Factsheet for TraesCS5A01G443600.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5D01G451000.1	Wheat	nucleus	96.65	90.02
HORVU5Hr1G106570.3	Barley	nucleus	91.07	82.93
Os03t0798500-01	Rice	nucleus	51.34	60.53
KXG37354	Sorghum	nucleus	50.67	52.3
Zm00001d034475_P001	Maize	cytosol	33.04	45.54
TraesCS5A01G059100.1	Wheat	nucleus	28.35	35.77
TraesCS4A01G246000.2	Wheat	nucleus	27.68	35.53
TraesCS5A01G381000.1	Wheat	nucleus	27.68	31.23
TraesCS5A01G373100.1	Wheat	nucleus	20.54	30.87
TraesCS5A01G060200.1	Wheat	nucleus	20.31	30.85
TraesCS2A01G433000.1	Wheat	nucleus	21.88	29.88
TraesCS2A01G270200.2	Wheat	nucleus	19.64	27.5
TraesCS3A01G289700.2	Wheat	nucleus	12.72	19.86
KRH15403	Soybean	cytosol, nucleus, plastid	12.05	19.57
TraesCS5A01G495800.1	Wheat	nucleus	11.83	17.97
TraesCS3A01G229300.1	Wheat	nucleus	12.5	17.72
TraesCS4A01G320800.2	Wheat	nucleus	14.06	17.07
TraesCS1A01G197400.1	Wheat	nucleus	12.95	16.96
TraesCS3A01G281900.1	Wheat	nucleus	10.94	16.44
TraesCS7A01G343000.2	Wheat	nucleus	11.61	14.61
TraesCS6A01G267500.1	Wheat	nucleus	13.17	12.27
TraesCS2A01G443800.1	Wheat	nucleus	13.17	11.59

Protein Annotations

MapMan:15.5.22	Gene3D:2.20.25.80	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700
GO:GO:0005488	GO:GO:0006139	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	GO:GO:0043565	InterPro:IPR003657	InterPro:IPR036576	PFAM:PF03106	PFAM:PF10533
PFscan:PS50811	PANTHER:PTHR31282	PANTHER:PTHR31282:SF12	SMART:SM00774	SUPFAM:SSF118290	EnsemblPlantsGene:TraesCS5A01G443600
EnsemblPlants:TraesCS5A01G443600.1	InterPro:WRKY_dom	InterPro:WRKY_dom_sf	InterPro:Zn-cluster-dom	SEG:seg	:

Description

No Description!

Coordinates

chr5A:+:623565471..623567193

Molecular Weight (calculated)

47892.8 Da

IEP (calculated)

9.660

GRAVY (calculated)

-0.480

Length

448 amino acids

Sequence
(BLAST)

001: MEGVEEANRA AVVSCKRLVA RLSLSAGDPF RLAAVAAETE EAVSRFSKVV NILGNRVGHA RARVGRRSSP PADPIARCLL EYHPPPPVPY CPPASAPQLH
101: GSSSSTPAPP PTPLKQMPVP VAAAAPCAAG NGKVVAPAAK GAADRDMFFQ TPLLDLSACS SVTPASIAAA QINGSRLSAA PAAKAPDRDM FFQTPILDLS
201: GCTPASIAAV QINGSRVSAA PAANPPPAPP PPPQIQFHHQ IPQQQQQQQP QKRILEQQQR PASSDNKRFH FEPKPASEKP FHIEIPAARS GKEPEVITFS
301: FDNSVCTSSA ATSFFTNMSS QLITMSETSA CAPASRKAAH KADDDGKCHC PKKKKPREKR VVRMPAVSDK VADIPSDSYS WRKYGQKPIK GSPHPRGYYR
401: CSSIKDYPAR KHVERCRGDA GMLNVTYEND HNHAQPLDLA TLTANSEA

Best Arabidopsis Sequence Match ( AT4G24240.1 )
(BLAST)

001: MTVELMMSSY SGGGGGGDGF PAIAAAAKME DTALREAASA GIHGVEEFLK LIGQSQQPTE KSQTEITAVT DVAVNSFKKV ISLLGRSRTG HARFRRAPAS
101: TQTPFKQTPV VEEEVEVEEK KPETSSVLTK QKTEQYHGGG SAFRVYCPTP IHRRPPLSHN NNNNQNQTKN GSSSSSPPML ANGAPSTINF APSPPVSATN
201: SFMSSHRCDT DSTHMSSGFE FTNPSQLSGS RGKPPLSSAS LKRRCNSSPS SRCHCSKKRK SRVKRVIRVP AVSSKMADIP SDEFSWRKYG QKPIKGSPHP
301: RGYYKCSSVR GCPARKHVER ALDDAMMLIV TYEGDHNHAL VLETTTMNHD KTL

Arabidopsis Description

WRKY7Probable WRKY transcription factor 7 [Source:UniProtKB/Swiss-Prot;Acc:Q9STX0]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.