Factsheet for TraesCS5D01G451000.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5A01G443600.1	Wheat	nucleus	90.02	96.65
HORVU5Hr1G106570.3	Barley	nucleus	86.49	84.55
Os03t0798500-01	Rice	nucleus	48.02	60.79
KXG37354	Sorghum	nucleus	47.61	52.77
Zm00001d034475_P001	Maize	cytosol	31.18	46.15
TraesCS4D01G068200.1	Wheat	nucleus	25.78	36.36
TraesCS5D01G070700.1	Wheat	nucleus	26.82	36.24
TraesCS5D01G382600.1	Wheat	nucleus	20.79	33.33
TraesCS5D01G390800.1	Wheat	nucleus	26.2	31.98
TraesCS5D01G071800.1	Wheat	nucleus	19.54	31.76
TraesCS2D01G431000.1	Wheat	nucleus	21.21	31.48
TraesCS2D01G269200.1	Wheat	nucleus	18.71	28.75
TraesCS3D01G289500.1	Wheat	nucleus	12.06	20.64
TraesCS1D01G431600.1	Wheat	nucleus	12.27	20.0
KRH15403	Soybean	cytosol, nucleus, plastid	11.02	19.2
TraesCS3D01G227400.1	Wheat	nucleus	12.27	18.44
TraesCS4D01G320200.1	Wheat	nucleus	10.39	17.86
TraesCS1D01G200900.1	Wheat	nucleus	12.27	17.35
TraesCS5D01G564500.2	Wheat	nucleus	13.1	17.21
TraesCS4D01G320000.1	Wheat	nucleus	10.39	16.78
TraesCS3D01G281900.1	Wheat	nucleus, plastid	10.39	16.78
TraesCS7D01G336400.1	Wheat	nucleus	11.23	15.17
TraesCS6D01G247200.1	Wheat	nucleus	12.68	12.68
TraesCS2D01G443000.1	Wheat	nucleus	12.27	11.59

Protein Annotations

MapMan:15.5.22	Gene3D:2.20.25.80	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700
GO:GO:0005488	GO:GO:0006139	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	GO:GO:0043565	InterPro:IPR003657	InterPro:IPR036576	PFAM:PF03106	PFAM:PF10533
PFscan:PS50811	PANTHER:PTHR31282	PANTHER:PTHR31282:SF12	SMART:SM00774	SUPFAM:SSF118290	EnsemblPlantsGene:TraesCS5D01G451000
EnsemblPlants:TraesCS5D01G451000.1	InterPro:WRKY_dom	InterPro:WRKY_dom_sf	InterPro:Zn-cluster-dom	SEG:seg	:

Description

No Description!

Coordinates

chr5D:+:499410422..499412229

Molecular Weight (calculated)

51699.4 Da

IEP (calculated)

9.452

GRAVY (calculated)

-0.504

Length

481 amino acids

Sequence
(BLAST)

001: MEGVEEANRA AVVSCKRLVA RLSLSAGDPF RLAAVAAETE EAVSRFSKVV NILGNRVGHA RARVGRRSSP AGDPIARCLL EYHPPPPVPY CPPASAPQLH
101: GSSSSTPAPP PTPLKQMPVP VAAEAAPCAA GNGKVVAPAA KGAADRDMFF QTPLLDLSAC SSVTPASIAA AQINGSRVSA APAAKGADRD MFFQTPLLDL
201: SGCSVTPASI AAVQINGSRV SAAPAANPPP PPPPPPPPQI QFHHPIQQQQ QQQQQKRMLE QQQKPASSDN KRFHFEPKPA SEKPFHIEIP AARSGKEPEV
301: ITFSFDNSVC TSSAATSFFT NMSSQLISMS ETSACAPASR KAAHKADDDG KCHCPKKKKP REKRVVRMPA VSDKVADIPS DSYSWRKYGQ KPIKGSPHPR
401: GYYRCSSIKD CPARKHVERC RGDAGMLIVT YENDHNHAQP LDLATLTANS EACRDRRYQK NSEFLCHGWN MPFSLTKSEC K

Best Arabidopsis Sequence Match ( AT4G24240.1 )
(BLAST)

001: MTVELMMSSY SGGGGGGDGF PAIAAAAKME DTALREAASA GIHGVEEFLK LIGQSQQPTE KSQTEITAVT DVAVNSFKKV ISLLGRSRTG HARFRRAPAS
101: TQTPFKQTPV VEEEVEVEEK KPETSSVLTK QKTEQYHGGG SAFRVYCPTP IHRRPPLSHN NNNNQNQTKN GSSSSSPPML ANGAPSTINF APSPPVSATN
201: SFMSSHRCDT DSTHMSSGFE FTNPSQLSGS RGKPPLSSAS LKRRCNSSPS SRCHCSKKRK SRVKRVIRVP AVSSKMADIP SDEFSWRKYG QKPIKGSPHP
301: RGYYKCSSVR GCPARKHVER ALDDAMMLIV TYEGDHNHAL VLETTTMNHD KTL

Arabidopsis Description

WRKY7Probable WRKY transcription factor 7 [Source:UniProtKB/Swiss-Prot;Acc:Q9STX0]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.