Factsheet for TraesCS3A01G229300.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3D01G227400.1	Wheat	nucleus	97.15	95.94
TraesCS3B01G255400.1	Wheat	nucleus	94.3	93.42
HORVU3Hr1G055910.5	Barley	plastid	89.56	64.03
Os01t0624700-01	Rice	nucleus	67.09	60.92
Zm00001d044171_P001	Maize	nucleus	61.39	56.23
Zm00001d011403_P001	Maize	nucleus	58.23	52.72
EES03310	Sorghum	nucleus, plastid	63.92	48.91
TraesCS5A01G495800.1	Wheat	nucleus	36.71	39.32
GSMUA_Achr5P09430_001	Banana	nucleus	31.96	29.71
GSMUA_Achr9P05460_001	Banana	nucleus	33.54	29.12
GSMUA_Achr6P31840_001	Banana	nucleus	33.23	27.27
GSMUA_Achr1P05010_001	Banana	nucleus	31.01	26.56
TraesCS1A01G197400.1	Wheat	nucleus	27.85	25.73
TraesCS7A01G343000.2	Wheat	nucleus	27.85	24.72
TraesCS3A01G289700.2	Wheat	nucleus	21.84	24.04
TraesCS4A01G320800.2	Wheat	nucleus	25.95	22.22
TraesCS3A01G281900.1	Wheat	nucleus	19.94	21.14
TraesCS5A01G373100.1	Wheat	nucleus	19.94	21.14
TraesCS5A01G060200.1	Wheat	nucleus	19.3	20.68
CDY72268	Canola	cytosol, plastid	6.65	20.39
TraesCS2A01G270200.2	Wheat	nucleus	20.25	20.0
TraesCS6A01G267500.1	Wheat	nucleus	28.8	18.92
TraesCS2A01G433000.1	Wheat	nucleus	19.62	18.9
TraesCS2A01G443800.1	Wheat	nucleus	30.38	18.86
TraesCS4A01G246000.2	Wheat	nucleus	17.72	16.05
TraesCS5A01G059100.1	Wheat	nucleus	17.72	15.77
TraesCS5A01G381000.1	Wheat	nucleus	18.67	14.86
TraesCS5A01G443600.1	Wheat	nucleus	17.72	12.5

Protein Annotations

MapMan:15.5.22	Gene3D:2.20.25.80	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700
GO:GO:0005488	GO:GO:0006139	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	GO:GO:0043565	InterPro:IPR003657	InterPro:IPR036576	PFAM:PF03106	PFscan:PS50811
PANTHER:PTHR32096	PANTHER:PTHR32096:SF23	SMART:SM00774	SUPFAM:SSF118290	EnsemblPlantsGene:TraesCS3A01G229300	EnsemblPlants:TraesCS3A01G229300.1
InterPro:WRKY_dom	InterPro:WRKY_dom_sf	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr3A:+:429321233..429323147

Molecular Weight (calculated)

34205.2 Da

IEP (calculated)

6.898

GRAVY (calculated)

-0.595

Length

316 amino acids

Sequence
(BLAST)

001: MCGLLLRMEH LNDWDLQAVV RSCATFSSSR HPQDRAGPPP GTAAAPVPET PVKREPRDVV RPASSPYGLE YLDLDHKPFL LSAPSSQSWA AVDDRHEMMI
101: SFPAAASTSG VRPRVPPGRK PGMRSSTPRP KRSKKSQLKK VVCEVPVADG GVSSDLWAWR KYGQKPIKGS PYPRGYYKCS SMKGCMARKL VERSPAKPGV
201: LVITYMADHC HPVPTQINAL AGTTRHKTTP ADGHAGTTTT TSPKSHGDAH EAVRCDDESN ETSSMAVDGA TEDAAGDDGG EFWPTELDLD ELLAPVDGDL
301: DHVFDEDDAL GRRLSL

Best Arabidopsis Sequence Match ( AT5G52830.1 )
(BLAST)

001: MSSEDWDLFA VVRSCSSSVS TTNSCAGHED DIGNCKQQQD PPPPPLFQAS SSCNELQDSC KPFLPVTTTT TTTWSPPPLL PPPKASSPSP NILLKQEQVL
101: LESQDQKPPL SVRVFPPSTS SSVFVFRGQR DQLLQQQSQP PLRSRKRKNQ QKRTICHVTQ ENLSSDLWAW RKYGQKPIKG SPYPRNYYRC SSSKGCLARK
201: QVERSNLDPN IFIVTYTGEH THPRPTHRNS LAGSTRNKSQ PVNPVPKPDT SPLSDTVKEE IHLSPTTPLK GNDDVQETNG DEDMVGQEVN MEEEEEEEEV
301: EEDDEEEEDD DDVDDLLIPN LAVRDRDDLF FAGSFPSWSA GSAGDGGG

Arabidopsis Description

WRKY27Probable WRKY transcription factor 27 [Source:UniProtKB/Swiss-Prot;Acc:Q9FLX8]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.