Factsheet for TraesCS3B01G255400.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3D01G227400.1	Wheat	nucleus	94.67	94.38
TraesCS3A01G229300.1	Wheat	nucleus	93.42	94.3
HORVU3Hr1G055910.5	Barley	plastid	89.34	64.48
Os01t0624700-01	Rice	nucleus	67.08	61.49
Zm00001d044171_P001	Maize	nucleus	62.38	57.68
Zm00001d011403_P001	Maize	nucleus	58.62	53.58
TraesCS1B01G455000.1	Wheat	nucleus	48.9	52.17
EES03310	Sorghum	nucleus, plastid	64.26	49.64
GSMUA_Achr5P09430_001	Banana	nucleus	31.35	29.41
GSMUA_Achr9P05460_001	Banana	nucleus	32.92	28.85
GSMUA_Achr1P05010_001	Banana	nucleus	31.03	26.83
GSMUA_Achr6P31840_001	Banana	nucleus	32.29	26.75
TraesCS1B01G212000.1	Wheat	nucleus	27.9	26.1
TraesCS3B01G324400.1	Wheat	nucleus	21.94	24.31
TraesCS7B01G240000.1	Wheat	nucleus	26.96	24.29
TraesCS5B01G558100.2	Wheat	nucleus	25.71	22.1
TraesCS3B01G315600.1	Wheat	cytosol	20.38	21.89
TraesCS5B01G067700.1	Wheat	nucleus	19.75	21.14
TraesCS5B01G375100.1	Wheat	nucleus	19.44	20.74
CDY72268	Canola	cytosol, plastid	6.58	20.39
TraesCS2B01G454300.1	Wheat	nucleus	19.44	19.81
TraesCS6B01G294900.1	Wheat	nucleus	29.15	19.25
TraesCS2B01G465000.1	Wheat	nucleus	30.41	19.25
TraesCS4B01G069500.2	Wheat	nucleus	17.24	16.18
TraesCS5B01G066400.1	Wheat	nucleus	17.55	15.77
TraesCS5B01G384600.1	Wheat	nucleus	18.81	15.0

Protein Annotations

MapMan:15.5.22	Gene3D:2.20.25.80	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700
GO:GO:0005488	GO:GO:0006139	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	GO:GO:0043565	InterPro:IPR003657	InterPro:IPR036576	PFAM:PF03106	PFscan:PS50811
PANTHER:PTHR32096	PANTHER:PTHR32096:SF23	SMART:SM00774	SUPFAM:SSF118290	EnsemblPlantsGene:TraesCS3B01G255400	EnsemblPlants:TraesCS3B01G255400.1
InterPro:WRKY_dom	InterPro:WRKY_dom_sf	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr3B:-:411844098..411845906

Molecular Weight (calculated)

34522.6 Da

IEP (calculated)

6.644

GRAVY (calculated)

-0.581

Length

319 amino acids

Sequence
(BLAST)

001: MCGLLLRMEH LNDWDLQAVV RSCATFSSSH HPQEEDRAGP PPGPAAAPPA DTPVKREPRD VVRPASAAKD ASSLYGLEYL DLDHKPFLLS APSSQSWAAV
101: DDRHEMMISF PAAASTSGVR PRVPPGRKPG IRSSTPRPKR SKKSQLKKVV CEVPVADGGV SSDLWAWRKY GQKPIKGSPY PRGYYKCSSM KGCMARKLVE
201: RSPAKPGVLV ITYMADHCHP VPTQINALAG TTRHKTTPAD GHATTPKSHG DAHEAVRCED ESNEMSSMAV DGTTEEAAGD DGGEFWPTEL DLDELLAPVD
301: GDLDHVFDED GALGRRLSL

Best Arabidopsis Sequence Match ( AT5G52830.1 )
(BLAST)

001: MSSEDWDLFA VVRSCSSSVS TTNSCAGHED DIGNCKQQQD PPPPPLFQAS SSCNELQDSC KPFLPVTTTT TTTWSPPPLL PPPKASSPSP NILLKQEQVL
101: LESQDQKPPL SVRVFPPSTS SSVFVFRGQR DQLLQQQSQP PLRSRKRKNQ QKRTICHVTQ ENLSSDLWAW RKYGQKPIKG SPYPRNYYRC SSSKGCLARK
201: QVERSNLDPN IFIVTYTGEH THPRPTHRNS LAGSTRNKSQ PVNPVPKPDT SPLSDTVKEE IHLSPTTPLK GNDDVQETNG DEDMVGQEVN MEEEEEEEEV
301: EEDDEEEEDD DDVDDLLIPN LAVRDRDDLF FAGSFPSWSA GSAGDGGG

Arabidopsis Description

WRKY27Probable WRKY transcription factor 27 [Source:UniProtKB/Swiss-Prot;Acc:Q9FLX8]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.