNIIHDS SPCNSPAMSA HVVAAAAAAS PRGIINVDTN SPRNCLLVDG TTFSSQIQIS SPRNLGLKRR KSQAKKVVCI
201: PAPAAMNSRS SGEVVPSDLW AWRKYGQKPI KGSPFPRGYY RCSSSKGCSA RKQVERSRTD PNMLVITYTS EHNHPWPIQR NALAGSTRSS TSSSSNPNPS
301: KPSTANVNSS SIGSQNTIYL PSSTTPPPTL SSSAIKDERG DDMELENVDD DDDNQIAPYR PELHDHQHQP DDFFADLEEL EGDSLSMLLS HGCGGDGKDK
401: TTASDGISNF FGWSGDNNYN NYDDQDSRSL

Arabidopsis Description

WRKY14Probable WRKY transcription factor 14 [Source:UniProtKB/Swiss-Prot;Acc:Q9SA80]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.